RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
BRCA1-230ENST00000634433 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.24
BRCA1-230ENST00000634433 ABCC9O60706 1549 aa13.48□□□□□ -0.25
BRCA1-230ENST00000634433 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
BRCA1-230ENST00000634433 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
BRCA1-230ENST00000634433 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
BRCA1-230ENST00000634433 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
BRCA1-230ENST00000634433 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
BRCA1-230ENST00000634433 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
BRCA1-230ENST00000634433 NACADO15069 1562 aa12.8□□□□□ -0.36
BRCA1-230ENST00000634433 SHROOM4Q9ULL8 1493 aa12.79□□□□□ -0.36
BRCA1-230ENST00000634433 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
BRCA1-230ENST00000634433 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
BRCA1-230ENST00000634433 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
BRCA1-230ENST00000634433 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
BRCA1-230ENST00000634433 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
BRCA1-230ENST00000634433 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
BRCA1-230ENST00000634433 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
BRCA1-230ENST00000634433 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.431e-5■□□□□ 8.6
BRCA1-230ENST00000634433 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
BRCA1-230ENST00000634433 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
BRCA1-230ENST00000634433 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.45
BRCA1-230ENST00000634433 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
BRCA1-230ENST00000634433 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
BRCA1-230ENST00000634433 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
BRCA1-230ENST00000634433 AEBP2Q6ZN18 517 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-230ENST00000634433 RSF1Q96T23 1441 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-230ENST00000634433 CUX2O14529 1486 aa12.02□□□□□ -0.49
BRCA1-230ENST00000634433 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-230ENST00000634433 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
BRCA1-230ENST00000634433 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-230ENST00000634433 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-230ENST00000634433 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
BRCA1-230ENST00000634433 WIZO95785 1651 aa11.88□□□□□ -0.51
BRCA1-230ENST00000634433 KCNA4P22459 653 aa11.83□□□□□ -0.52
BRCA1-230ENST00000634433 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
BRCA1-230ENST00000634433 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
BRCA1-230ENST00000634433 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-230ENST00000634433 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
BRCA1-230ENST00000634433 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
BRCA1-230ENST00000634433 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
BRCA1-230ENST00000634433 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
BRCA1-230ENST00000634433 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
BRCA1-230ENST00000634433 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
BRCA1-230ENST00000634433 HMGXB3Q12766 1538 aa11.69□□□□□ -0.54
BRCA1-230ENST00000634433 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
BRCA1-230ENST00000634433 ATAD2BQ9ULI0 1458 aa11.66□□□□□ -0.54
BRCA1-230ENST00000634433 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
BRCA1-230ENST00000634433 THOC2Q8NI27 1593 aaKnown RBP11.61□□□□□ -0.55
BRCA1-230ENST00000634433 LAMC3Q9Y6N6 1575 aa11.59□□□□□ -0.55
BRCA1-230ENST00000634433 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-230ENST00000634433 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
BRCA1-230ENST00000634433 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
BRCA1-230ENST00000634433 FAM9AQ8IZU1 332 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-230ENST00000634433 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
BRCA1-230ENST00000634433 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
BRCA1-230ENST00000634433 ABCC8Q09428 1581 aa11.46□□□□□ -0.58
BRCA1-230ENST00000634433 NESP48681 1621 aa11.45□□□□□ -0.58
BRCA1-230ENST00000634433 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
BRCA1-230ENST00000634433 EEA1Q15075 1411 aa11.42□□□□□ -0.58
BRCA1-230ENST00000634433 WDR62O43379 1518 aa11.39□□□□□ -0.59
BRCA1-230ENST00000634433 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
BRCA1-230ENST00000634433 APLP2Q06481 763 aa11.36□□□□□ -0.59
BRCA1-230ENST00000634433 CFTRP13569 1480 aa11.34□□□□□ -0.59
BRCA1-230ENST00000634433 SOGA1O94964 1423 aa11.32□□□□□ -0.6
BRCA1-230ENST00000634433 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
BRCA1-230ENST00000634433 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
BRCA1-230ENST00000634433 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-230ENST00000634433 TOP2BQ02880 1626 aa11.28□□□□□ -0.6
BRCA1-230ENST00000634433 BIVM-ERCC5R4GMW8 1640 aa11.26□□□□□ -0.61
BRCA1-230ENST00000634433 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
BRCA1-230ENST00000634433 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
BRCA1-230ENST00000634433 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-230ENST00000634433 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
BRCA1-230ENST00000634433 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
BRCA1-230ENST00000634433 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
BRCA1-230ENST00000634433 RUSC2Q8N2Y8 1516 aa11.23□□□□□ -0.61
BRCA1-230ENST00000634433 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
BRCA1-230ENST00000634433 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.61
BRCA1-230ENST00000634433 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
BRCA1-230ENST00000634433 ARXQ96QS3 562 aa11.2□□□□□ -0.62
BRCA1-230ENST00000634433 CUX1P39880 1505 aa11.2□□□□□ -0.62
BRCA1-230ENST00000634433 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
BRCA1-230ENST00000634433 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
BRCA1-230ENST00000634433 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
BRCA1-230ENST00000634433 KIF21BO75037 1637 aa11.18□□□□□ -0.62
BRCA1-230ENST00000634433 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
BRCA1-230ENST00000634433 FANCD2Q9BXW9 1451 aa11.15□□□□□ -0.62
BRCA1-230ENST00000634433 KIF27Q86VH2 1401 aa11.15□□□□□ -0.63
BRCA1-230ENST00000634433 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
BRCA1-230ENST00000634433 HRCP23327 699 aa11.1□□□□□ -0.63
BRCA1-230ENST00000634433 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
BRCA1-230ENST00000634433 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
BRCA1-230ENST00000634433 PRXQ9BXM0 1461 aa11.09□□□□□ -0.63
BRCA1-230ENST00000634433 ARHGEF11O15085 1522 aa11.08□□□□□ -0.64
BRCA1-230ENST00000634433 IFT140Q96RY7 1462 aa11.08□□□□□ -0.64
BRCA1-230ENST00000634433 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
BRCA1-230ENST00000634433 URB2Q14146 1524 aaKnown RBP11.07□□□□□ -0.64
BRCA1-230ENST00000634433 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
BRCA1-230ENST00000634433 CLIP1P30622 1438 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms