RNA–Protein interactions for RNA: ENST00000638481.1

SPIN3-208, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-208ENST00000638481 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
SPIN3-208ENST00000638481 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
SPIN3-208ENST00000638481 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
SPIN3-208ENST00000638481 ABCC9O60706 1549 aa28.07■■■□□ 2.08
SPIN3-208ENST00000638481 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
SPIN3-208ENST00000638481 DCAF1Q9Y4B6 1507 aa27.97■■■□□ 2.07
SPIN3-208ENST00000638481 MYO15BQ96JP2 1530 aa27.66■■■□□ 2.02
SPIN3-208ENST00000638481 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
SPIN3-208ENST00000638481 NACADO15069 1562 aa27.55■■■□□ 2
SPIN3-208ENST00000638481 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
SPIN3-208ENST00000638481 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
SPIN3-208ENST00000638481 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
SPIN3-208ENST00000638481 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
SPIN3-208ENST00000638481 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
SPIN3-208ENST00000638481 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
SPIN3-208ENST00000638481 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
SPIN3-208ENST00000638481 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
SPIN3-208ENST00000638481 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
SPIN3-208ENST00000638481 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
SPIN3-208ENST00000638481 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
SPIN3-208ENST00000638481 WIZO95785 1651 aa26.01■■□□□ 1.76
SPIN3-208ENST00000638481 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
SPIN3-208ENST00000638481 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
SPIN3-208ENST00000638481 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
SPIN3-208ENST00000638481 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
SPIN3-208ENST00000638481 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
SPIN3-208ENST00000638481 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
SPIN3-208ENST00000638481 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
SPIN3-208ENST00000638481 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
SPIN3-208ENST00000638481 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
SPIN3-208ENST00000638481 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
SPIN3-208ENST00000638481 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
SPIN3-208ENST00000638481 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
SPIN3-208ENST00000638481 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
SPIN3-208ENST00000638481 CFTRP13569 1480 aa24.84■■□□□ 1.57
SPIN3-208ENST00000638481 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
SPIN3-208ENST00000638481 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
SPIN3-208ENST00000638481 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
SPIN3-208ENST00000638481 WRNQ14191 1432 aaPredicted RBP eCLIP24.7■■□□□ 1.54
SPIN3-208ENST00000638481 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
SPIN3-208ENST00000638481 NESP48681 1621 aa24.64■■□□□ 1.53
SPIN3-208ENST00000638481 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
SPIN3-208ENST00000638481 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
SPIN3-208ENST00000638481 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
SPIN3-208ENST00000638481 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SPIN3-208ENST00000638481 CUX1P39880 1505 aa24.49■■□□□ 1.51
SPIN3-208ENST00000638481 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
SPIN3-208ENST00000638481 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.5
SPIN3-208ENST00000638481 SOGA1O94964 1423 aa24.38■■□□□ 1.49
SPIN3-208ENST00000638481 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
SPIN3-208ENST00000638481 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SPIN3-208ENST00000638481 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
SPIN3-208ENST00000638481 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SPIN3-208ENST00000638481 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
SPIN3-208ENST00000638481 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
SPIN3-208ENST00000638481 EEA1Q15075 1411 aa24.25■■□□□ 1.47
SPIN3-208ENST00000638481 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
SPIN3-208ENST00000638481 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
SPIN3-208ENST00000638481 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
SPIN3-208ENST00000638481 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
SPIN3-208ENST00000638481 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
SPIN3-208ENST00000638481 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
SPIN3-208ENST00000638481 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
SPIN3-208ENST00000638481 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
SPIN3-208ENST00000638481 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
SPIN3-208ENST00000638481 CUX2O14529 1486 aa24.04■■□□□ 1.44
SPIN3-208ENST00000638481 KIF21BO75037 1637 aa24.01■■□□□ 1.43
SPIN3-208ENST00000638481 WDR97A6NE52 1622 aa24■■□□□ 1.43
SPIN3-208ENST00000638481 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
SPIN3-208ENST00000638481 WDR62O43379 1518 aa23.99■■□□□ 1.43
SPIN3-208ENST00000638481 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
SPIN3-208ENST00000638481 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
SPIN3-208ENST00000638481 HRCP23327 699 aa23.93■■□□□ 1.42
SPIN3-208ENST00000638481 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
SPIN3-208ENST00000638481 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
SPIN3-208ENST00000638481 PRXQ9BXM0 1461 aa23.89■■□□□ 1.42
SPIN3-208ENST00000638481 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
SPIN3-208ENST00000638481 IGF1RP08069 1367 aa23.85■■□□□ 1.41
SPIN3-208ENST00000638481 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
SPIN3-208ENST00000638481 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.4
SPIN3-208ENST00000638481 UBTFP17480 764 aaKnown RBP23.82■■□□□ 1.4
SPIN3-208ENST00000638481 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
SPIN3-208ENST00000638481 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
SPIN3-208ENST00000638481 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
SPIN3-208ENST00000638481 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
SPIN3-208ENST00000638481 CUL7Q14999 1698 aa23.73■■□□□ 1.39
SPIN3-208ENST00000638481 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
SPIN3-208ENST00000638481 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
SPIN3-208ENST00000638481 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
SPIN3-208ENST00000638481 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
SPIN3-208ENST00000638481 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
SPIN3-208ENST00000638481 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
SPIN3-208ENST00000638481 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
SPIN3-208ENST00000638481 CLIP1P30622 1438 aa23.56■■□□□ 1.36
SPIN3-208ENST00000638481 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
SPIN3-208ENST00000638481 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.35
SPIN3-208ENST00000638481 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
SPIN3-208ENST00000638481 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
SPIN3-208ENST00000638481 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
SPIN3-208ENST00000638481 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms