RNA–Protein interactions for RNA: ENST00000636865.1

AMT-239, Transcript of aminomethyltransferase, humanhuman

TSL 5 BASIC

Gene AMT, Length 1,914 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-239ENST00000636865 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
AMT-239ENST00000636865 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
AMT-239ENST00000636865 ABCC9O60706 1549 aa30.31■■■□□ 2.44
AMT-239ENST00000636865 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
AMT-239ENST00000636865 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
AMT-239ENST00000636865 NACADO15069 1562 aa29.24■■■□□ 2.27
AMT-239ENST00000636865 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
AMT-239ENST00000636865 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
AMT-239ENST00000636865 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
AMT-239ENST00000636865 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
AMT-239ENST00000636865 SCRIBQ14160 1630 aa28.45■■■□□ 2.15
AMT-239ENST00000636865 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.143e-6■■■■□ 23.3
AMT-239ENST00000636865 BICRAQ9NZM4 1560 aa28.31■■■□□ 2.12
AMT-239ENST00000636865 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
AMT-239ENST00000636865 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
AMT-239ENST00000636865 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
AMT-239ENST00000636865 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
AMT-239ENST00000636865 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
AMT-239ENST00000636865 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
AMT-239ENST00000636865 SMARCA4P51532 1647 aa27.22■■□□□ 1.95
AMT-239ENST00000636865 MROH2BQ7Z745 1585 aa27.11■■□□□ 1.93
AMT-239ENST00000636865 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
AMT-239ENST00000636865 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
AMT-239ENST00000636865 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
AMT-239ENST00000636865 PEG3Q9GZU2 1588 aa26.94■■□□□ 1.9
AMT-239ENST00000636865 RSF1Q96T23 1441 aaPredicted RBP26.89■■□□□ 1.9
AMT-239ENST00000636865 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
AMT-239ENST00000636865 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
AMT-239ENST00000636865 WIZO95785 1651 aa26.82■■□□□ 1.88
AMT-239ENST00000636865 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
AMT-239ENST00000636865 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
AMT-239ENST00000636865 NESP48681 1621 aa26.29■■□□□ 1.8
AMT-239ENST00000636865 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
AMT-239ENST00000636865 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
AMT-239ENST00000636865 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
AMT-239ENST00000636865 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
AMT-239ENST00000636865 CFTRP13569 1480 aa26.11■■□□□ 1.77
AMT-239ENST00000636865 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
AMT-239ENST00000636865 KIF21AQ7Z4S6 1674 aa25.94■■□□□ 1.74
AMT-239ENST00000636865 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
AMT-239ENST00000636865 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
AMT-239ENST00000636865 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
AMT-239ENST00000636865 THOC2Q8NI27 1593 aaKnown RBP25.8■■□□□ 1.72
AMT-239ENST00000636865 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
AMT-239ENST00000636865 CUX2O14529 1486 aa25.72■■□□□ 1.71
AMT-239ENST00000636865 WDR62O43379 1518 aa25.67■■□□□ 1.7
AMT-239ENST00000636865 URB2Q14146 1524 aaKnown RBP25.64■■□□□ 1.69
AMT-239ENST00000636865 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
AMT-239ENST00000636865 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
AMT-239ENST00000636865 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
AMT-239ENST00000636865 CUX1P39880 1505 aa25.41■■□□□ 1.66
AMT-239ENST00000636865 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
AMT-239ENST00000636865 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.65
AMT-239ENST00000636865 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
AMT-239ENST00000636865 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
AMT-239ENST00000636865 SOGA1O94964 1423 aa25.26■■□□□ 1.63
AMT-239ENST00000636865 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
AMT-239ENST00000636865 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
AMT-239ENST00000636865 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
AMT-239ENST00000636865 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
AMT-239ENST00000636865 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
AMT-239ENST00000636865 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
AMT-239ENST00000636865 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
AMT-239ENST00000636865 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.618e-7■■■■□ 24.7
AMT-239ENST00000636865 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.6
AMT-239ENST00000636865 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
AMT-239ENST00000636865 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
AMT-239ENST00000636865 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
AMT-239ENST00000636865 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
AMT-239ENST00000636865 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
AMT-239ENST00000636865 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
AMT-239ENST00000636865 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
AMT-239ENST00000636865 PBRM1Q86U86 1689 aa24.84■■□□□ 1.57
AMT-239ENST00000636865 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
AMT-239ENST00000636865 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
AMT-239ENST00000636865 FBLN2P98095 1184 aa24.8■■□□□ 1.56
AMT-239ENST00000636865 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
AMT-239ENST00000636865 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
AMT-239ENST00000636865 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
AMT-239ENST00000636865 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
AMT-239ENST00000636865 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
AMT-239ENST00000636865 DNAJC5Q9H3Z4 198 aa24.73■■□□□ 1.55
AMT-239ENST00000636865 CHD1O14646 1710 aa24.7■■□□□ 1.54
AMT-239ENST00000636865 IGF1RP08069 1367 aa24.7■■□□□ 1.54
AMT-239ENST00000636865 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
AMT-239ENST00000636865 ADAMTS12P58397 1594 aa24.66■■□□□ 1.54
AMT-239ENST00000636865 RUSC2Q8N2Y8 1516 aa24.65■■□□□ 1.54
AMT-239ENST00000636865 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
AMT-239ENST00000636865 CUL7Q14999 1698 aa24.56■■□□□ 1.52
AMT-239ENST00000636865 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
AMT-239ENST00000636865 EEA1Q15075 1411 aa24.47■■□□□ 1.51
AMT-239ENST00000636865 NUP160Q12769 1436 aa24.46■■□□□ 1.51
AMT-239ENST00000636865 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.51
AMT-239ENST00000636865 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.51
AMT-239ENST00000636865 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
AMT-239ENST00000636865 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
AMT-239ENST00000636865 RAPGEF2Q9Y4G8 1499 aa24.42■■□□□ 1.5
AMT-239ENST00000636865 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
AMT-239ENST00000636865 ARHGEF11O15085 1522 aa24.32■■□□□ 1.48
AMT-239ENST00000636865 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms