RNA–Protein interactions for RNA: ENST00000633646.1

GRAMD1B-213, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-213ENST00000633646 NISCHQ9Y2I1 1504 aa41.54■■■■■ 4.24
GRAMD1B-213ENST00000633646 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
GRAMD1B-213ENST00000633646 ABCC9O60706 1549 aa36.59■■■■□ 3.45
GRAMD1B-213ENST00000633646 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
GRAMD1B-213ENST00000633646 DCAF8L2P0C7V8 631 aa34.91■■■■□ 3.18
GRAMD1B-213ENST00000633646 NACADO15069 1562 aa34.85■■■■□ 3.17
GRAMD1B-213ENST00000633646 ZCCHC6Q5VYS8 1495 aaKnown RBP34.52■■■■□ 3.12
GRAMD1B-213ENST00000633646 MYO15BQ96JP2 1530 aa34.52■■■■□ 3.12
GRAMD1B-213ENST00000633646 DCAF1Q9Y4B6 1507 aa34.29■■■■□ 3.08
GRAMD1B-213ENST00000633646 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
GRAMD1B-213ENST00000633646 PABPN1Q86U42 306 aaKnown RBP eCLIP34.19■■■■□ 3.06
GRAMD1B-213ENST00000633646 BICRAQ9NZM4 1560 aa33.99■■■■□ 3.03
GRAMD1B-213ENST00000633646 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
GRAMD1B-213ENST00000633646 SCRIBQ14160 1630 aa33.8■■■■□ 3
GRAMD1B-213ENST00000633646 SHROOM4Q9ULL8 1493 aa33.45■■■□□ 2.95
GRAMD1B-213ENST00000633646 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
GRAMD1B-213ENST00000633646 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
GRAMD1B-213ENST00000633646 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
GRAMD1B-213ENST00000633646 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
GRAMD1B-213ENST00000633646 NCAPD3P42695 1498 aa32.21■■■□□ 2.75
GRAMD1B-213ENST00000633646 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
GRAMD1B-213ENST00000633646 BAZ1AQ9NRL2 1556 aaPredicted RBP32.17■■■□□ 2.74
GRAMD1B-213ENST00000633646 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
GRAMD1B-213ENST00000633646 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
GRAMD1B-213ENST00000633646 HMGXB3Q12766 1538 aa31.98■■■□□ 2.71
GRAMD1B-213ENST00000633646 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
GRAMD1B-213ENST00000633646 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
GRAMD1B-213ENST00000633646 WIZO95785 1651 aa31.69■■■□□ 2.66
GRAMD1B-213ENST00000633646 NESP48681 1621 aa31.6■■■□□ 2.65
GRAMD1B-213ENST00000633646 RSF1Q96T23 1441 aaPredicted RBP31.57■■■□□ 2.64
GRAMD1B-213ENST00000633646 ERCC6Q03468 1493 aa31.48■■■□□ 2.63
GRAMD1B-213ENST00000633646 LAMC3Q9Y6N6 1575 aa31.36■■■□□ 2.61
GRAMD1B-213ENST00000633646 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
GRAMD1B-213ENST00000633646 CADPSQ9ULU8 1353 aa31.27■■■□□ 2.6
GRAMD1B-213ENST00000633646 CUX2O14529 1486 aa31.23■■■□□ 2.59
GRAMD1B-213ENST00000633646 PDS5BQ9NTI5 1447 aa31.17■■■□□ 2.58
GRAMD1B-213ENST00000633646 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
GRAMD1B-213ENST00000633646 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
GRAMD1B-213ENST00000633646 CFTRP13569 1480 aa31.01■■■□□ 2.56
GRAMD1B-213ENST00000633646 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
GRAMD1B-213ENST00000633646 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
GRAMD1B-213ENST00000633646 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.53
GRAMD1B-213ENST00000633646 CEP164Q9UPV0 1460 aa30.86■■■□□ 2.53
GRAMD1B-213ENST00000633646 WDR62O43379 1518 aa30.79■■■□□ 2.52
GRAMD1B-213ENST00000633646 DNAJC5Q9H3Z4 198 aa30.69■■■□□ 2.5
GRAMD1B-213ENST00000633646 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
GRAMD1B-213ENST00000633646 URB2Q14146 1524 aaKnown RBP30.64■■■□□ 2.5
GRAMD1B-213ENST00000633646 SUPT5HO00267 1087 aaKnown RBP30.61■■■□□ 2.49
GRAMD1B-213ENST00000633646 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
GRAMD1B-213ENST00000633646 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
GRAMD1B-213ENST00000633646 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
GRAMD1B-213ENST00000633646 IFT140Q96RY7 1462 aa30.22■■■□□ 2.43
GRAMD1B-213ENST00000633646 ZNF608Q9ULD9 1512 aaPredicted RBP30.2■■■□□ 2.42
GRAMD1B-213ENST00000633646 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
GRAMD1B-213ENST00000633646 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
GRAMD1B-213ENST00000633646 CUX1P39880 1505 aa30.06■■■□□ 2.4
GRAMD1B-213ENST00000633646 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
GRAMD1B-213ENST00000633646 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.39
GRAMD1B-213ENST00000633646 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
GRAMD1B-213ENST00000633646 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
GRAMD1B-213ENST00000633646 SOGA1O94964 1423 aa29.99■■■□□ 2.39
GRAMD1B-213ENST00000633646 OSCARQ8IYS5 282 aa29.94■■■□□ 2.38
GRAMD1B-213ENST00000633646 TDRD9Q8NDG6 1382 aaKnown RBP29.9■■■□□ 2.38
GRAMD1B-213ENST00000633646 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
GRAMD1B-213ENST00000633646 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
GRAMD1B-213ENST00000633646 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
GRAMD1B-213ENST00000633646 FBLN2P98095 1184 aa29.69■■■□□ 2.34
GRAMD1B-213ENST00000633646 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
GRAMD1B-213ENST00000633646 CHD1O14646 1710 aa29.68■■■□□ 2.34
GRAMD1B-213ENST00000633646 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
GRAMD1B-213ENST00000633646 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
GRAMD1B-213ENST00000633646 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
GRAMD1B-213ENST00000633646 GRIN2BQ13224 1484 aa29.63■■■□□ 2.33
GRAMD1B-213ENST00000633646 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
GRAMD1B-213ENST00000633646 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
GRAMD1B-213ENST00000633646 ABCA5Q8WWZ7 1642 aa29.57■■■□□ 2.32
GRAMD1B-213ENST00000633646 MAGI1Q96QZ7 1491 aaPredicted RBP29.56■■■□□ 2.32
GRAMD1B-213ENST00000633646 PBRM1Q86U86 1689 aa29.54■■■□□ 2.32
GRAMD1B-213ENST00000633646 CHMP7Q8WUX9 453 aaPredicted RBP29.52■■■□□ 2.32
GRAMD1B-213ENST00000633646 RIMBP3CA6NJZ7 1639 aa29.49■■■□□ 2.31
GRAMD1B-213ENST00000633646 RIMBP3BA6NNM3 1639 aa29.49■■■□□ 2.31
GRAMD1B-213ENST00000633646 RIMBP3Q9UFD9 1639 aa29.49■■■□□ 2.31
GRAMD1B-213ENST00000633646 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
GRAMD1B-213ENST00000633646 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
GRAMD1B-213ENST00000633646 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
GRAMD1B-213ENST00000633646 ADAMTS12P58397 1594 aa29.3■■■□□ 2.28
GRAMD1B-213ENST00000633646 ERICH3Q5RHP9 1530 aa29.28■■■□□ 2.28
GRAMD1B-213ENST00000633646 GRIN2AQ12879 1464 aa29.27■■■□□ 2.28
GRAMD1B-213ENST00000633646 CYB5RLQ6IPT4 315 aa29.25■■■□□ 2.27
GRAMD1B-213ENST00000633646 FHAD1B1AJZ9 1412 aa29.24■■■□□ 2.27
GRAMD1B-213ENST00000633646 ARAP1Q96P48 1450 aa29.22■■■□□ 2.27
GRAMD1B-213ENST00000633646 CEP170Q5SW79 1584 aa29.16■■■□□ 2.26
GRAMD1B-213ENST00000633646 NUP160Q12769 1436 aa29.15■■■□□ 2.26
GRAMD1B-213ENST00000633646 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
GRAMD1B-213ENST00000633646 IGF1RP08069 1367 aa29.11■■■□□ 2.25
GRAMD1B-213ENST00000633646 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.23
GRAMD1B-213ENST00000633646 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
GRAMD1B-213ENST00000633646 CUL7Q14999 1698 aa28.93■■■□□ 2.22
GRAMD1B-213ENST00000633646 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
GRAMD1B-213ENST00000633646 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms