RNA–Protein interactions for RNA: ENST00000638751.1

KCNMA1-243, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 5

Gene KCNMA1, Length 4,939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-243	ENST00000638751	PELP1	Q8IZL8	1130 aa	Known RBP	14.12	□□□□□ -0.15
KCNMA1-243	ENST00000638751	MYT1	Q01538	1121 aa		14.12	□□□□□ -0.15
KCNMA1-243	ENST00000638751	NISCH	Q9Y2I1	1504 aa		13.65	□□□□□ -0.22
KCNMA1-243	ENST00000638751	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-243	ENST00000638751	ERICH6	Q7L0X2	663 aa		13.09	□□□□□ -0.31
KCNMA1-243	ENST00000638751	CENPB	P07199	599 aa	Predicted RBP	13.07	□□□□□ -0.32
KCNMA1-243	ENST00000638751	CCER1	Q8TC90	406 aa	Predicted RBP	12.86	□□□□□ -0.35
KCNMA1-243	ENST00000638751	PCGF6	Q9BYE7	350 aa		12.83	□□□□□ -0.36
KCNMA1-243	ENST00000638751	ZEB1	P37275	1124 aa	Predicted RBP	12.64	□□□□□ -0.39
KCNMA1-243	ENST00000638751	HRC	P23327	699 aa		12.63	□□□□□ -0.39
KCNMA1-243	ENST00000638751	YTHDC1	Q96MU7	727 aa	Known RBP	12.55	□□□□□ -0.4
KCNMA1-243	ENST00000638751	SUPT5H	O00267	1087 aa	Known RBP	12.48	□□□□□ -0.41
KCNMA1-243	ENST00000638751	NEFL	P07196	543 aa		12.44	□□□□□ -0.42
KCNMA1-243	ENST00000638751	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.35	□□□□□ -0.43
KCNMA1-243	ENST00000638751	DCAF8L2	P0C7V8	631 aa		12.34	□□□□□ -0.43
KCNMA1-243	ENST00000638751	GTF3C3	Q9Y5Q9	886 aa		12.31	□□□□□ -0.44
KCNMA1-243	ENST00000638751	RTL5	Q5HYW3	569 aa	Predicted RBP	12.29	□□□□□ -0.44
KCNMA1-243	ENST00000638751	EIF5B	O60841	1220 aa	Known RBP	12.26	□□□□□ -0.45
KCNMA1-243	ENST00000638751	EHMT2	Q96KQ7	1210 aa		12.18	□□□□□ -0.46
KCNMA1-243	ENST00000638751	GLIPR1L2	Q4G1C9	344 aa		12.18	□□□□□ -0.46
KCNMA1-243	ENST00000638751	BCL11A	Q9H165	835 aa		12.17	□□□□□ -0.46
KCNMA1-243	ENST00000638751	ACIN1	Q9UKV3	1341 aa	Known RBP	12.09	□□□□□ -0.47
KCNMA1-243	ENST00000638751	DAXX	Q9UER7	740 aa	Predicted RBP	12.09	□□□□□ -0.47
KCNMA1-243	ENST00000638751	SCAF1	Q9H7N4	1312 aa	Known RBP	12.01	□□□□□ -0.49
KCNMA1-243	ENST00000638751	TRIM26	Q12899	539 aa	Predicted RBP	12	□□□□□ -0.49
KCNMA1-243	ENST00000638751	DIEXF	Q68CQ4	756 aa	Known RBP	11.98	□□□□□ -0.49
KCNMA1-243	ENST00000638751	SHROOM4	Q9ULL8	1493 aa		11.94	□□□□□ -0.5
KCNMA1-243	ENST00000638751	MYT1L	Q9UL68	1186 aa		11.93	□□□□□ -0.5
KCNMA1-243	ENST00000638751	ANP32E	Q9BTT0	268 aa		11.9	□□□□□ -0.5
KCNMA1-243	ENST00000638751	BCAN	Q96GW7	911 aa		11.9	□□□□□ -0.51
KCNMA1-243	ENST00000638751	APLP2	Q06481	763 aa		11.87	□□□□□ -0.51
KCNMA1-243	ENST00000638751	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.83	□□□□□ -0.52
KCNMA1-243	ENST00000638751	RANGAP1	P46060	587 aa	Predicted RBP	11.81	□□□□□ -0.52
KCNMA1-243	ENST00000638751	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.81	□□□□□ -0.52
KCNMA1-243	ENST00000638751	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.8	□□□□□ -0.52
KCNMA1-243	ENST00000638751	PRKCSH	P14314	528 aa	Predicted RBP	11.79	□□□□□ -0.52
KCNMA1-243	ENST00000638751	SLC24A1	O60721	1099 aa		11.78	□□□□□ -0.52
KCNMA1-243	ENST00000638751	NEUROD1	Q13562	356 aa		11.77	□□□□□ -0.53
KCNMA1-243	ENST00000638751	NBR1	Q14596	966 aa		11.66	□□□□□ -0.54
KCNMA1-243	ENST00000638751	ANP32A	P39687	249 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-243	ENST00000638751	CLSPN	Q9HAW4	1339 aa		11.63	□□□□□ -0.55
KCNMA1-243	ENST00000638751	CCDC180	Q9P1Z9	1646 aa		11.61	□□□□□ -0.55
KCNMA1-243	ENST00000638751	RTN4	Q9NQC3	1192 aa	Known RBP	11.61	□□□□□ -0.55
KCNMA1-243	ENST00000638751	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.58	□□□□□ -0.56
KCNMA1-243	ENST00000638751	CSRNP3	Q8WYN3	585 aa		11.52	□□□□□ -0.57
KCNMA1-243	ENST00000638751	FKBP8	Q14318	412 aa		11.49	□□□□□ -0.57
KCNMA1-243	ENST00000638751	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.49	□□□□□ -0.57
KCNMA1-243	ENST00000638751	TNNT2	P45379	298 aa	Predicted RBP	11.47	□□□□□ -0.57
KCNMA1-243	ENST00000638751	NPM2	Q86SE8	214 aa	Known RBP	11.46	□□□□□ -0.58
KCNMA1-243	ENST00000638751	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.44	□□□□□ -0.58
KCNMA1-243	ENST00000638751	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.44	□□□□□ -0.58
KCNMA1-243	ENST00000638751	PODXL2	Q9NZ53	605 aa		11.43	□□□□□ -0.58
KCNMA1-243	ENST00000638751	DEK	P35659	375 aa	Known RBP	11.43	□□□□□ -0.58
KCNMA1-243	ENST00000638751	CCDC136	Q96JN2	1154 aa		11.43	□□□□□ -0.58
KCNMA1-243	ENST00000638751	CDK11B	P21127	795 aa	Known RBP	11.42	□□□□□ -0.58
KCNMA1-243	ENST00000638751	LOC105371045	A0A1W2PR82	267 aa		11.41	□□□□□ -0.58
KCNMA1-243	ENST00000638751	ERICH6B	Q5W0A0	696 aa		11.41	□□□□□ -0.58
KCNMA1-243	ENST00000638751	TRIM41	Q8WV44	630 aa		11.41	□□□□□ -0.58
KCNMA1-243	ENST00000638751	ANP32B	Q92688	251 aa	Known RBP	11.38	□□□□□ -0.59
KCNMA1-243	ENST00000638751	NEFM	P07197	916 aa		11.37	□□□□□ -0.59
KCNMA1-243	ENST00000638751	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.37	□□□□□ -0.59
KCNMA1-243	ENST00000638751	PKNOX2	Q96KN3	472 aa		11.35	□□□□□ -0.59
KCNMA1-243	ENST00000638751	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.33	□□□□□ -0.6
KCNMA1-243	ENST00000638751	ARX	Q96QS3	562 aa		11.32	□□□□□ -0.6
KCNMA1-243	ENST00000638751	VSIG10	Q8N0Z9	540 aa		11.32	□□□□□ -0.6
KCNMA1-243	ENST00000638751	NCL	P19338	710 aa	Known RBP	11.32	□□□□□ -0.6
KCNMA1-243	ENST00000638751	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.31	□□□□□ -0.6
KCNMA1-243	ENST00000638751		A0A0U1RQG5	324 aa	Predicted RBP	11.29	□□□□□ -0.6
KCNMA1-243	ENST00000638751	ITGAE	P38570	1179 aa		11.29	□□□□□ -0.6
KCNMA1-243	ENST00000638751	CNGB1	Q14028	1251 aa	Predicted RBP	11.29	□□□□□ -0.6
KCNMA1-243	ENST00000638751	CHIC1	Q5VXU3	224 aa		11.27	□□□□□ -0.61
KCNMA1-243	ENST00000638751	ANP32C	O43423	234 aa		11.25	□□□□□ -0.61
KCNMA1-243	ENST00000638751	TRIM44	Q96DX7	344 aa	Predicted RBP	11.24	□□□□□ -0.61
KCNMA1-243	ENST00000638751	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.24	□□□□□ -0.61
KCNMA1-243	ENST00000638751	POLR3GL	Q9BT43	218 aa		11.24	□□□□□ -0.61
KCNMA1-243	ENST00000638751	UBTF	P17480	764 aa	Known RBP	11.23	□□□□□ -0.61
KCNMA1-243	ENST00000638751	HSP90AA1	P07900	732 aa	Known RBP	11.21	□□□□□ -0.62
KCNMA1-243	ENST00000638751	DCAF1	Q9Y4B6	1507 aa		11.2	□□□□□ -0.62
KCNMA1-243	ENST00000638751	NOP58	Q9Y2X3	529 aa	Known RBP	11.17	□□□□□ -0.62
KCNMA1-243	ENST00000638751	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.16	□□□□□ -0.62
KCNMA1-243	ENST00000638751	RBM19	Q9Y4C8	960 aa	Known RBP	11.15	□□□□□ -0.62
KCNMA1-243	ENST00000638751	PPM1G	O15355	546 aa	Predicted RBP	11.15	□□□□□ -0.62
KCNMA1-243	ENST00000638751	MIER1	Q8N108	512 aa		11.15	□□□□□ -0.62
KCNMA1-243	ENST00000638751	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.14	□□□□□ -0.63
KCNMA1-243	ENST00000638751	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.13	□□□□□ -0.63
KCNMA1-243	ENST00000638751	ZNF326	Q5BKZ1	582 aa	Known RBP	11.13	□□□□□ -0.63
KCNMA1-243	ENST00000638751	TSHZ2	Q9NRE2	1034 aa		11.11	□□□□□ -0.63
KCNMA1-243	ENST00000638751	RSPH6A	Q9H0K4	717 aa		11.1	□□□□□ -0.63
KCNMA1-243	ENST00000638751	LAS1L	Q9Y4W2	734 aa	Known RBP	11.1	□□□□□ -0.63
KCNMA1-243	ENST00000638751	ABCC9	O60706	1549 aa		11.09	□□□□□ -0.63
KCNMA1-243	ENST00000638751	TIMELESS	Q9UNS1	1208 aa		11.08	□□□□□ -0.64
KCNMA1-243	ENST00000638751	IRX6	P78412	446 aa	Predicted RBP	11.06	□□□□□ -0.64
KCNMA1-243	ENST00000638751	PNN	Q9H307	717 aa	Known RBP	11.06	□□□□□ -0.64
KCNMA1-243	ENST00000638751	TRIM52	Q96A61	297 aa		11.05	□□□□□ -0.64
KCNMA1-243	ENST00000638751	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
KCNMA1-243	ENST00000638751	SALL2	Q9Y467	1007 aa	Predicted RBP	11.05	□□□□□ -0.64
KCNMA1-243	ENST00000638751	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.04	□□□□□ -0.64
KCNMA1-243	ENST00000638751	DDRGK1	Q96HY6	314 aa		11.04	□□□□□ -0.64
KCNMA1-243	ENST00000638751	UPF2	Q9HAU5	1272 aa	Known RBP	11.02	□□□□□ -0.65
KCNMA1-243	ENST00000638751	NACAD	O15069	1562 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms