RNA–Protein interactions for RNA: ENST00000639521.1

STRADA-237, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-237ENST00000639521 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
STRADA-237ENST00000639521 CCDC180Q9P1Z9 1646 aa19.53■□□□□ 0.72
STRADA-237ENST00000639521 ABCC9O60706 1549 aa18.98■□□□□ 0.63
STRADA-237ENST00000639521 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
STRADA-237ENST00000639521 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
STRADA-237ENST00000639521 NACADO15069 1562 aa18.25■□□□□ 0.51
STRADA-237ENST00000639521 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
STRADA-237ENST00000639521 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
STRADA-237ENST00000639521 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
STRADA-237ENST00000639521 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
STRADA-237ENST00000639521 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
STRADA-237ENST00000639521 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
STRADA-237ENST00000639521 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
STRADA-237ENST00000639521 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
STRADA-237ENST00000639521 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
STRADA-237ENST00000639521 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
STRADA-237ENST00000639521 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
STRADA-237ENST00000639521 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
STRADA-237ENST00000639521 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
STRADA-237ENST00000639521 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
STRADA-237ENST00000639521 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
STRADA-237ENST00000639521 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
STRADA-237ENST00000639521 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
STRADA-237ENST00000639521 WIZO95785 1651 aa16.85■□□□□ 0.29
STRADA-237ENST00000639521 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
STRADA-237ENST00000639521 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
STRADA-237ENST00000639521 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
STRADA-237ENST00000639521 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
STRADA-237ENST00000639521 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
STRADA-237ENST00000639521 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
STRADA-237ENST00000639521 NESP48681 1621 aa16.49■□□□□ 0.23
STRADA-237ENST00000639521 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
STRADA-237ENST00000639521 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
STRADA-237ENST00000639521 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
STRADA-237ENST00000639521 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
STRADA-237ENST00000639521 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
STRADA-237ENST00000639521 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
STRADA-237ENST00000639521 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
STRADA-237ENST00000639521 THOC2Q8NI27 1593 aaKnown RBP16.26■□□□□ 0.19
STRADA-237ENST00000639521 CFTRP13569 1480 aa16.25■□□□□ 0.19
STRADA-237ENST00000639521 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
STRADA-237ENST00000639521 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
STRADA-237ENST00000639521 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
STRADA-237ENST00000639521 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
STRADA-237ENST00000639521 WDR62O43379 1518 aa16.08■□□□□ 0.16
STRADA-237ENST00000639521 CUX2O14529 1486 aa16.07■□□□□ 0.16
STRADA-237ENST00000639521 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
STRADA-237ENST00000639521 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
STRADA-237ENST00000639521 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
STRADA-237ENST00000639521 CUX1P39880 1505 aa15.89■□□□□ 0.13
STRADA-237ENST00000639521 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
STRADA-237ENST00000639521 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
STRADA-237ENST00000639521 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
STRADA-237ENST00000639521 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
STRADA-237ENST00000639521 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
STRADA-237ENST00000639521 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
STRADA-237ENST00000639521 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
STRADA-237ENST00000639521 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
STRADA-237ENST00000639521 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
STRADA-237ENST00000639521 IFT140Q96RY7 1462 aa15.77■□□□□ 0.11
STRADA-237ENST00000639521 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.11
STRADA-237ENST00000639521 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
STRADA-237ENST00000639521 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
STRADA-237ENST00000639521 SOGA1O94964 1423 aa15.68■□□□□ 0.1
STRADA-237ENST00000639521 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
STRADA-237ENST00000639521 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.14e-7■■■■■ 28.2
STRADA-237ENST00000639521 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
STRADA-237ENST00000639521 CHD1O14646 1710 aa15.63■□□□□ 0.09
STRADA-237ENST00000639521 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
STRADA-237ENST00000639521 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
STRADA-237ENST00000639521 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
STRADA-237ENST00000639521 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
STRADA-237ENST00000639521 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
STRADA-237ENST00000639521 ADAMTS12P58397 1594 aa15.47■□□□□ 0.07
STRADA-237ENST00000639521 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
STRADA-237ENST00000639521 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
STRADA-237ENST00000639521 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
STRADA-237ENST00000639521 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
STRADA-237ENST00000639521 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
STRADA-237ENST00000639521 FBLN2P98095 1184 aa15.37■□□□□ 0.05
STRADA-237ENST00000639521 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
STRADA-237ENST00000639521 CUL7Q14999 1698 aa15.36■□□□□ 0.05
STRADA-237ENST00000639521 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
STRADA-237ENST00000639521 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
STRADA-237ENST00000639521 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
STRADA-237ENST00000639521 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
STRADA-237ENST00000639521 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
STRADA-237ENST00000639521 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.04
STRADA-237ENST00000639521 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
STRADA-237ENST00000639521 RIMBP3CA6NJZ7 1639 aa15.3■□□□□ 0.04
STRADA-237ENST00000639521 RIMBP3BA6NNM3 1639 aa15.3■□□□□ 0.04
STRADA-237ENST00000639521 IGF1RP08069 1367 aa15.3■□□□□ 0.04
STRADA-237ENST00000639521 RIMBP3Q9UFD9 1639 aa15.3■□□□□ 0.04
STRADA-237ENST00000639521 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
STRADA-237ENST00000639521 NUP160Q12769 1436 aa15.25■□□□□ 0.03
STRADA-237ENST00000639521 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
STRADA-237ENST00000639521 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
STRADA-237ENST00000639521 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.02
STRADA-237ENST00000639521 ERCC6L2Q5T890 1561 aa15.2■□□□□ 0.02
STRADA-237ENST00000639521 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms