RNA–Protein interactions for RNA: ENST00000633372.1

APOO-205, Transcript of apolipoprotein O, humanhuman

TSL 3

Gene APOO, Length 1,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOO-205ENST00000633372 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.03
APOO-205ENST00000633372 ABCC9O60706 1549 aa36.78■■■■□ 3.48
APOO-205ENST00000633372 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
APOO-205ENST00000633372 DNAJC5BQ9UF47 199 aa34.92■■■■□ 3.18
APOO-205ENST00000633372 RB1CC1Q8TDY2 1594 aa34.78■■■■□ 3.16
APOO-205ENST00000633372 NACADO15069 1562 aa34.43■■■■□ 3.1
APOO-205ENST00000633372 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
APOO-205ENST00000633372 PABPN1Q86U42 306 aaKnown RBP eCLIP34.24■■■■□ 3.07
APOO-205ENST00000633372 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
APOO-205ENST00000633372 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
APOO-205ENST00000633372 BICRAQ9NZM4 1560 aa33.73■■■□□ 2.99
APOO-205ENST00000633372 SHROOM4Q9ULL8 1493 aa33.27■■■□□ 2.92
APOO-205ENST00000633372 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
APOO-205ENST00000633372 DCAF1Q9Y4B6 1507 aa33.2■■■□□ 2.91
APOO-205ENST00000633372 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
APOO-205ENST00000633372 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
APOO-205ENST00000633372 SCRIBQ14160 1630 aa33.05■■■□□ 2.88
APOO-205ENST00000633372 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
APOO-205ENST00000633372 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
APOO-205ENST00000633372 CUX2O14529 1486 aa31.85■■■□□ 2.69
APOO-205ENST00000633372 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
APOO-205ENST00000633372 ERCC6Q03468 1493 aa31.82■■■□□ 2.68
APOO-205ENST00000633372 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
APOO-205ENST00000633372 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
APOO-205ENST00000633372 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
APOO-205ENST00000633372 SMARCA4P51532 1647 aa31.46■■■□□ 2.63
APOO-205ENST00000633372 NESP48681 1621 aa31.45■■■□□ 2.62
APOO-205ENST00000633372 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
APOO-205ENST00000633372 BAZ1AQ9NRL2 1556 aaPredicted RBP31.28■■■□□ 2.6
APOO-205ENST00000633372 PEG3Q9GZU2 1588 aa31.15■■■□□ 2.58
APOO-205ENST00000633372 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
APOO-205ENST00000633372 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
APOO-205ENST00000633372 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
APOO-205ENST00000633372 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
APOO-205ENST00000633372 KIF21AQ7Z4S6 1674 aa30.94■■■□□ 2.54
APOO-205ENST00000633372 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
APOO-205ENST00000633372 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
APOO-205ENST00000633372 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
APOO-205ENST00000633372 WDR62O43379 1518 aa30.66■■■□□ 2.5
APOO-205ENST00000633372 WIZO95785 1651 aa30.58■■■□□ 2.49
APOO-205ENST00000633372 CEP164Q9UPV0 1460 aa30.56■■■□□ 2.48
APOO-205ENST00000633372 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
APOO-205ENST00000633372 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
APOO-205ENST00000633372 CFTRP13569 1480 aa30.38■■■□□ 2.45
APOO-205ENST00000633372 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
APOO-205ENST00000633372 URB2Q14146 1524 aaKnown RBP30.24■■■□□ 2.43
APOO-205ENST00000633372 TOP2AP11388 1531 aaKnown RBP30.19■■■□□ 2.42
APOO-205ENST00000633372 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
APOO-205ENST00000633372 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
APOO-205ENST00000633372 RIMBP3CA6NJZ7 1639 aa29.95■■■□□ 2.38
APOO-205ENST00000633372 RIMBP3BA6NNM3 1639 aa29.95■■■□□ 2.38
APOO-205ENST00000633372 RIMBP3Q9UFD9 1639 aa29.95■■■□□ 2.38
APOO-205ENST00000633372 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
APOO-205ENST00000633372 PRDM2Q13029 1718 aa29.89■■■□□ 2.38
APOO-205ENST00000633372 TOPBP1Q92547 1522 aa29.85■■■□□ 2.37
APOO-205ENST00000633372 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
APOO-205ENST00000633372 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
APOO-205ENST00000633372 CYB5RLQ6IPT4 315 aa29.76■■■□□ 2.35
APOO-205ENST00000633372 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
APOO-205ENST00000633372 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
APOO-205ENST00000633372 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.34
APOO-205ENST00000633372 FBLN2P98095 1184 aa29.65■■■□□ 2.34
APOO-205ENST00000633372 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
APOO-205ENST00000633372 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
APOO-205ENST00000633372 CHD1O14646 1710 aa29.54■■■□□ 2.32
APOO-205ENST00000633372 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
APOO-205ENST00000633372 POLA1P09884 1462 aaPredicted RBP29.51■■■□□ 2.31
APOO-205ENST00000633372 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
APOO-205ENST00000633372 TDRD9Q8NDG6 1382 aaKnown RBP29.44■■■□□ 2.3
APOO-205ENST00000633372 SOGA1O94964 1423 aa29.43■■■□□ 2.3
APOO-205ENST00000633372 CHMP7Q8WUX9 453 aaPredicted RBP29.35■■■□□ 2.29
APOO-205ENST00000633372 SNAPC4Q5SXM2 1469 aa29.32■■■□□ 2.28
APOO-205ENST00000633372 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
APOO-205ENST00000633372 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
APOO-205ENST00000633372 CLASP1Q7Z460 1538 aa29.23■■■□□ 2.27
APOO-205ENST00000633372 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
APOO-205ENST00000633372 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
APOO-205ENST00000633372 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
APOO-205ENST00000633372 CUX1P39880 1505 aa29.15■■■□□ 2.26
APOO-205ENST00000633372 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
APOO-205ENST00000633372 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
APOO-205ENST00000633372 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
APOO-205ENST00000633372 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
APOO-205ENST00000633372 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
APOO-205ENST00000633372 ABCA5Q8WWZ7 1642 aa28.84■■■□□ 2.21
APOO-205ENST00000633372 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
APOO-205ENST00000633372 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
APOO-205ENST00000633372 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
APOO-205ENST00000633372 NUP160Q12769 1436 aa28.71■■■□□ 2.19
APOO-205ENST00000633372 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
APOO-205ENST00000633372 CEP170Q5SW79 1584 aa28.69■■■□□ 2.18
APOO-205ENST00000633372 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
APOO-205ENST00000633372 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
APOO-205ENST00000633372 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
APOO-205ENST00000633372 TOP2BQ02880 1626 aa28.55■■■□□ 2.16
APOO-205ENST00000633372 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
APOO-205ENST00000633372 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
APOO-205ENST00000633372 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
APOO-205ENST00000633372 JPH4Q96JJ6 628 aa28.51■■■□□ 2.15
APOO-205ENST00000633372 NPM1P06748 294 aaKnown RBP eCLIP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms