RNA–Protein interactions for RNA: ENST00000638518.1

MED17-215, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-215ENST00000638518 NISCHQ9Y2I1 1504 aa54.81■■■■■ 6.37
MED17-215ENST00000638518 CCDC180Q9P1Z9 1646 aa48.37■■■■■ 5.33
MED17-215ENST00000638518 ABCC9O60706 1549 aa46.65■■■■■ 5.06
MED17-215ENST00000638518 ZCCHC6Q5VYS8 1495 aaKnown RBP45.86■■■■■ 4.93
MED17-215ENST00000638518 DCAF8L2P0C7V8 631 aa45.41■■■■■ 4.86
MED17-215ENST00000638518 DCAF1Q9Y4B6 1507 aa45.4■■■■■ 4.86
MED17-215ENST00000638518 NACADO15069 1562 aa45.31■■■■■ 4.84
MED17-215ENST00000638518 MYO15BQ96JP2 1530 aa45.31■■■■■ 4.84
MED17-215ENST00000638518 RB1CC1Q8TDY2 1594 aa45.17■■■■■ 4.82
MED17-215ENST00000638518 SCRIBQ14160 1630 aa44.22■■■■■ 4.67
MED17-215ENST00000638518 UNC13AQ9UPW8 1703 aa44.13■■■■■ 4.66
MED17-215ENST00000638518 BICRAQ9NZM4 1560 aa43.84■■■■■ 4.61
MED17-215ENST00000638518 SHROOM4Q9ULL8 1493 aa43.74■■■■■ 4.59
MED17-215ENST00000638518 PABPN1Q86U42 306 aaKnown RBP eCLIP43.71■■■■■ 4.59
MED17-215ENST00000638518 CECR2Q9BXF3 1484 aa42.64■■■■■ 4.42
MED17-215ENST00000638518 EIF4G1Q04637 1599 aaKnown RBP42.59■■■■■ 4.41
MED17-215ENST00000638518 BAZ1AQ9NRL2 1556 aaPredicted RBP42.42■■■■■ 4.38
MED17-215ENST00000638518 SMARCA4P51532 1647 aa42.37■■■■■ 4.37
MED17-215ENST00000638518 MROH2BQ7Z745 1585 aa42.27■■■■■ 4.36
MED17-215ENST00000638518 CC2D2AQ9P2K1 1620 aa42.22■■■■■ 4.35
MED17-215ENST00000638518 DNAJC5BQ9UF47 199 aa42.16■■■■■ 4.34
MED17-215ENST00000638518 RSF1Q96T23 1441 aaPredicted RBP42.06■■■■■ 4.32
MED17-215ENST00000638518 ATAD2BQ9ULI0 1458 aa41.97■■■■■ 4.31
MED17-215ENST00000638518 PEG3Q9GZU2 1588 aa41.96■■■■■ 4.31
MED17-215ENST00000638518 SMARCA2P51531 1590 aa41.93■■■■■ 4.3
MED17-215ENST00000638518 WIZO95785 1651 aa41.82■■■■■ 4.29
MED17-215ENST00000638518 NCAPD3P42695 1498 aa41.82■■■■■ 4.29
MED17-215ENST00000638518 HMGXB3Q12766 1538 aa41.69■■■■■ 4.27
MED17-215ENST00000638518 BAZ1BQ9UIG0 1483 aaKnown RBP41.64■■■■■ 4.26
MED17-215ENST00000638518 SUPT5HO00267 1087 aaKnown RBP41.5■■■■■ 4.23
MED17-215ENST00000638518 TOP2AP11388 1531 aaKnown RBP41.46■■■■■ 4.23
MED17-215ENST00000638518 CCDC88BA6NC98 1476 aa40.96■■■■■ 4.15
MED17-215ENST00000638518 CADPSQ9ULU8 1353 aa40.63■■■■■ 4.1
MED17-215ENST00000638518 NESP48681 1621 aa40.6■■■■■ 4.09
MED17-215ENST00000638518 LAMC3Q9Y6N6 1575 aa40.57■■■■■ 4.09
MED17-215ENST00000638518 CFTRP13569 1480 aa40.57■■■■■ 4.08
MED17-215ENST00000638518 PDS5BQ9NTI5 1447 aa40.27■■■■■ 4.04
MED17-215ENST00000638518 PRDM2Q13029 1718 aa40.25■■■■■ 4.03
MED17-215ENST00000638518 FANCD2Q9BXW9 1451 aa40.18■■■■■ 4.02
MED17-215ENST00000638518 ERCC6Q03468 1493 aa40.12■■■■■ 4.01
MED17-215ENST00000638518 KIF21AQ7Z4S6 1674 aa40.1■■■■■ 4.01
MED17-215ENST00000638518 CEP164Q9UPV0 1460 aa40.05■■■■■ 4
MED17-215ENST00000638518 MRC2Q9UBG0 1479 aa39.85■■■■□ 3.97
MED17-215ENST00000638518 THOC2Q8NI27 1593 aaKnown RBP39.83■■■■□ 3.97
MED17-215ENST00000638518 URB2Q14146 1524 aaKnown RBP39.75■■■■□ 3.95
MED17-215ENST00000638518 WDR62O43379 1518 aa39.7■■■■□ 3.95
MED17-215ENST00000638518 ABCC8Q09428 1581 aa39.69■■■■□ 3.94
MED17-215ENST00000638518 DNMBPQ6XZF7 1577 aa39.63■■■■□ 3.94
MED17-215ENST00000638518 TOPBP1Q92547 1522 aa39.63■■■■□ 3.93
MED17-215ENST00000638518 CUX1P39880 1505 aa39.62■■■■□ 3.93
MED17-215ENST00000638518 WRNQ14191 1432 aaPredicted RBP eCLIP39.62■■■■□ 3.93
MED17-215ENST00000638518 SYNJ1O43426 1573 aa39.5■■■■□ 3.91
MED17-215ENST00000638518 TOP2BQ02880 1626 aa39.45■■■■□ 3.91
MED17-215ENST00000638518 CUX2O14529 1486 aa39.44■■■■□ 3.9
MED17-215ENST00000638518 BIVM-ERCC5R4GMW8 1640 aa39.43■■■■□ 3.9
MED17-215ENST00000638518 FGD5Q6ZNL6 1462 aa39.36■■■■□ 3.89
MED17-215ENST00000638518 POLA1P09884 1462 aaPredicted RBP39.35■■■■□ 3.89
MED17-215ENST00000638518 CHIC1Q5VXU3 224 aa39.2■■■■□ 3.87
MED17-215ENST00000638518 IFT140Q96RY7 1462 aa39.19■■■■□ 3.86
MED17-215ENST00000638518 RAD54L2Q9Y4B4 1467 aa39.17■■■■□ 3.86
MED17-215ENST00000638518 SOGA1O94964 1423 aa39.16■■■■□ 3.86
MED17-215ENST00000638518 TRIM41Q8WV44 630 aa39.14■■■■□ 3.86
MED17-215ENST00000638518 TARBP1Q13395 1621 aaKnown RBP39.13■■■■□ 3.85
MED17-215ENST00000638518 ABCA10Q8WWZ4 1543 aa39.01■■■■□ 3.84
MED17-215ENST00000638518 WDR97A6NE52 1622 aa38.99■■■■□ 3.83
MED17-215ENST00000638518 ZNF608Q9ULD9 1512 aaPredicted RBP38.96■■■■□ 3.83
MED17-215ENST00000638518 TDRD9Q8NDG6 1382 aaKnown RBP38.87■■■■□ 3.81
MED17-215ENST00000638518 EIF4G3O43432 1585 aaKnown RBP38.82■■■■□ 3.81
MED17-215ENST00000638518 AQRO60306 1485 aaKnown RBP eCLIP38.82■■■■□ 3.814e-7■■■□□ 16.8
MED17-215ENST00000638518 ABCA5Q8WWZ7 1642 aa38.79■■■■□ 3.8
MED17-215ENST00000638518 GAPVD1Q14C86 1478 aa38.73■■■■□ 3.79
MED17-215ENST00000638518 KIF27Q86VH2 1401 aa38.72■■■■□ 3.79
MED17-215ENST00000638518 RUSC2Q8N2Y8 1516 aa38.63■■■■□ 3.78
MED17-215ENST00000638518 GRIN2BQ13224 1484 aa38.63■■■■□ 3.77
MED17-215ENST00000638518 PBRM1Q86U86 1689 aa38.58■■■■□ 3.77
MED17-215ENST00000638518 ERICH3Q5RHP9 1530 aa38.54■■■■□ 3.76
MED17-215ENST00000638518 SNAPC4Q5SXM2 1469 aa38.5■■■■□ 3.75
MED17-215ENST00000638518 IGF1RP08069 1367 aa38.49■■■■□ 3.75
MED17-215ENST00000638518 EEA1Q15075 1411 aa38.47■■■■□ 3.75
MED17-215ENST00000638518 MAGI1Q96QZ7 1491 aaPredicted RBP38.45■■■■□ 3.75
MED17-215ENST00000638518 ADAMTS12P58397 1594 aa38.38■■■■□ 3.73
MED17-215ENST00000638518 FAM9AQ8IZU1 332 aaPredicted RBP38.33■■■■□ 3.73
MED17-215ENST00000638518 FHAD1B1AJZ9 1412 aa38.32■■■■□ 3.73
MED17-215ENST00000638518 CUL7Q14999 1698 aa38.32■■■■□ 3.72
MED17-215ENST00000638518 CSRNP3Q8WYN3 585 aa38.3■■■■□ 3.72
MED17-215ENST00000638518 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
MED17-215ENST00000638518 CARMIL1Q5VZK9 1371 aa38.26■■■■□ 3.72
MED17-215ENST00000638518 PRXQ9BXM0 1461 aa38.21■■■■□ 3.71
MED17-215ENST00000638518 CHMP7Q8WUX9 453 aaPredicted RBP38.17■■■■□ 3.7
MED17-215ENST00000638518 CHD1O14646 1710 aa38.15■■■■□ 3.7
MED17-215ENST00000638518 FBLN2P98095 1184 aa38.15■■■■□ 3.7
MED17-215ENST00000638518 GRIN2AQ12879 1464 aa38.15■■■■□ 3.7
MED17-215ENST00000638518 RAPGEF2Q9Y4G8 1499 aa38.12■■■■□ 3.69
MED17-215ENST00000638518 KIF21BO75037 1637 aa38.03■■■■□ 3.68
MED17-215ENST00000638518 NUP160Q12769 1436 aa37.96■■■■□ 3.67
MED17-215ENST00000638518 CEP170Q5SW79 1584 aa37.93■■■■□ 3.66
MED17-215ENST00000638518 OSCARQ8IYS5 282 aa37.9■■■■□ 3.66
MED17-215ENST00000638518 GOLGA3Q08378 1498 aa37.87■■■■□ 3.65
MED17-215ENST00000638518 CLASP1Q7Z460 1538 aa37.82■■■■□ 3.65
MED17-215ENST00000638518 EHMT2Q96KQ7 1210 aa37.76■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms