RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-231ENST00000638708 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
STRADA-231ENST00000638708 HRCP23327 699 aa18.86■□□□□ 0.61
STRADA-231ENST00000638708 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
STRADA-231ENST00000638708 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
STRADA-231ENST00000638708 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
STRADA-231ENST00000638708 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
STRADA-231ENST00000638708 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
STRADA-231ENST00000638708 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
STRADA-231ENST00000638708 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.5
STRADA-231ENST00000638708 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
STRADA-231ENST00000638708 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
STRADA-231ENST00000638708 MYT1Q01538 1121 aa17.88■□□□□ 0.45
STRADA-231ENST00000638708 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
STRADA-231ENST00000638708 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
STRADA-231ENST00000638708 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
STRADA-231ENST00000638708 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
STRADA-231ENST00000638708 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
STRADA-231ENST00000638708 ACIN1Q9UKV3 1341 aaKnown RBP17.41■□□□□ 0.38
STRADA-231ENST00000638708 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
STRADA-231ENST00000638708 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
STRADA-231ENST00000638708 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.34
STRADA-231ENST00000638708 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
STRADA-231ENST00000638708 ABCC9O60706 1549 aa17.05■□□□□ 0.32
STRADA-231ENST00000638708 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
STRADA-231ENST00000638708 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
STRADA-231ENST00000638708 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.3
STRADA-231ENST00000638708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
STRADA-231ENST00000638708 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
STRADA-231ENST00000638708 NACADO15069 1562 aa16.82■□□□□ 0.28
STRADA-231ENST00000638708 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
STRADA-231ENST00000638708 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
STRADA-231ENST00000638708 FAM9AQ8IZU1 332 aaPredicted RBP16.75■□□□□ 0.27
STRADA-231ENST00000638708 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
STRADA-231ENST00000638708 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
STRADA-231ENST00000638708 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
STRADA-231ENST00000638708 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
STRADA-231ENST00000638708 YTHDC1Q96MU7 727 aaKnown RBP16.6■□□□□ 0.25
STRADA-231ENST00000638708 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
STRADA-231ENST00000638708 MIER1Q8N108 512 aa16.52■□□□□ 0.24
STRADA-231ENST00000638708 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
STRADA-231ENST00000638708 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
STRADA-231ENST00000638708 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
STRADA-231ENST00000638708 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
STRADA-231ENST00000638708 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
STRADA-231ENST00000638708 TSHZ2Q9NRE2 1034 aa16.36■□□□□ 0.21
STRADA-231ENST00000638708 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
STRADA-231ENST00000638708 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
STRADA-231ENST00000638708 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
STRADA-231ENST00000638708 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.19
STRADA-231ENST00000638708 WIZO95785 1651 aa16.26■□□□□ 0.19
STRADA-231ENST00000638708 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
STRADA-231ENST00000638708 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
STRADA-231ENST00000638708 EEA1Q15075 1411 aa16.2■□□□□ 0.18
STRADA-231ENST00000638708 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
STRADA-231ENST00000638708 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
STRADA-231ENST00000638708 CCDC88BA6NC98 1476 aa16.15■□□□□ 0.18
STRADA-231ENST00000638708 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
STRADA-231ENST00000638708 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
STRADA-231ENST00000638708 SOGA1O94964 1423 aa16.07■□□□□ 0.16
STRADA-231ENST00000638708 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
STRADA-231ENST00000638708 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
STRADA-231ENST00000638708 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
STRADA-231ENST00000638708 KIF21BO75037 1637 aa16■□□□□ 0.15
STRADA-231ENST00000638708 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
STRADA-231ENST00000638708 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
STRADA-231ENST00000638708 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
STRADA-231ENST00000638708 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
STRADA-231ENST00000638708 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
STRADA-231ENST00000638708 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
STRADA-231ENST00000638708 RBM19Q9Y4C8 960 aaKnown RBP15.94■□□□□ 0.14
STRADA-231ENST00000638708 CLIP1P30622 1438 aa15.92■□□□□ 0.14
STRADA-231ENST00000638708 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
STRADA-231ENST00000638708 BCANQ96GW7 911 aa15.89■□□□□ 0.13
STRADA-231ENST00000638708 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
STRADA-231ENST00000638708 FKBP8Q14318 412 aa15.88■□□□□ 0.13
STRADA-231ENST00000638708 NEFLP07196 543 aa15.82■□□□□ 0.12
STRADA-231ENST00000638708 CUX2O14529 1486 aa15.82■□□□□ 0.12
STRADA-231ENST00000638708 APLP2Q06481 763 aa15.81■□□□□ 0.12
STRADA-231ENST00000638708 MSH5O43196 834 aa15.8■□□□□ 0.12
STRADA-231ENST00000638708 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
STRADA-231ENST00000638708 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
STRADA-231ENST00000638708 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
STRADA-231ENST00000638708 KCNH8Q96L42 1107 aa15.77■□□□□ 0.12
STRADA-231ENST00000638708 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
STRADA-231ENST00000638708 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
STRADA-231ENST00000638708 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
STRADA-231ENST00000638708 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
STRADA-231ENST00000638708 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
STRADA-231ENST00000638708 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
STRADA-231ENST00000638708 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
STRADA-231ENST00000638708 ITGAEP38570 1179 aa15.65■□□□□ 0.1
STRADA-231ENST00000638708 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
STRADA-231ENST00000638708 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
STRADA-231ENST00000638708 WDR97A6NE52 1622 aa15.59■□□□□ 0.09
STRADA-231ENST00000638708 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
STRADA-231ENST00000638708 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
STRADA-231ENST00000638708 DEKP35659 375 aaKnown RBP15.58■□□□□ 0.08
STRADA-231ENST00000638708 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
STRADA-231ENST00000638708 NCAPD3P42695 1498 aa15.56■□□□□ 0.08
STRADA-231ENST00000638708 DDX10Q13206 875 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms