RNA–Protein interactions for RNA: ENST00000639639.1

GLDC-216, Transcript of glycine decarboxylase, humanhuman

TSL 3 BASIC

Gene GLDC, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLDC-216ENST00000639639 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
GLDC-216ENST00000639639 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
GLDC-216ENST00000639639 ABCC9O60706 1549 aa27.73■■■□□ 2.03
GLDC-216ENST00000639639 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
GLDC-216ENST00000639639 NACADO15069 1562 aa26.24■■□□□ 1.79
GLDC-216ENST00000639639 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
GLDC-216ENST00000639639 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
GLDC-216ENST00000639639 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
GLDC-216ENST00000639639 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
GLDC-216ENST00000639639 UNC13AQ9UPW8 1703 aa25.79■■□□□ 1.72
GLDC-216ENST00000639639 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
GLDC-216ENST00000639639 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
GLDC-216ENST00000639639 DCAF1Q9Y4B6 1507 aa25.56■■□□□ 1.68
GLDC-216ENST00000639639 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
GLDC-216ENST00000639639 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
GLDC-216ENST00000639639 CC2D2AQ9P2K1 1620 aa25.06■■□□□ 1.6
GLDC-216ENST00000639639 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
GLDC-216ENST00000639639 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
GLDC-216ENST00000639639 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
GLDC-216ENST00000639639 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
GLDC-216ENST00000639639 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
GLDC-216ENST00000639639 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
GLDC-216ENST00000639639 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
GLDC-216ENST00000639639 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
GLDC-216ENST00000639639 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
GLDC-216ENST00000639639 CUX2O14529 1486 aa23.95■■□□□ 1.42
GLDC-216ENST00000639639 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
GLDC-216ENST00000639639 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
GLDC-216ENST00000639639 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.41
GLDC-216ENST00000639639 NESP48681 1621 aa23.83■■□□□ 1.4
GLDC-216ENST00000639639 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
GLDC-216ENST00000639639 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
GLDC-216ENST00000639639 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
GLDC-216ENST00000639639 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
GLDC-216ENST00000639639 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
GLDC-216ENST00000639639 WIZO95785 1651 aa23.5■■□□□ 1.35
GLDC-216ENST00000639639 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
GLDC-216ENST00000639639 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.33
GLDC-216ENST00000639639 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
GLDC-216ENST00000639639 WDR62O43379 1518 aa23.29■■□□□ 1.32
GLDC-216ENST00000639639 CFTRP13569 1480 aa23.23■■□□□ 1.31
GLDC-216ENST00000639639 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
GLDC-216ENST00000639639 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
GLDC-216ENST00000639639 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.31
GLDC-216ENST00000639639 URB2Q14146 1524 aaKnown RBP23.02■■□□□ 1.28
GLDC-216ENST00000639639 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
GLDC-216ENST00000639639 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
GLDC-216ENST00000639639 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
GLDC-216ENST00000639639 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
GLDC-216ENST00000639639 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
GLDC-216ENST00000639639 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
GLDC-216ENST00000639639 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
GLDC-216ENST00000639639 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
GLDC-216ENST00000639639 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
GLDC-216ENST00000639639 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
GLDC-216ENST00000639639 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
GLDC-216ENST00000639639 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
GLDC-216ENST00000639639 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.2
GLDC-216ENST00000639639 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
GLDC-216ENST00000639639 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
GLDC-216ENST00000639639 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
GLDC-216ENST00000639639 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
GLDC-216ENST00000639639 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
GLDC-216ENST00000639639 SOGA1O94964 1423 aa22.43■■□□□ 1.18
GLDC-216ENST00000639639 CHD1O14646 1710 aa22.41■■□□□ 1.18
GLDC-216ENST00000639639 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
GLDC-216ENST00000639639 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
GLDC-216ENST00000639639 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
GLDC-216ENST00000639639 CUX1P39880 1505 aa22.36■■□□□ 1.17
GLDC-216ENST00000639639 FBLN2P98095 1184 aa22.35■■□□□ 1.17
GLDC-216ENST00000639639 CYB5RLQ6IPT4 315 aa22.29■■□□□ 1.16
GLDC-216ENST00000639639 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
GLDC-216ENST00000639639 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
GLDC-216ENST00000639639 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
GLDC-216ENST00000639639 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
GLDC-216ENST00000639639 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
GLDC-216ENST00000639639 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
GLDC-216ENST00000639639 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
GLDC-216ENST00000639639 SYNJ2O15056 1496 aa22.18■■□□□ 1.14
GLDC-216ENST00000639639 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
GLDC-216ENST00000639639 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
GLDC-216ENST00000639639 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
GLDC-216ENST00000639639 PBRM1Q86U86 1689 aa22.12■■□□□ 1.13
GLDC-216ENST00000639639 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
GLDC-216ENST00000639639 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
GLDC-216ENST00000639639 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
GLDC-216ENST00000639639 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
GLDC-216ENST00000639639 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
GLDC-216ENST00000639639 GRIN2AQ12879 1464 aa21.95■■□□□ 1.1
GLDC-216ENST00000639639 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
GLDC-216ENST00000639639 NUP160Q12769 1436 aa21.9■■□□□ 1.1
GLDC-216ENST00000639639 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
GLDC-216ENST00000639639 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
GLDC-216ENST00000639639 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
GLDC-216ENST00000639639 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
GLDC-216ENST00000639639 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
GLDC-216ENST00000639639 PRG4Q92954 1404 aaPredicted RBP21.66■■□□□ 1.06
GLDC-216ENST00000639639 JPH4Q96JJ6 628 aa21.66■■□□□ 1.06
GLDC-216ENST00000639639 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
GLDC-216ENST00000639639 IGF1RP08069 1367 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms