RNA–Protein interactions for RNA: ENST00000636436.1

SYNGAP1-214, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-214ENST00000636436 NISCHQ9Y2I1 1504 aa7.48□□□□□ -1.21
SYNGAP1-214ENST00000636436 ABCC9O60706 1549 aa6.82□□□□□ -1.32
SYNGAP1-214ENST00000636436 CCDC180Q9P1Z9 1646 aa6.77□□□□□ -1.33
SYNGAP1-214ENST00000636436 RB1CC1Q8TDY2 1594 aa6.5□□□□□ -1.37
SYNGAP1-214ENST00000636436 NACADO15069 1562 aa6.43□□□□□ -1.38
SYNGAP1-214ENST00000636436 DCAF8L2P0C7V8 631 aa6.39□□□□□ -1.39
SYNGAP1-214ENST00000636436 DNAJC5BQ9UF47 199 aa6.39□□□□□ -1.39
SYNGAP1-214ENST00000636436 PABPN1Q86U42 306 aaKnown RBP eCLIP6.33□□□□□ -1.4
SYNGAP1-214ENST00000636436 MYO15BQ96JP2 1530 aa6.31□□□□□ -1.4
SYNGAP1-214ENST00000636436 UNC13AQ9UPW8 1703 aa6.25□□□□□ -1.41
SYNGAP1-214ENST00000636436 SHROOM4Q9ULL8 1493 aa6.25□□□□□ -1.41
SYNGAP1-214ENST00000636436 BICRAQ9NZM4 1560 aa6.23□□□□□ -1.41
SYNGAP1-214ENST00000636436 DCAF1Q9Y4B6 1507 aa6.2□□□□□ -1.42
SYNGAP1-214ENST00000636436 ZCCHC6Q5VYS8 1495 aaKnown RBP6.19□□□□□ -1.42
SYNGAP1-214ENST00000636436 CECR2Q9BXF3 1484 aa6.17□□□□□ -1.42
SYNGAP1-214ENST00000636436 CC2D2AQ9P2K1 1620 aa6.15□□□□□ -1.42
SYNGAP1-214ENST00000636436 SCRIBQ14160 1630 aa6.14□□□□□ -1.43
SYNGAP1-214ENST00000636436 EIF4G1Q04637 1599 aaKnown RBP6.13□□□□□ -1.43
SYNGAP1-214ENST00000636436 DNAJC5Q9H3Z4 198 aa6□□□□□ -1.45
SYNGAP1-214ENST00000636436 ERCC6Q03468 1493 aa5.96□□□□□ -1.45
SYNGAP1-214ENST00000636436 CUX2O14529 1486 aa5.96□□□□□ -1.46
SYNGAP1-214ENST00000636436 NCAPD3P42695 1498 aa5.91□□□□□ -1.46
SYNGAP1-214ENST00000636436 SMARCA2P51531 1590 aa5.9□□□□□ -1.46
SYNGAP1-214ENST00000636436 HMGXB3Q12766 1538 aa5.89□□□□□ -1.47
SYNGAP1-214ENST00000636436 ATAD2BQ9ULI0 1458 aa5.88□□□□□ -1.47
SYNGAP1-214ENST00000636436 SMARCA4P51532 1647 aa5.85□□□□□ -1.47
SYNGAP1-214ENST00000636436 BAZ1BQ9UIG0 1483 aaKnown RBP5.85□□□□□ -1.47
SYNGAP1-214ENST00000636436 BAZ1AQ9NRL2 1556 aaPredicted RBP5.84□□□□□ -1.47
SYNGAP1-214ENST00000636436 LAMC3Q9Y6N6 1575 aa5.82□□□□□ -1.48
SYNGAP1-214ENST00000636436 PDS5BQ9NTI5 1447 aa5.82□□□□□ -1.48
SYNGAP1-214ENST00000636436 NESP48681 1621 aa5.81□□□□□ -1.48
SYNGAP1-214ENST00000636436 PEG3Q9GZU2 1588 aa5.8□□□□□ -1.48
SYNGAP1-214ENST00000636436 THOC2Q8NI27 1593 aaKnown RBP5.79□□□□□ -1.48
SYNGAP1-214ENST00000636436 TRIM41Q8WV44 630 aa5.74□□□□□ -1.49
SYNGAP1-214ENST00000636436 CADPSQ9ULU8 1353 aa5.74□□□□□ -1.49
SYNGAP1-214ENST00000636436 MRC2Q9UBG0 1479 aa5.74□□□□□ -1.49
SYNGAP1-214ENST00000636436 KIF21AQ7Z4S6 1674 aa5.74□□□□□ -1.49
SYNGAP1-214ENST00000636436 MROH2BQ7Z745 1585 aa5.73□□□□□ -1.49
SYNGAP1-214ENST00000636436 CEP164Q9UPV0 1460 aa5.71□□□□□ -1.49
SYNGAP1-214ENST00000636436 WDR62O43379 1518 aa5.71□□□□□ -1.5
SYNGAP1-214ENST00000636436 FANCD2Q9BXW9 1451 aa5.68□□□□□ -1.5
SYNGAP1-214ENST00000636436 OSCARQ8IYS5 282 aa5.67□□□□□ -1.5
SYNGAP1-214ENST00000636436 WIZO95785 1651 aa5.66□□□□□ -1.5
SYNGAP1-214ENST00000636436 CFTRP13569 1480 aa5.65□□□□□ -1.5
SYNGAP1-214ENST00000636436 TOP2AP11388 1531 aaKnown RBP5.63□□□□□ -1.51
SYNGAP1-214ENST00000636436 URB2Q14146 1524 aaKnown RBP5.6□□□□□ -1.51
SYNGAP1-214ENST00000636436 RSF1Q96T23 1441 aaPredicted RBP5.6□□□□□ -1.51
SYNGAP1-214ENST00000636436 IFT140Q96RY7 1462 aa5.59□□□□□ -1.51
SYNGAP1-214ENST00000636436 ABCC8Q09428 1581 aa5.59□□□□□ -1.52
SYNGAP1-214ENST00000636436 PRDM2Q13029 1718 aa5.57□□□□□ -1.52
SYNGAP1-214ENST00000636436 RIMBP3CA6NJZ7 1639 aa5.56□□□□□ -1.52
SYNGAP1-214ENST00000636436 RIMBP3BA6NNM3 1639 aa5.56□□□□□ -1.52
SYNGAP1-214ENST00000636436 RIMBP3Q9UFD9 1639 aa5.56□□□□□ -1.52
SYNGAP1-214ENST00000636436 ARHGEF11O15085 1522 aa5.55□□□□□ -1.52
SYNGAP1-214ENST00000636436 TOPBP1Q92547 1522 aa5.54□□□□□ -1.52
SYNGAP1-214ENST00000636436 CCDC88BA6NC98 1476 aa5.54□□□□□ -1.52
SYNGAP1-214ENST00000636436 TRHP20396 242 aaPredicted RBP5.54□□□□□ -1.52
SYNGAP1-214ENST00000636436 EIF4G3O43432 1585 aaKnown RBP5.54□□□□□ -1.52
SYNGAP1-214ENST00000636436 DNMBPQ6XZF7 1577 aa5.54□□□□□ -1.52
SYNGAP1-214ENST00000636436 ZNF608Q9ULD9 1512 aaPredicted RBP5.53□□□□□ -1.52
SYNGAP1-214ENST00000636436 FBLN2P98095 1184 aa5.52□□□□□ -1.53
SYNGAP1-214ENST00000636436 CYB5RLQ6IPT4 315 aa5.52□□□□□ -1.53
SYNGAP1-214ENST00000636436 WDR97A6NE52 1622 aa5.49□□□□□ -1.53
SYNGAP1-214ENST00000636436 AQRO60306 1485 aaKnown RBP eCLIP5.49□□□□□ -1.53
SYNGAP1-214ENST00000636436 POLA1P09884 1462 aaPredicted RBP5.49□□□□□ -1.53
SYNGAP1-214ENST00000636436 TARBP1Q13395 1621 aaKnown RBP5.48□□□□□ -1.53
SYNGAP1-214ENST00000636436 CHD1O14646 1710 aa5.48□□□□□ -1.53
SYNGAP1-214ENST00000636436 ARAP1Q96P48 1450 aa5.48□□□□□ -1.53
SYNGAP1-214ENST00000636436 CHMP7Q8WUX9 453 aaPredicted RBP5.48□□□□□ -1.53
SYNGAP1-214ENST00000636436 SOGA1O94964 1423 aa5.48□□□□□ -1.53
SYNGAP1-214ENST00000636436 SYNJ1O43426 1573 aa5.47□□□□□ -1.53
SYNGAP1-214ENST00000636436 SNAPC4Q5SXM2 1469 aa5.46□□□□□ -1.53
SYNGAP1-214ENST00000636436 MAGI1Q96QZ7 1491 aaPredicted RBP5.46□□□□□ -1.53
SYNGAP1-214ENST00000636436 AEBP2Q6ZN18 517 aaPredicted RBP5.46□□□□□ -1.54
SYNGAP1-214ENST00000636436 GRIN2BQ13224 1484 aa5.45□□□□□ -1.54
SYNGAP1-214ENST00000636436 TDRD9Q8NDG6 1382 aaKnown RBP5.45□□□□□ -1.54
SYNGAP1-214ENST00000636436 FGD5Q6ZNL6 1462 aa5.45□□□□□ -1.54
SYNGAP1-214ENST00000636436 RAD54L2Q9Y4B4 1467 aa5.45□□□□□ -1.54
SYNGAP1-214ENST00000636436 SYNJ2O15056 1496 aa5.44□□□□□ -1.54
SYNGAP1-214ENST00000636436 CLASP1Q7Z460 1538 aa5.43□□□□□ -1.54
SYNGAP1-214ENST00000636436 GAPVD1Q14C86 1478 aa5.41□□□□□ -1.54
SYNGAP1-214ENST00000636436 CUX1P39880 1505 aa5.41□□□□□ -1.54
SYNGAP1-214ENST00000636436 PBRM1Q86U86 1689 aa5.39□□□□□ -1.55
SYNGAP1-214ENST00000636436 WRNQ14191 1432 aaPredicted RBP eCLIP5.39□□□□□ -1.55
SYNGAP1-214ENST00000636436 ABCA10Q8WWZ4 1543 aa5.38□□□□□ -1.55
SYNGAP1-214ENST00000636436 GRIN2AQ12879 1464 aa5.37□□□□□ -1.55
SYNGAP1-214ENST00000636436 ABCA5Q8WWZ7 1642 aa5.37□□□□□ -1.55
SYNGAP1-214ENST00000636436 ADAMTS12P58397 1594 aa5.34□□□□□ -1.55
SYNGAP1-214ENST00000636436 FHAD1B1AJZ9 1412 aa5.34□□□□□ -1.55
SYNGAP1-214ENST00000636436 NUP160Q12769 1436 aa5.34□□□□□ -1.55
SYNGAP1-214ENST00000636436 NPM1P06748 294 aaKnown RBP eCLIP5.34□□□□□ -1.55
SYNGAP1-214ENST00000636436 CEP170Q5SW79 1584 aa5.33□□□□□ -1.56
SYNGAP1-214ENST00000636436 ERICH3Q5RHP9 1530 aa5.33□□□□□ -1.56
SYNGAP1-214ENST00000636436 SUPT5HO00267 1087 aaKnown RBP5.33□□□□□ -1.56
SYNGAP1-214ENST00000636436 TOP2BQ02880 1626 aa5.32□□□□□ -1.56
SYNGAP1-214ENST00000636436 SHROOM2Q13796 1616 aa5.31□□□□□ -1.56
SYNGAP1-214ENST00000636436 BIVM-ERCC5R4GMW8 1640 aa5.31□□□□□ -1.56
SYNGAP1-214ENST00000636436 PRG4Q92954 1404 aaPredicted RBP5.31□□□□□ -1.56
SYNGAP1-214ENST00000636436 ERCC6L2Q5T890 1561 aa5.3□□□□□ -1.56
SYNGAP1-214ENST00000636436 JPH4Q96JJ6 628 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms