RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-215ENST00000635835 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
CACNB4-215ENST00000635835 MYT1Q01538 1121 aa14.57□□□□□ -0.08
CACNB4-215ENST00000635835 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
CACNB4-215ENST00000635835 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
CACNB4-215ENST00000635835 PRKCSHP14314 528 aaPredicted RBP13.47□□□□□ -0.25
CACNB4-215ENST00000635835 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
CACNB4-215ENST00000635835 APLP2Q06481 763 aa13.36□□□□□ -0.27
CACNB4-215ENST00000635835 HRCP23327 699 aa13.15□□□□□ -0.3
CACNB4-215ENST00000635835 BCL11AQ9H165 835 aa13.04□□□□□ -0.32
CACNB4-215ENST00000635835 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
CACNB4-215ENST00000635835 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
CACNB4-215ENST00000635835 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
CACNB4-215ENST00000635835 AEBP2Q6ZN18 517 aaPredicted RBP12.7□□□□□ -0.38
CACNB4-215ENST00000635835 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
CACNB4-215ENST00000635835 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
CACNB4-215ENST00000635835 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
CACNB4-215ENST00000635835 NISCHQ9Y2I1 1504 aa12.41□□□□□ -0.42
CACNB4-215ENST00000635835 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
CACNB4-215ENST00000635835 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
CACNB4-215ENST00000635835 UBE2Q2Q8WVN8 375 aa12.25□□□□□ -0.45
CACNB4-215ENST00000635835 CHIC1Q5VXU3 224 aa12.21□□□□□ -0.46
CACNB4-215ENST00000635835 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.46
CACNB4-215ENST00000635835 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
CACNB4-215ENST00000635835 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
CACNB4-215ENST00000635835 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
CACNB4-215ENST00000635835 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
CACNB4-215ENST00000635835 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
CACNB4-215ENST00000635835 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
CACNB4-215ENST00000635835 PODXL2Q9NZ53 605 aa11.97□□□□□ -0.49
CACNB4-215ENST00000635835 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
CACNB4-215ENST00000635835 PKNOX2Q96KN3 472 aa11.9□□□□□ -0.5
CACNB4-215ENST00000635835 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
CACNB4-215ENST00000635835 ARXQ96QS3 562 aa11.82□□□□□ -0.52
CACNB4-215ENST00000635835 MYT1LQ9UL68 1186 aa11.81□□□□□ -0.52
CACNB4-215ENST00000635835 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
CACNB4-215ENST00000635835 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
CACNB4-215ENST00000635835 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
CACNB4-215ENST00000635835 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
CACNB4-215ENST00000635835 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.53
CACNB4-215ENST00000635835 NEFLP07196 543 aa11.7□□□□□ -0.54
CACNB4-215ENST00000635835 TSHZ2Q9NRE2 1034 aa11.7□□□□□ -0.54
CACNB4-215ENST00000635835 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
CACNB4-215ENST00000635835 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.55
CACNB4-215ENST00000635835 PDIA4P13667 645 aaKnown RBP11.59□□□□□ -0.55
CACNB4-215ENST00000635835 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
CACNB4-215ENST00000635835 PDE4CQ08493 712 aa11.56□□□□□ -0.56
CACNB4-215ENST00000635835 CCDC136Q96JN2 1154 aa11.53□□□□□ -0.56
CACNB4-215ENST00000635835 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
CACNB4-215ENST00000635835 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.58
CACNB4-215ENST00000635835 FGD1P98174 961 aa11.46□□□□□ -0.58
CACNB4-215ENST00000635835 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
CACNB4-215ENST00000635835 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
CACNB4-215ENST00000635835 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
CACNB4-215ENST00000635835 TAF7LQ5H9L4 462 aa11.38□□□□□ -0.59
CACNB4-215ENST00000635835 HOMEZQ8IX15 550 aa11.36□□□□□ -0.59
CACNB4-215ENST00000635835 AAMPQ13685 434 aa11.33□□□□□ -0.6
CACNB4-215ENST00000635835 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
CACNB4-215ENST00000635835 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
CACNB4-215ENST00000635835 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
CACNB4-215ENST00000635835 ZMYND15Q9H091 742 aa11.31□□□□□ -0.6
CACNB4-215ENST00000635835 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
CACNB4-215ENST00000635835 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
CACNB4-215ENST00000635835 MSH5O43196 834 aa11.28□□□□□ -0.6
CACNB4-215ENST00000635835 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
CACNB4-215ENST00000635835 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
CACNB4-215ENST00000635835 POTEDQ86YR6 584 aa11.25□□□□□ -0.61
CACNB4-215ENST00000635835 RSPH6AQ9H0K4 717 aa11.24□□□□□ -0.61
CACNB4-215ENST00000635835 RBM10P98175 930 aaKnown RBP11.23□□□□□ -0.61
CACNB4-215ENST00000635835 A0A0U1RQG5 324 aaPredicted RBP11.19□□□□□ -0.62
CACNB4-215ENST00000635835 YTHDC1Q96MU7 727 aaKnown RBP11.17□□□□□ -0.62
CACNB4-215ENST00000635835 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
CACNB4-215ENST00000635835 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
CACNB4-215ENST00000635835 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
CACNB4-215ENST00000635835 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
CACNB4-215ENST00000635835 BRD2P25440 801 aaKnown RBP11.14□□□□□ -0.63
CACNB4-215ENST00000635835 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
CACNB4-215ENST00000635835 C11orf95C9JLR9 678 aaPredicted RBP11.11□□□□□ -0.63
CACNB4-215ENST00000635835 CCER1Q8TC90 406 aaPredicted RBP11.09□□□□□ -0.63
CACNB4-215ENST00000635835 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
CACNB4-215ENST00000635835 CHMP4AQ9BY43 222 aa11.07□□□□□ -0.64
CACNB4-215ENST00000635835 NPM2Q86SE8 214 aaKnown RBP11.06□□□□□ -0.64
CACNB4-215ENST00000635835 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
CACNB4-215ENST00000635835 MIER1Q8N108 512 aa11.02□□□□□ -0.65
CACNB4-215ENST00000635835 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
CACNB4-215ENST00000635835 SAMD1Q6SPF0 538 aaPredicted RBP10.98□□□□□ -0.65
CACNB4-215ENST00000635835 NAP1L5Q96NT1 182 aaPredicted RBP10.97□□□□□ -0.65
CACNB4-215ENST00000635835 DHX37Q8IY37 1157 aaKnown RBP10.96□□□□□ -0.65
CACNB4-215ENST00000635835 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
CACNB4-215ENST00000635835 RRP9O43818 475 aaKnown RBP10.93□□□□□ -0.66
CACNB4-215ENST00000635835 SENP3Q9H4L4 574 aaPredicted RBP10.93□□□□□ -0.66
CACNB4-215ENST00000635835 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
CACNB4-215ENST00000635835 CDK11AQ9UQ88 783 aaPredicted RBP10.93□□□□□ -0.66
CACNB4-215ENST00000635835 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
CACNB4-215ENST00000635835 FBXO3Q9UK99 471 aa10.93□□□□□ -0.66
CACNB4-215ENST00000635835 WASHC2CQ9Y4E1 1318 aa10.92□□□□□ -0.66
CACNB4-215ENST00000635835 RTL5Q5HYW3 569 aaPredicted RBP10.92□□□□□ -0.66
CACNB4-215ENST00000635835 BCCIPQ9P287 314 aaKnown RBP eCLIP10.91□□□□□ -0.66
CACNB4-215ENST00000635835 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
CACNB4-215ENST00000635835 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
CACNB4-215ENST00000635835 WASHC2AQ641Q2 1341 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms