RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
VPS51-217ENST00000639871 CCDC180Q9P1Z9 1646 aa39.34■■■■□ 3.89
VPS51-217ENST00000639871 ABCC9O60706 1549 aa39.15■■■■□ 3.86
VPS51-217ENST00000639871 RB1CC1Q8TDY2 1594 aa37.36■■■■□ 3.57
VPS51-217ENST00000639871 NACADO15069 1562 aa37.2■■■■□ 3.55
VPS51-217ENST00000639871 DCAF8L2P0C7V8 631 aa36.89■■■■□ 3.5
VPS51-217ENST00000639871 MYO15BQ96JP2 1530 aa36.85■■■■□ 3.49
VPS51-217ENST00000639871 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
VPS51-217ENST00000639871 ZCCHC6Q5VYS8 1495 aaKnown RBP36.51■■■■□ 3.44
VPS51-217ENST00000639871 PABPN1Q86U42 306 aaKnown RBP eCLIP36.49■■■■□ 3.43
VPS51-217ENST00000639871 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
VPS51-217ENST00000639871 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
VPS51-217ENST00000639871 BICRAQ9NZM4 1560 aa36.32■■■■□ 3.41
VPS51-217ENST00000639871 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
VPS51-217ENST00000639871 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
VPS51-217ENST00000639871 CC2D2AQ9P2K1 1620 aa35.39■■■■□ 3.26
VPS51-217ENST00000639871 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
VPS51-217ENST00000639871 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
VPS51-217ENST00000639871 NCAPD3P42695 1498 aa34.4■■■■□ 3.1
VPS51-217ENST00000639871 ATAD2BQ9ULI0 1458 aa34.28■■■■□ 3.08
VPS51-217ENST00000639871 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
VPS51-217ENST00000639871 SMARCA2P51531 1590 aa34.15■■■■□ 3.06
VPS51-217ENST00000639871 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
VPS51-217ENST00000639871 HMGXB3Q12766 1538 aa34.1■■■■□ 3.05
VPS51-217ENST00000639871 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
VPS51-217ENST00000639871 BAZ1BQ9UIG0 1483 aaKnown RBP33.89■■■■□ 3.02
VPS51-217ENST00000639871 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
VPS51-217ENST00000639871 ERCC6Q03468 1493 aa33.76■■■□□ 2.99
VPS51-217ENST00000639871 CUX2O14529 1486 aa33.73■■■□□ 2.99
VPS51-217ENST00000639871 NESP48681 1621 aa33.7■■■□□ 2.99
VPS51-217ENST00000639871 DNAJC5Q9H3Z4 198 aa33.55■■■□□ 2.96
VPS51-217ENST00000639871 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.96
VPS51-217ENST00000639871 WIZO95785 1651 aa33.41■■■□□ 2.94
VPS51-217ENST00000639871 PDS5BQ9NTI5 1447 aa33.33■■■□□ 2.93
VPS51-217ENST00000639871 THOC2Q8NI27 1593 aaKnown RBP33.33■■■□□ 2.93
VPS51-217ENST00000639871 CADPSQ9ULU8 1353 aa33.33■■■□□ 2.93
VPS51-217ENST00000639871 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
VPS51-217ENST00000639871 KIF21AQ7Z4S6 1674 aa33.2■■■□□ 2.9
VPS51-217ENST00000639871 TOP2AP11388 1531 aaKnown RBP33.06■■■□□ 2.88
VPS51-217ENST00000639871 MRC2Q9UBG0 1479 aa33.02■■■□□ 2.88
VPS51-217ENST00000639871 CFTRP13569 1480 aa33■■■□□ 2.87
VPS51-217ENST00000639871 WDR62O43379 1518 aa32.96■■■□□ 2.87
VPS51-217ENST00000639871 FANCD2Q9BXW9 1451 aa32.9■■■□□ 2.86
VPS51-217ENST00000639871 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
VPS51-217ENST00000639871 CCDC88BA6NC98 1476 aa32.7■■■□□ 2.83
VPS51-217ENST00000639871 URB2Q14146 1524 aaKnown RBP32.64■■■□□ 2.82
VPS51-217ENST00000639871 PRDM2Q13029 1718 aa32.51■■■□□ 2.79
VPS51-217ENST00000639871 TOPBP1Q92547 1522 aa32.31■■■□□ 2.76
VPS51-217ENST00000639871 IFT140Q96RY7 1462 aa32.28■■■□□ 2.76
VPS51-217ENST00000639871 ABCC8Q09428 1581 aa32.27■■■□□ 2.76
VPS51-217ENST00000639871 OSCARQ8IYS5 282 aa32.21■■■□□ 2.75
VPS51-217ENST00000639871 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
VPS51-217ENST00000639871 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
VPS51-217ENST00000639871 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
VPS51-217ENST00000639871 POLA1P09884 1462 aaPredicted RBP32■■■□□ 2.71
VPS51-217ENST00000639871 TRIM41Q8WV44 630 aa31.99■■■□□ 2.71
VPS51-217ENST00000639871 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
VPS51-217ENST00000639871 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
VPS51-217ENST00000639871 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
VPS51-217ENST00000639871 SOGA1O94964 1423 aa31.84■■■□□ 2.69
VPS51-217ENST00000639871 CUX1P39880 1505 aa31.81■■■□□ 2.68
VPS51-217ENST00000639871 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
VPS51-217ENST00000639871 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
VPS51-217ENST00000639871 TDRD9Q8NDG6 1382 aaKnown RBP31.75■■■□□ 2.67
VPS51-217ENST00000639871 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
VPS51-217ENST00000639871 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
VPS51-217ENST00000639871 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
VPS51-217ENST00000639871 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
VPS51-217ENST00000639871 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
VPS51-217ENST00000639871 CHD1O14646 1710 aa31.63■■■□□ 2.65
VPS51-217ENST00000639871 FBLN2P98095 1184 aa31.58■■■□□ 2.65
VPS51-217ENST00000639871 SNAPC4Q5SXM2 1469 aa31.58■■■□□ 2.65
VPS51-217ENST00000639871 GRIN2BQ13224 1484 aa31.55■■■□□ 2.64
VPS51-217ENST00000639871 MAGI1Q96QZ7 1491 aaPredicted RBP31.54■■■□□ 2.64
VPS51-217ENST00000639871 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
VPS51-217ENST00000639871 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
VPS51-217ENST00000639871 CHMP7Q8WUX9 453 aaPredicted RBP31.44■■■□□ 2.62
VPS51-217ENST00000639871 SYNJ2O15056 1496 aa31.43■■■□□ 2.62
VPS51-217ENST00000639871 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
VPS51-217ENST00000639871 CYB5RLQ6IPT4 315 aa31.4■■■□□ 2.62
VPS51-217ENST00000639871 ARAP1Q96P48 1450 aa31.4■■■□□ 2.62
VPS51-217ENST00000639871 ABCA5Q8WWZ7 1642 aa31.39■■■□□ 2.62
VPS51-217ENST00000639871 WRNQ14191 1432 aaPredicted RBP eCLIP31.37■■■□□ 2.61
VPS51-217ENST00000639871 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
VPS51-217ENST00000639871 TOP2BQ02880 1626 aa31.34■■■□□ 2.61
VPS51-217ENST00000639871 PBRM1Q86U86 1689 aa31.32■■■□□ 2.6
VPS51-217ENST00000639871 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
VPS51-217ENST00000639871 GRIN2AQ12879 1464 aa31.14■■■□□ 2.58
VPS51-217ENST00000639871 ADAMTS12P58397 1594 aa31.12■■■□□ 2.57
VPS51-217ENST00000639871 FHAD1B1AJZ9 1412 aa31.09■■■□□ 2.57
VPS51-217ENST00000639871 NUP160Q12769 1436 aa31.09■■■□□ 2.57
VPS51-217ENST00000639871 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
VPS51-217ENST00000639871 CEP170Q5SW79 1584 aa31■■■□□ 2.55
VPS51-217ENST00000639871 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
VPS51-217ENST00000639871 ERCC6L2Q5T890 1561 aa30.9■■■□□ 2.54
VPS51-217ENST00000639871 SHROOM2Q13796 1616 aa30.88■■■□□ 2.53
VPS51-217ENST00000639871 IGF1RP08069 1367 aa30.77■■■□□ 2.52
VPS51-217ENST00000639871 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
VPS51-217ENST00000639871 JPH4Q96JJ6 628 aa30.73■■■□□ 2.51
VPS51-217ENST00000639871 PRG4Q92954 1404 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms