RNA–Protein interactions for RNA: ENST00000638294.1

MED17-213, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-213ENST00000638294 NISCHQ9Y2I1 1504 aa56.04■■■■■ 6.56
MED17-213ENST00000638294 CCDC180Q9P1Z9 1646 aa50.12■■■■■ 5.61
MED17-213ENST00000638294 ABCC9O60706 1549 aa49.55■■■■■ 5.52
MED17-213ENST00000638294 RB1CC1Q8TDY2 1594 aa47.49■■■■■ 5.19
MED17-213ENST00000638294 NACADO15069 1562 aa47.32■■■■■ 5.17
MED17-213ENST00000638294 DCAF8L2P0C7V8 631 aa47.06■■■■■ 5.12
MED17-213ENST00000638294 MYO15BQ96JP2 1530 aa46.89■■■■■ 5.1
MED17-213ENST00000638294 ZCCHC6Q5VYS8 1495 aaKnown RBP46.55■■■■■ 5.04
MED17-213ENST00000638294 DCAF1Q9Y4B6 1507 aa46.42■■■■■ 5.02
MED17-213ENST00000638294 UNC13AQ9UPW8 1703 aa46.22■■■■■ 4.99
MED17-213ENST00000638294 PABPN1Q86U42 306 aaKnown RBP eCLIP46.18■■■■■ 4.98
MED17-213ENST00000638294 DNAJC5BQ9UF47 199 aa45.96■■■■■ 4.95
MED17-213ENST00000638294 BICRAQ9NZM4 1560 aa45.96■■■■■ 4.95
MED17-213ENST00000638294 SHROOM4Q9ULL8 1493 aa45.66■■■■■ 4.9
MED17-213ENST00000638294 SCRIBQ14160 1630 aa45.58■■■■■ 4.89
MED17-213ENST00000638294 EIF4G1Q04637 1599 aaKnown RBP44.86■■■■■ 4.77
MED17-213ENST00000638294 CC2D2AQ9P2K1 1620 aa44.8■■■■■ 4.76
MED17-213ENST00000638294 CECR2Q9BXF3 1484 aa44.66■■■■■ 4.74
MED17-213ENST00000638294 NCAPD3P42695 1498 aa43.65■■■■■ 4.58
MED17-213ENST00000638294 SMARCA4P51532 1647 aa43.59■■■■■ 4.57
MED17-213ENST00000638294 ATAD2BQ9ULI0 1458 aa43.53■■■■■ 4.56
MED17-213ENST00000638294 BAZ1AQ9NRL2 1556 aaPredicted RBP43.53■■■■■ 4.56
MED17-213ENST00000638294 SMARCA2P51531 1590 aa43.52■■■■■ 4.56
MED17-213ENST00000638294 HMGXB3Q12766 1538 aa43.38■■■■■ 4.53
MED17-213ENST00000638294 PEG3Q9GZU2 1588 aa43.23■■■■■ 4.51
MED17-213ENST00000638294 BAZ1BQ9UIG0 1483 aaKnown RBP43.18■■■■■ 4.5
MED17-213ENST00000638294 MROH2BQ7Z745 1585 aa43.11■■■■■ 4.49
MED17-213ENST00000638294 ERCC6Q03468 1493 aa42.86■■■■■ 4.45
MED17-213ENST00000638294 CUX2O14529 1486 aa42.66■■■■■ 4.42
MED17-213ENST00000638294 NESP48681 1621 aa42.64■■■■■ 4.42
MED17-213ENST00000638294 LAMC3Q9Y6N6 1575 aa42.61■■■■■ 4.41
MED17-213ENST00000638294 WIZO95785 1651 aa42.58■■■■■ 4.41
MED17-213ENST00000638294 RSF1Q96T23 1441 aaPredicted RBP42.45■■■■■ 4.39
MED17-213ENST00000638294 PDS5BQ9NTI5 1447 aa42.38■■■■■ 4.38
MED17-213ENST00000638294 CADPSQ9ULU8 1353 aa42.35■■■■■ 4.37
MED17-213ENST00000638294 TOP2AP11388 1531 aaKnown RBP42.2■■■■■ 4.35
MED17-213ENST00000638294 THOC2Q8NI27 1593 aaKnown RBP42.18■■■■■ 4.34
MED17-213ENST00000638294 KIF21AQ7Z4S6 1674 aa42.12■■■■■ 4.33
MED17-213ENST00000638294 DNAJC5Q9H3Z4 198 aa42.02■■■■■ 4.32
MED17-213ENST00000638294 CFTRP13569 1480 aa41.95■■■■■ 4.31
MED17-213ENST00000638294 MRC2Q9UBG0 1479 aa41.92■■■■■ 4.3
MED17-213ENST00000638294 CEP164Q9UPV0 1460 aa41.86■■■■■ 4.29
MED17-213ENST00000638294 FANCD2Q9BXW9 1451 aa41.83■■■■■ 4.29
MED17-213ENST00000638294 WDR62O43379 1518 aa41.79■■■■■ 4.28
MED17-213ENST00000638294 CCDC88BA6NC98 1476 aa41.66■■■■■ 4.26
MED17-213ENST00000638294 PRDM2Q13029 1718 aa41.51■■■■■ 4.24
MED17-213ENST00000638294 URB2Q14146 1524 aaKnown RBP41.39■■■■■ 4.22
MED17-213ENST00000638294 ABCC8Q09428 1581 aa41.17■■■■■ 4.18
MED17-213ENST00000638294 TOPBP1Q92547 1522 aa41.07■■■■■ 4.16
MED17-213ENST00000638294 IFT140Q96RY7 1462 aa41.03■■■■■ 4.16
MED17-213ENST00000638294 DNMBPQ6XZF7 1577 aa40.99■■■■■ 4.15
MED17-213ENST00000638294 SUPT5HO00267 1087 aaKnown RBP40.88■■■■■ 4.13
MED17-213ENST00000638294 OSCARQ8IYS5 282 aa40.78■■■■■ 4.12
MED17-213ENST00000638294 ZNF608Q9ULD9 1512 aaPredicted RBP40.77■■■■■ 4.12
MED17-213ENST00000638294 POLA1P09884 1462 aaPredicted RBP40.68■■■■■ 4.1
MED17-213ENST00000638294 TARBP1Q13395 1621 aaKnown RBP40.64■■■■■ 4.1
MED17-213ENST00000638294 EIF4G3O43432 1585 aaKnown RBP40.61■■■■■ 4.09
MED17-213ENST00000638294 SOGA1O94964 1423 aa40.54■■■■■ 4.08
MED17-213ENST00000638294 CUX1P39880 1505 aa40.49■■■■■ 4.07
MED17-213ENST00000638294 AQRO60306 1485 aaKnown RBP eCLIP40.49■■■■■ 4.078e-9■■□□□ 13.6
MED17-213ENST00000638294 FGD5Q6ZNL6 1462 aa40.49■■■■■ 4.07
MED17-213ENST00000638294 RAD54L2Q9Y4B4 1467 aa40.45■■■■■ 4.07
MED17-213ENST00000638294 WDR97A6NE52 1622 aa40.43■■■■■ 4.06
MED17-213ENST00000638294 TDRD9Q8NDG6 1382 aaKnown RBP40.34■■■■■ 4.05
MED17-213ENST00000638294 TRIM41Q8WV44 630 aa40.31■■■■■ 4.04
MED17-213ENST00000638294 FBLN2P98095 1184 aa40.18■■■■■ 4.02
MED17-213ENST00000638294 CHD1O14646 1710 aa40.17■■■■■ 4.02
MED17-213ENST00000638294 GRIN2BQ13224 1484 aa40.17■■■■■ 4.02
MED17-213ENST00000638294 MAGI1Q96QZ7 1491 aaPredicted RBP40.14■■■■■ 4.02
MED17-213ENST00000638294 SNAPC4Q5SXM2 1469 aa40.13■■■■■ 4.02
MED17-213ENST00000638294 ABCA10Q8WWZ4 1543 aa40.11■■■■■ 4.01
MED17-213ENST00000638294 WRNQ14191 1432 aaPredicted RBP eCLIP40.08■■■■■ 4.01
MED17-213ENST00000638294 RIMBP3CA6NJZ7 1639 aa40.06■■■■■ 4
MED17-213ENST00000638294 RIMBP3BA6NNM3 1639 aa40.06■■■■■ 4
MED17-213ENST00000638294 RIMBP3Q9UFD9 1639 aa40.06■■■■■ 4
MED17-213ENST00000638294 GAPVD1Q14C86 1478 aa40.06■■■■■ 4
MED17-213ENST00000638294 ARHGEF11O15085 1522 aa40.04■■■■■ 4
MED17-213ENST00000638294 TOP2BQ02880 1626 aa40.03■■■■■ 4
MED17-213ENST00000638294 CHMP7Q8WUX9 453 aaPredicted RBP40.03■■■■■ 4
MED17-213ENST00000638294 BIVM-ERCC5R4GMW8 1640 aa40.01■■■■■ 4
MED17-213ENST00000638294 SYNJ2O15056 1496 aa39.97■■■■□ 3.99
MED17-213ENST00000638294 ABCA5Q8WWZ7 1642 aa39.94■■■■□ 3.99
MED17-213ENST00000638294 PBRM1Q86U86 1689 aa39.92■■■■□ 3.98
MED17-213ENST00000638294 SYNJ1O43426 1573 aa39.91■■■■□ 3.98
MED17-213ENST00000638294 CLASP1Q7Z460 1538 aa39.8■■■■□ 3.96
MED17-213ENST00000638294 CYB5RLQ6IPT4 315 aa39.72■■■■□ 3.95
MED17-213ENST00000638294 ARAP1Q96P48 1450 aa39.65■■■■□ 3.94
MED17-213ENST00000638294 ERICH3Q5RHP9 1530 aa39.64■■■■□ 3.94
MED17-213ENST00000638294 ADAMTS12P58397 1594 aa39.62■■■■□ 3.93
MED17-213ENST00000638294 GRIN2AQ12879 1464 aa39.62■■■■□ 3.93
MED17-213ENST00000638294 FHAD1B1AJZ9 1412 aa39.61■■■■□ 3.93
MED17-213ENST00000638294 NUP160Q12769 1436 aa39.48■■■■□ 3.91
MED17-213ENST00000638294 CEP170Q5SW79 1584 aa39.38■■■■□ 3.89
MED17-213ENST00000638294 KIF27Q86VH2 1401 aa39.34■■■■□ 3.89
MED17-213ENST00000638294 SHROOM2Q13796 1616 aa39.2■■■■□ 3.87
MED17-213ENST00000638294 IGF1RP08069 1367 aa39.19■■■■□ 3.86
MED17-213ENST00000638294 TRHP20396 242 aaPredicted RBP39.16■■■■□ 3.86
MED17-213ENST00000638294 CUL7Q14999 1698 aa39.15■■■■□ 3.86
MED17-213ENST00000638294 ERCC6L2Q5T890 1561 aa39.09■■■■□ 3.85
MED17-213ENST00000638294 JPH4Q96JJ6 628 aa39.08■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms