RNA–Protein interactions for RNA: ENST00000638426.1

SRSF8-202, Transcript of serine and arginine rich splicing factor 8, humanhuman

TSL 2

Gene SRSF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF8-202ENST00000638426 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
SRSF8-202ENST00000638426 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
SRSF8-202ENST00000638426 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
SRSF8-202ENST00000638426 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
SRSF8-202ENST00000638426 FOXD1Q16676 465 aa20.93■□□□□ 0.94
SRSF8-202ENST00000638426 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
SRSF8-202ENST00000638426 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
SRSF8-202ENST00000638426 ADRA2BP18089 450 aa19.78■□□□□ 0.76
SRSF8-202ENST00000638426 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
SRSF8-202ENST00000638426 MSH5O43196 834 aa19.42■□□□□ 0.7
SRSF8-202ENST00000638426 NISCHQ9Y2I1 1504 aa19.18■□□□□ 0.66
SRSF8-202ENST00000638426 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
SRSF8-202ENST00000638426 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
SRSF8-202ENST00000638426 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
SRSF8-202ENST00000638426 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
SRSF8-202ENST00000638426 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
SRSF8-202ENST00000638426 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.4
SRSF8-202ENST00000638426 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
SRSF8-202ENST00000638426 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
SRSF8-202ENST00000638426 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
SRSF8-202ENST00000638426 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
SRSF8-202ENST00000638426 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
SRSF8-202ENST00000638426 KCNA4P22459 653 aa17.17■□□□□ 0.34
SRSF8-202ENST00000638426 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
SRSF8-202ENST00000638426 ABCC9O60706 1549 aa16.91■□□□□ 0.3
SRSF8-202ENST00000638426 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
SRSF8-202ENST00000638426 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
SRSF8-202ENST00000638426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.231e-7■□□□□ 10.1
SRSF8-202ENST00000638426 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
SRSF8-202ENST00000638426 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
SRSF8-202ENST00000638426 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
SRSF8-202ENST00000638426 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
SRSF8-202ENST00000638426 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
SRSF8-202ENST00000638426 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
SRSF8-202ENST00000638426 NACADO15069 1562 aa16.13■□□□□ 0.17
SRSF8-202ENST00000638426 UNC13AQ9UPW8 1703 aa16.11■□□□□ 0.17
SRSF8-202ENST00000638426 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
SRSF8-202ENST00000638426 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
SRSF8-202ENST00000638426 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
SRSF8-202ENST00000638426 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
SRSF8-202ENST00000638426 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
SRSF8-202ENST00000638426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
SRSF8-202ENST00000638426 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
SRSF8-202ENST00000638426 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
SRSF8-202ENST00000638426 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
SRSF8-202ENST00000638426 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.12
SRSF8-202ENST00000638426 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
SRSF8-202ENST00000638426 ZBTB22O15209 634 aa15.81■□□□□ 0.12
SRSF8-202ENST00000638426 CAPN15O75808 1086 aa15.81■□□□□ 0.12
SRSF8-202ENST00000638426 APLP2Q06481 763 aa15.78■□□□□ 0.12
SRSF8-202ENST00000638426 DSG3P32926 999 aa15.69■□□□□ 0.1
SRSF8-202ENST00000638426 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
SRSF8-202ENST00000638426 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
SRSF8-202ENST00000638426 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
SRSF8-202ENST00000638426 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
SRSF8-202ENST00000638426 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
SRSF8-202ENST00000638426 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
SRSF8-202ENST00000638426 ABCB7O75027 752 aa15.48■□□□□ 0.07
SRSF8-202ENST00000638426 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
SRSF8-202ENST00000638426 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
SRSF8-202ENST00000638426 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
SRSF8-202ENST00000638426 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
SRSF8-202ENST00000638426 POLA2Q14181 598 aa15.34■□□□□ 0.05
SRSF8-202ENST00000638426 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
SRSF8-202ENST00000638426 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
SRSF8-202ENST00000638426 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
SRSF8-202ENST00000638426 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
SRSF8-202ENST00000638426 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
SRSF8-202ENST00000638426 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
SRSF8-202ENST00000638426 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
SRSF8-202ENST00000638426 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
SRSF8-202ENST00000638426 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
SRSF8-202ENST00000638426 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
SRSF8-202ENST00000638426 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
SRSF8-202ENST00000638426 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
SRSF8-202ENST00000638426 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
SRSF8-202ENST00000638426 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
SRSF8-202ENST00000638426 FBLN2P98095 1184 aa14.81□□□□□ -0.04
SRSF8-202ENST00000638426 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
SRSF8-202ENST00000638426 WIZO95785 1651 aa14.72□□□□□ -0.05
SRSF8-202ENST00000638426 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
SRSF8-202ENST00000638426 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
SRSF8-202ENST00000638426 NESP48681 1621 aa14.63□□□□□ -0.07
SRSF8-202ENST00000638426 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
SRSF8-202ENST00000638426 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
SRSF8-202ENST00000638426 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
SRSF8-202ENST00000638426 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.07
SRSF8-202ENST00000638426 POTEHQ6S545 545 aa14.56□□□□□ -0.08
SRSF8-202ENST00000638426 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
SRSF8-202ENST00000638426 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
SRSF8-202ENST00000638426 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
SRSF8-202ENST00000638426 ERCC6Q03468 1493 aa14.52□□□□□ -0.08
SRSF8-202ENST00000638426 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
SRSF8-202ENST00000638426 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
SRSF8-202ENST00000638426 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
SRSF8-202ENST00000638426 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
SRSF8-202ENST00000638426 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
SRSF8-202ENST00000638426 CUX2O14529 1486 aa14.45□□□□□ -0.1
SRSF8-202ENST00000638426 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
SRSF8-202ENST00000638426 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms