RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 DNAJC5BQ9UF47 199 aa9.57□□□□□ -0.88
CHD2-225ENST00000636861 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
CHD2-225ENST00000636861 ABCC9O60706 1549 aa9.1□□□□□ -0.95
CHD2-225ENST00000636861 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
CHD2-225ENST00000636861 NISCHQ9Y2I1 1504 aa8.46□□□□□ -1.05
CHD2-225ENST00000636861 ILDR1Q86SU0 546 aaPredicted RBP8.28□□□□□ -1.08
CHD2-225ENST00000636861 PABPN1Q86U42 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
CHD2-225ENST00000636861 CECR2Q9BXF3 1484 aa8.27□□□□□ -1.09
CHD2-225ENST00000636861 AEBP2Q6ZN18 517 aaPredicted RBP8.21□□□□□ -1.1
CHD2-225ENST00000636861 CUX2O14529 1486 aa8.2□□□□□ -1.1
CHD2-225ENST00000636861 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
CHD2-225ENST00000636861 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.11
CHD2-225ENST00000636861 RB1CC1Q8TDY2 1594 aa8.12□□□□□ -1.11
CHD2-225ENST00000636861 BICRAQ9NZM4 1560 aa8.09□□□□□ -1.11
CHD2-225ENST00000636861 CCDC180Q9P1Z9 1646 aa8.04□□□□□ -1.12
CHD2-225ENST00000636861 EIF4G1Q04637 1599 aaKnown RBP7.89□□□□□ -1.15
CHD2-225ENST00000636861 ERCC6Q03468 1493 aa7.82□□□□□ -1.16
CHD2-225ENST00000636861 NACADO15069 1562 aa7.8□□□□□ -1.16
CHD2-225ENST00000636861 RIMBP3CA6NJZ7 1639 aa7.77□□□□□ -1.17
CHD2-225ENST00000636861 RIMBP3BA6NNM3 1639 aa7.77□□□□□ -1.17
CHD2-225ENST00000636861 RIMBP3Q9UFD9 1639 aa7.77□□□□□ -1.17
CHD2-225ENST00000636861 THOC2Q8NI27 1593 aaKnown RBP7.71□□□□□ -1.17
CHD2-225ENST00000636861 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.18
CHD2-225ENST00000636861 LMTK3Q96Q04 1460 aa7.7□□□□□ -1.18
CHD2-225ENST00000636861 SOCS7O14512 581 aa7.7□□□□□ -1.18
CHD2-225ENST00000636861 ILDR2Q71H61 639 aa7.7□□□□□ -1.18
CHD2-225ENST00000636861 SHROOM4Q9ULL8 1493 aa7.67□□□□□ -1.18
CHD2-225ENST00000636861 BAZ1AQ9NRL2 1556 aaPredicted RBP7.66□□□□□ -1.18
CHD2-225ENST00000636861 ARHGEF11O15085 1522 aa7.6□□□□□ -1.19
CHD2-225ENST00000636861 NESP48681 1621 aa7.57□□□□□ -1.2
CHD2-225ENST00000636861 OSCARQ8IYS5 282 aa7.57□□□□□ -1.2
CHD2-225ENST00000636861 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
CHD2-225ENST00000636861 CYB5RLQ6IPT4 315 aa7.52□□□□□ -1.21
CHD2-225ENST00000636861 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
CHD2-225ENST00000636861 ARAP1Q96P48 1450 aa7.49□□□□□ -1.21
CHD2-225ENST00000636861 KDM4FA0A1W2PPD8 638 aa7.48□□□□□ -1.21
CHD2-225ENST00000636861 ERCC6L2Q5T890 1561 aa7.47□□□□□ -1.21
CHD2-225ENST00000636861 KIF21AQ7Z4S6 1674 aa7.46□□□□□ -1.22
CHD2-225ENST00000636861 DCAF8L2P0C7V8 631 aa7.44□□□□□ -1.22
CHD2-225ENST00000636861 HECW2Q9P2P5 1572 aa7.42□□□□□ -1.22
CHD2-225ENST00000636861 DISP3Q9P2K9 1392 aa7.41□□□□□ -1.22
CHD2-225ENST00000636861 SCRIBQ14160 1630 aa7.34□□□□□ -1.23
CHD2-225ENST00000636861 MYO15BQ96JP2 1530 aa7.34□□□□□ -1.23
CHD2-225ENST00000636861 WDR62O43379 1518 aa7.3□□□□□ -1.24
CHD2-225ENST00000636861 SPATA31D1Q6ZQQ2 1576 aa7.29□□□□□ -1.24
CHD2-225ENST00000636861 SYNJ2O15056 1496 aa7.26□□□□□ -1.25
CHD2-225ENST00000636861 NCAPD3P42695 1498 aa7.24□□□□□ -1.25
CHD2-225ENST00000636861 MRC2Q9UBG0 1479 aa7.24□□□□□ -1.25
CHD2-225ENST00000636861 LAMC3Q9Y6N6 1575 aa7.23□□□□□ -1.25
CHD2-225ENST00000636861 KIF13AQ9H1H9 1805 aa7.2□□□□□ -1.26
CHD2-225ENST00000636861 SRCAPQ6ZRS2 3230 aa7.16□□□□□ -1.26
CHD2-225ENST00000636861 PDS5BQ9NTI5 1447 aa7.16□□□□□ -1.26
CHD2-225ENST00000636861 RSF1Q96T23 1441 aaPredicted RBP7.15□□□□□ -1.27
CHD2-225ENST00000636861 CHD1O14646 1710 aa7.15□□□□□ -1.27
CHD2-225ENST00000636861 ADGRL1O94910 1474 aa7.14□□□□□ -1.27
CHD2-225ENST00000636861 PELP1Q8IZL8 1130 aaKnown RBP7.14□□□□□ -1.27
CHD2-225ENST00000636861 HMGXB3Q12766 1538 aa7.11□□□□□ -1.27
CHD2-225ENST00000636861 ATAD2BQ9ULI0 1458 aa7.1□□□□□ -1.27
CHD2-225ENST00000636861 MYT1Q01538 1121 aa7.09□□□□□ -1.27
CHD2-225ENST00000636861 ZNF608Q9ULD9 1512 aaPredicted RBP7.08□□□□□ -1.28
CHD2-225ENST00000636861 SMARCA4P51532 1647 aa7.08□□□□□ -1.28
CHD2-225ENST00000636861 KDM6BO15054 1643 aa7.04□□□□□ -1.28
CHD2-225ENST00000636861 CLASP1Q7Z460 1538 aa7.01□□□□□ -1.29
CHD2-225ENST00000636861 URB2Q14146 1524 aaKnown RBP6.99□□□□□ -1.29
CHD2-225ENST00000636861 EIF4G3O43432 1585 aaKnown RBP6.97□□□□□ -1.29
CHD2-225ENST00000636861 CEP164Q9UPV0 1460 aa6.97□□□□□ -1.29
CHD2-225ENST00000636861 GAPVD1Q14C86 1478 aa6.96□□□□□ -1.3
CHD2-225ENST00000636861 CERKQ8TCT0 537 aa6.95□□□□□ -1.3
CHD2-225ENST00000636861 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
CHD2-225ENST00000636861 TSPOAP1O95153 1857 aa6.93□□□□□ -1.3
CHD2-225ENST00000636861 BAZ1BQ9UIG0 1483 aaKnown RBP6.92□□□□□ -1.3
CHD2-225ENST00000636861 FANCD2Q9BXW9 1451 aa6.9□□□□□ -1.31
CHD2-225ENST00000636861 DCAF1Q9Y4B6 1507 aa6.89□□□□□ -1.31
CHD2-225ENST00000636861 DIP2BQ9P265 1576 aa6.89□□□□□ -1.31
CHD2-225ENST00000636861 ABCC10Q5T3U5 1492 aa6.87□□□□□ -1.31
CHD2-225ENST00000636861 FBLN2P98095 1184 aa6.87□□□□□ -1.31
CHD2-225ENST00000636861 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
CHD2-225ENST00000636861 FAM69CQ0P6D2 419 aa6.85□□□□□ -1.31
CHD2-225ENST00000636861 SNAPC4Q5SXM2 1469 aa6.84□□□□□ -1.31
CHD2-225ENST00000636861 AQRO60306 1485 aaKnown RBP eCLIP6.83□□□□□ -1.32
CHD2-225ENST00000636861 MED1Q15648 1581 aaPredicted RBP6.82□□□□□ -1.32
CHD2-225ENST00000636861 PCF11O94913 1555 aaKnown RBP6.82□□□□□ -1.32
CHD2-225ENST00000636861 PPRC1Q5VV67 1664 aaKnown RBP6.81□□□□□ -1.32
CHD2-225ENST00000636861 ZCCHC6Q5VYS8 1495 aaKnown RBP6.8□□□□□ -1.32
CHD2-225ENST00000636861 COL17A1Q9UMD9 1497 aaPredicted RBP6.8□□□□□ -1.32
CHD2-225ENST00000636861 SYNJ1O43426 1573 aa6.8□□□□□ -1.32
CHD2-225ENST00000636861 TOP2BQ02880 1626 aa6.79□□□□□ -1.32
CHD2-225ENST00000636861 TTBK1Q5TCY1 1321 aaPredicted RBP6.78□□□□□ -1.32
CHD2-225ENST00000636861 PEG3Q9GZU2 1588 aa6.78□□□□□ -1.32
CHD2-225ENST00000636861 IFFO2Q5TF58 517 aa6.78□□□□□ -1.32
CHD2-225ENST00000636861 TARBP1Q13395 1621 aaKnown RBP6.75□□□□□ -1.33
CHD2-225ENST00000636861 MAPKBP1O60336 1514 aa6.74□□□□□ -1.33
CHD2-225ENST00000636861 HSPA2P54652 639 aa6.72□□□□□ -1.33
CHD2-225ENST00000636861 PTPRMP28827 1452 aa6.72□□□□□ -1.33
CHD2-225ENST00000636861 KIF21BO75037 1637 aa6.68□□□□□ -1.34
CHD2-225ENST00000636861 ADAMTSL3P82987 1691 aa6.68□□□□□ -1.34
CHD2-225ENST00000636861 CFTRP13569 1480 aa6.68□□□□□ -1.34
CHD2-225ENST00000636861 TOPBP1Q92547 1522 aa6.68□□□□□ -1.34
CHD2-225ENST00000636861 CEP170Q5SW79 1584 aa6.68□□□□□ -1.34
CHD2-225ENST00000636861 SETD1AO15047 1707 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms