RNA–Protein interactions for RNA: ENST00000634846.1

AC004554.2-201, humanhuman

TSL 5 BASIC

Gene AC004554.2, Length 1,893 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004554.2-201ENST00000634846 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
AC004554.2-201ENST00000634846 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
AC004554.2-201ENST00000634846 ABCC9O60706 1549 aa27.1■■□□□ 1.93
AC004554.2-201ENST00000634846 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
AC004554.2-201ENST00000634846 NACADO15069 1562 aa25.91■■□□□ 1.74
AC004554.2-201ENST00000634846 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
AC004554.2-201ENST00000634846 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
AC004554.2-201ENST00000634846 ZCCHC6Q5VYS8 1495 aaKnown RBP25.63■■□□□ 1.69
AC004554.2-201ENST00000634846 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
AC004554.2-201ENST00000634846 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
AC004554.2-201ENST00000634846 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
AC004554.2-201ENST00000634846 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
AC004554.2-201ENST00000634846 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
AC004554.2-201ENST00000634846 DNAJC5BQ9UF47 199 aa25.04■■□□□ 1.6
AC004554.2-201ENST00000634846 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
AC004554.2-201ENST00000634846 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
AC004554.2-201ENST00000634846 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
AC004554.2-201ENST00000634846 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
AC004554.2-201ENST00000634846 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
AC004554.2-201ENST00000634846 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.42
AC004554.2-201ENST00000634846 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
AC004554.2-201ENST00000634846 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
AC004554.2-201ENST00000634846 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
AC004554.2-201ENST00000634846 HMGXB3Q12766 1538 aa23.78■■□□□ 1.4
AC004554.2-201ENST00000634846 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
AC004554.2-201ENST00000634846 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
AC004554.2-201ENST00000634846 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
AC004554.2-201ENST00000634846 WIZO95785 1651 aa23.51■■□□□ 1.35
AC004554.2-201ENST00000634846 NESP48681 1621 aa23.4■■□□□ 1.34
AC004554.2-201ENST00000634846 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
AC004554.2-201ENST00000634846 ERCC6Q03468 1493 aa23.35■■□□□ 1.33
AC004554.2-201ENST00000634846 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
AC004554.2-201ENST00000634846 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
AC004554.2-201ENST00000634846 CUX2O14529 1486 aa23.21■■□□□ 1.31
AC004554.2-201ENST00000634846 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
AC004554.2-201ENST00000634846 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
AC004554.2-201ENST00000634846 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
AC004554.2-201ENST00000634846 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
AC004554.2-201ENST00000634846 CFTRP13569 1480 aa22.99■■□□□ 1.27
AC004554.2-201ENST00000634846 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
AC004554.2-201ENST00000634846 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
AC004554.2-201ENST00000634846 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
AC004554.2-201ENST00000634846 CEP164Q9UPV0 1460 aa22.91■■□□□ 1.26
AC004554.2-201ENST00000634846 FANCD2Q9BXW9 1451 aa22.91■■□□□ 1.26
AC004554.2-201ENST00000634846 WDR62O43379 1518 aa22.88■■□□□ 1.25
AC004554.2-201ENST00000634846 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
AC004554.2-201ENST00000634846 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
AC004554.2-201ENST00000634846 TOPBP1Q92547 1522 aa22.54■■□□□ 1.2
AC004554.2-201ENST00000634846 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
AC004554.2-201ENST00000634846 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
AC004554.2-201ENST00000634846 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
AC004554.2-201ENST00000634846 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
AC004554.2-201ENST00000634846 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
AC004554.2-201ENST00000634846 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
AC004554.2-201ENST00000634846 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
AC004554.2-201ENST00000634846 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
AC004554.2-201ENST00000634846 CUX1P39880 1505 aa22.3■■□□□ 1.16
AC004554.2-201ENST00000634846 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
AC004554.2-201ENST00000634846 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
AC004554.2-201ENST00000634846 SOGA1O94964 1423 aa22.2■■□□□ 1.14
AC004554.2-201ENST00000634846 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.14
AC004554.2-201ENST00000634846 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
AC004554.2-201ENST00000634846 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
AC004554.2-201ENST00000634846 CHD1O14646 1710 aa22.1■■□□□ 1.13
AC004554.2-201ENST00000634846 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
AC004554.2-201ENST00000634846 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
AC004554.2-201ENST00000634846 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
AC004554.2-201ENST00000634846 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
AC004554.2-201ENST00000634846 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
AC004554.2-201ENST00000634846 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
AC004554.2-201ENST00000634846 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
AC004554.2-201ENST00000634846 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
AC004554.2-201ENST00000634846 ABCA5Q8WWZ7 1642 aa21.99■■□□□ 1.11
AC004554.2-201ENST00000634846 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
AC004554.2-201ENST00000634846 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.11
AC004554.2-201ENST00000634846 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.11
AC004554.2-201ENST00000634846 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
AC004554.2-201ENST00000634846 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
AC004554.2-201ENST00000634846 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
AC004554.2-201ENST00000634846 FBLN2P98095 1184 aa21.9■■□□□ 1.1
AC004554.2-201ENST00000634846 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
AC004554.2-201ENST00000634846 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
AC004554.2-201ENST00000634846 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
AC004554.2-201ENST00000634846 CLASP1Q7Z460 1538 aa21.82■■□□□ 1.08
AC004554.2-201ENST00000634846 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
AC004554.2-201ENST00000634846 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
AC004554.2-201ENST00000634846 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
AC004554.2-201ENST00000634846 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
AC004554.2-201ENST00000634846 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
AC004554.2-201ENST00000634846 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
AC004554.2-201ENST00000634846 CEP170Q5SW79 1584 aa21.64■■□□□ 1.06
AC004554.2-201ENST00000634846 NUP160Q12769 1436 aa21.62■■□□□ 1.05
AC004554.2-201ENST00000634846 CYB5RLQ6IPT4 315 aa21.6■■□□□ 1.05
AC004554.2-201ENST00000634846 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
AC004554.2-201ENST00000634846 CUL7Q14999 1698 aa21.54■■□□□ 1.04
AC004554.2-201ENST00000634846 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
AC004554.2-201ENST00000634846 IGF1RP08069 1367 aa21.51■■□□□ 1.03
AC004554.2-201ENST00000634846 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
AC004554.2-201ENST00000634846 RUSC2Q8N2Y8 1516 aa21.48■■□□□ 1.03
AC004554.2-201ENST00000634846 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms