RNA–Protein interactions for RNA: ENST00000636366.1

PCCA-211, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-211ENST00000636366 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
PCCA-211ENST00000636366 ABCC9O60706 1549 aa25.23■■□□□ 1.63
PCCA-211ENST00000636366 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
PCCA-211ENST00000636366 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
PCCA-211ENST00000636366 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
PCCA-211ENST00000636366 NACADO15069 1562 aa23.59■■□□□ 1.37
PCCA-211ENST00000636366 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
PCCA-211ENST00000636366 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
PCCA-211ENST00000636366 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
PCCA-211ENST00000636366 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
PCCA-211ENST00000636366 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.3
PCCA-211ENST00000636366 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
PCCA-211ENST00000636366 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
PCCA-211ENST00000636366 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
PCCA-211ENST00000636366 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
PCCA-211ENST00000636366 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
PCCA-211ENST00000636366 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
PCCA-211ENST00000636366 SCRIBQ14160 1630 aa22.59■■□□□ 1.21
PCCA-211ENST00000636366 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
PCCA-211ENST00000636366 CUX2O14529 1486 aa21.89■■□□□ 1.09
PCCA-211ENST00000636366 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
PCCA-211ENST00000636366 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
PCCA-211ENST00000636366 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
PCCA-211ENST00000636366 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
PCCA-211ENST00000636366 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
PCCA-211ENST00000636366 NESP48681 1621 aa21.55■■□□□ 1.04
PCCA-211ENST00000636366 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
PCCA-211ENST00000636366 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
PCCA-211ENST00000636366 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
PCCA-211ENST00000636366 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
PCCA-211ENST00000636366 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
PCCA-211ENST00000636366 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
PCCA-211ENST00000636366 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
PCCA-211ENST00000636366 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
PCCA-211ENST00000636366 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
PCCA-211ENST00000636366 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
PCCA-211ENST00000636366 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.97
PCCA-211ENST00000636366 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.96
PCCA-211ENST00000636366 WDR62O43379 1518 aa21.02■□□□□ 0.96
PCCA-211ENST00000636366 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
PCCA-211ENST00000636366 WIZO95785 1651 aa20.91■□□□□ 0.94
PCCA-211ENST00000636366 OSCARQ8IYS5 282 aa20.89■□□□□ 0.94
PCCA-211ENST00000636366 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
PCCA-211ENST00000636366 CFTRP13569 1480 aa20.8■□□□□ 0.92
PCCA-211ENST00000636366 URB2Q14146 1524 aaKnown RBP20.72■□□□□ 0.91
PCCA-211ENST00000636366 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
PCCA-211ENST00000636366 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
PCCA-211ENST00000636366 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.88
PCCA-211ENST00000636366 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.88
PCCA-211ENST00000636366 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.88
PCCA-211ENST00000636366 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
PCCA-211ENST00000636366 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
PCCA-211ENST00000636366 ARHGEF11O15085 1522 aa20.49■□□□□ 0.87
PCCA-211ENST00000636366 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
PCCA-211ENST00000636366 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
PCCA-211ENST00000636366 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
PCCA-211ENST00000636366 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
PCCA-211ENST00000636366 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
PCCA-211ENST00000636366 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
PCCA-211ENST00000636366 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
PCCA-211ENST00000636366 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
PCCA-211ENST00000636366 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
PCCA-211ENST00000636366 FBLN2P98095 1184 aa20.29■□□□□ 0.84
PCCA-211ENST00000636366 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
PCCA-211ENST00000636366 TARBP1Q13395 1621 aaKnown RBP20.26■□□□□ 0.83
PCCA-211ENST00000636366 CHD1O14646 1710 aa20.25■□□□□ 0.83
PCCA-211ENST00000636366 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
PCCA-211ENST00000636366 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
PCCA-211ENST00000636366 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.82
PCCA-211ENST00000636366 SOGA1O94964 1423 aa20.14■□□□□ 0.81
PCCA-211ENST00000636366 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
PCCA-211ENST00000636366 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
PCCA-211ENST00000636366 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
PCCA-211ENST00000636366 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
PCCA-211ENST00000636366 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.79
PCCA-211ENST00000636366 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
PCCA-211ENST00000636366 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
PCCA-211ENST00000636366 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
PCCA-211ENST00000636366 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
PCCA-211ENST00000636366 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
PCCA-211ENST00000636366 CUX1P39880 1505 aa19.93■□□□□ 0.78
PCCA-211ENST00000636366 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
PCCA-211ENST00000636366 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
PCCA-211ENST00000636366 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
PCCA-211ENST00000636366 ABCA5Q8WWZ7 1642 aa19.74■□□□□ 0.75
PCCA-211ENST00000636366 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
PCCA-211ENST00000636366 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
PCCA-211ENST00000636366 NUP160Q12769 1436 aa19.66■□□□□ 0.74
PCCA-211ENST00000636366 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
PCCA-211ENST00000636366 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
PCCA-211ENST00000636366 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
PCCA-211ENST00000636366 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
PCCA-211ENST00000636366 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
PCCA-211ENST00000636366 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
PCCA-211ENST00000636366 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
PCCA-211ENST00000636366 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
PCCA-211ENST00000636366 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
PCCA-211ENST00000636366 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
PCCA-211ENST00000636366 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
PCCA-211ENST00000636366 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms