RNA–Protein interactions for RNA: ENST00000638390.1

PRRC2B-210, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 1,084 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-210ENST00000638390 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
PRRC2B-210ENST00000638390 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
PRRC2B-210ENST00000638390 ABCC9O60706 1549 aa31.66■■■□□ 2.66
PRRC2B-210ENST00000638390 RB1CC1Q8TDY2 1594 aa30.45■■■□□ 2.47
PRRC2B-210ENST00000638390 NACADO15069 1562 aa30.41■■■□□ 2.46
PRRC2B-210ENST00000638390 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
PRRC2B-210ENST00000638390 MYO15BQ96JP2 1530 aa30.23■■■□□ 2.43
PRRC2B-210ENST00000638390 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
PRRC2B-210ENST00000638390 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
PRRC2B-210ENST00000638390 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.36
PRRC2B-210ENST00000638390 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
PRRC2B-210ENST00000638390 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
PRRC2B-210ENST00000638390 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
PRRC2B-210ENST00000638390 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
PRRC2B-210ENST00000638390 DNAJC5BQ9UF47 199 aa29.13■■■□□ 2.25
PRRC2B-210ENST00000638390 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
PRRC2B-210ENST00000638390 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
PRRC2B-210ENST00000638390 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
PRRC2B-210ENST00000638390 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
PRRC2B-210ENST00000638390 BAZ1AQ9NRL2 1556 aaPredicted RBP28.14■■■□□ 2.1
PRRC2B-210ENST00000638390 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
PRRC2B-210ENST00000638390 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
PRRC2B-210ENST00000638390 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
PRRC2B-210ENST00000638390 MROH2BQ7Z745 1585 aa27.95■■■□□ 2.07
PRRC2B-210ENST00000638390 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
PRRC2B-210ENST00000638390 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
PRRC2B-210ENST00000638390 BAZ1BQ9UIG0 1483 aaKnown RBP27.79■■■□□ 2.04
PRRC2B-210ENST00000638390 WIZO95785 1651 aa27.65■■■□□ 2.02
PRRC2B-210ENST00000638390 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
PRRC2B-210ENST00000638390 NESP48681 1621 aa27.38■■□□□ 1.97
PRRC2B-210ENST00000638390 TOP2AP11388 1531 aaKnown RBP27.37■■□□□ 1.97
PRRC2B-210ENST00000638390 LAMC3Q9Y6N6 1575 aa27.34■■□□□ 1.97
PRRC2B-210ENST00000638390 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
PRRC2B-210ENST00000638390 CADPSQ9ULU8 1353 aa27.21■■□□□ 1.95
PRRC2B-210ENST00000638390 PDS5BQ9NTI5 1447 aa27.12■■□□□ 1.93
PRRC2B-210ENST00000638390 CUX2O14529 1486 aa27.09■■□□□ 1.93
PRRC2B-210ENST00000638390 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.92
PRRC2B-210ENST00000638390 CFTRP13569 1480 aa27.05■■□□□ 1.92
PRRC2B-210ENST00000638390 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
PRRC2B-210ENST00000638390 CCDC88BA6NC98 1476 aa27.01■■□□□ 1.91
PRRC2B-210ENST00000638390 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
PRRC2B-210ENST00000638390 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
PRRC2B-210ENST00000638390 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
PRRC2B-210ENST00000638390 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
PRRC2B-210ENST00000638390 WDR62O43379 1518 aa26.81■■□□□ 1.88
PRRC2B-210ENST00000638390 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
PRRC2B-210ENST00000638390 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
PRRC2B-210ENST00000638390 TOPBP1Q92547 1522 aa26.46■■□□□ 1.83
PRRC2B-210ENST00000638390 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
PRRC2B-210ENST00000638390 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
PRRC2B-210ENST00000638390 IFT140Q96RY7 1462 aa26.33■■□□□ 1.81
PRRC2B-210ENST00000638390 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
PRRC2B-210ENST00000638390 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
PRRC2B-210ENST00000638390 CUX1P39880 1505 aa26.24■■□□□ 1.79
PRRC2B-210ENST00000638390 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
PRRC2B-210ENST00000638390 ZNF608Q9ULD9 1512 aaPredicted RBP26.2■■□□□ 1.79
PRRC2B-210ENST00000638390 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
PRRC2B-210ENST00000638390 EIF4G3O43432 1585 aaKnown RBP26.13■■□□□ 1.77
PRRC2B-210ENST00000638390 RAD54L2Q9Y4B4 1467 aa26.11■■□□□ 1.77
PRRC2B-210ENST00000638390 SOGA1O94964 1423 aa26.09■■□□□ 1.77
PRRC2B-210ENST00000638390 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
PRRC2B-210ENST00000638390 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.765e-7■■■■□ 20
PRRC2B-210ENST00000638390 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
PRRC2B-210ENST00000638390 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
PRRC2B-210ENST00000638390 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
PRRC2B-210ENST00000638390 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
PRRC2B-210ENST00000638390 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
PRRC2B-210ENST00000638390 ABCA10Q8WWZ4 1543 aa25.91■■□□□ 1.74
PRRC2B-210ENST00000638390 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
PRRC2B-210ENST00000638390 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
PRRC2B-210ENST00000638390 GRIN2BQ13224 1484 aa25.83■■□□□ 1.73
PRRC2B-210ENST00000638390 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
PRRC2B-210ENST00000638390 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
PRRC2B-210ENST00000638390 CHD1O14646 1710 aa25.8■■□□□ 1.72
PRRC2B-210ENST00000638390 PBRM1Q86U86 1689 aa25.79■■□□□ 1.72
PRRC2B-210ENST00000638390 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
PRRC2B-210ENST00000638390 SYNJ2O15056 1496 aa25.68■■□□□ 1.7
PRRC2B-210ENST00000638390 FBLN2P98095 1184 aa25.66■■□□□ 1.7
PRRC2B-210ENST00000638390 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
PRRC2B-210ENST00000638390 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
PRRC2B-210ENST00000638390 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
PRRC2B-210ENST00000638390 CLASP1Q7Z460 1538 aa25.55■■□□□ 1.68
PRRC2B-210ENST00000638390 RIMBP3CA6NJZ7 1639 aa25.54■■□□□ 1.68
PRRC2B-210ENST00000638390 RIMBP3BA6NNM3 1639 aa25.54■■□□□ 1.68
PRRC2B-210ENST00000638390 RIMBP3Q9UFD9 1639 aa25.54■■□□□ 1.68
PRRC2B-210ENST00000638390 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
PRRC2B-210ENST00000638390 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
PRRC2B-210ENST00000638390 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
PRRC2B-210ENST00000638390 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
PRRC2B-210ENST00000638390 NUP160Q12769 1436 aa25.41■■□□□ 1.66
PRRC2B-210ENST00000638390 CEP170Q5SW79 1584 aa25.39■■□□□ 1.66
PRRC2B-210ENST00000638390 IGF1RP08069 1367 aa25.37■■□□□ 1.65
PRRC2B-210ENST00000638390 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
PRRC2B-210ENST00000638390 CUL7Q14999 1698 aa25.36■■□□□ 1.65
PRRC2B-210ENST00000638390 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
PRRC2B-210ENST00000638390 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
PRRC2B-210ENST00000638390 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
PRRC2B-210ENST00000638390 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
PRRC2B-210ENST00000638390 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
PRRC2B-210ENST00000638390 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms