RNA–Protein interactions for RNA: ENST00000631349.1

COPS7B-225, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5 BASIC

Gene COPS7B, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-225ENST00000631349 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
COPS7B-225ENST00000631349 CCDC180Q9P1Z9 1646 aa13.7□□□□□ -0.22
COPS7B-225ENST00000631349 ABCC9O60706 1549 aa13.27□□□□□ -0.29
COPS7B-225ENST00000631349 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
COPS7B-225ENST00000631349 NACADO15069 1562 aa12.83□□□□□ -0.36
COPS7B-225ENST00000631349 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
COPS7B-225ENST00000631349 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
COPS7B-225ENST00000631349 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
COPS7B-225ENST00000631349 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
COPS7B-225ENST00000631349 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
COPS7B-225ENST00000631349 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.41
COPS7B-225ENST00000631349 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
COPS7B-225ENST00000631349 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
COPS7B-225ENST00000631349 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
COPS7B-225ENST00000631349 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
COPS7B-225ENST00000631349 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
COPS7B-225ENST00000631349 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
COPS7B-225ENST00000631349 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
COPS7B-225ENST00000631349 SMARCA4P51532 1647 aa11.96□□□□□ -0.5
COPS7B-225ENST00000631349 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
COPS7B-225ENST00000631349 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
COPS7B-225ENST00000631349 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
COPS7B-225ENST00000631349 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
COPS7B-225ENST00000631349 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
COPS7B-225ENST00000631349 SMARCA2P51531 1590 aa11.82□□□□□ -0.52
COPS7B-225ENST00000631349 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
COPS7B-225ENST00000631349 WIZO95785 1651 aa11.77□□□□□ -0.53
COPS7B-225ENST00000631349 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-225ENST00000631349 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
COPS7B-225ENST00000631349 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
COPS7B-225ENST00000631349 NESP48681 1621 aa11.54□□□□□ -0.56
COPS7B-225ENST00000631349 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
COPS7B-225ENST00000631349 CCDC88BA6NC98 1476 aa11.48□□□□□ -0.57
COPS7B-225ENST00000631349 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
COPS7B-225ENST00000631349 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
COPS7B-225ENST00000631349 CFTRP13569 1480 aa11.44□□□□□ -0.58
COPS7B-225ENST00000631349 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
COPS7B-225ENST00000631349 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
COPS7B-225ENST00000631349 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
COPS7B-225ENST00000631349 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
COPS7B-225ENST00000631349 SUPT5HO00267 1087 aaKnown RBP11.37□□□□□ -0.59
COPS7B-225ENST00000631349 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
COPS7B-225ENST00000631349 CUX2O14529 1486 aa11.31□□□□□ -0.6
COPS7B-225ENST00000631349 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
COPS7B-225ENST00000631349 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
COPS7B-225ENST00000631349 WDR62O43379 1518 aa11.29□□□□□ -0.6
COPS7B-225ENST00000631349 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
COPS7B-225ENST00000631349 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
COPS7B-225ENST00000631349 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
COPS7B-225ENST00000631349 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
COPS7B-225ENST00000631349 CUX1P39880 1505 aa11.14□□□□□ -0.63
COPS7B-225ENST00000631349 TARBP1Q13395 1621 aaKnown RBP11.1□□□□□ -0.63
COPS7B-225ENST00000631349 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
COPS7B-225ENST00000631349 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
COPS7B-225ENST00000631349 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
COPS7B-225ENST00000631349 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
COPS7B-225ENST00000631349 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
COPS7B-225ENST00000631349 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
COPS7B-225ENST00000631349 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
COPS7B-225ENST00000631349 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
COPS7B-225ENST00000631349 WRNQ14191 1432 aaPredicted RBP eCLIP11.03□□□□□ -0.64
COPS7B-225ENST00000631349 RAD54L2Q9Y4B4 1467 aa11.03□□□□□ -0.64
COPS7B-225ENST00000631349 EIF4G3O43432 1585 aaKnown RBP11.01□□□□□ -0.65
COPS7B-225ENST00000631349 SOGA1O94964 1423 aa11.01□□□□□ -0.65
COPS7B-225ENST00000631349 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.65
COPS7B-225ENST00000631349 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
COPS7B-225ENST00000631349 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
COPS7B-225ENST00000631349 TDRD9Q8NDG6 1382 aaKnown RBP10.93□□□□□ -0.66
COPS7B-225ENST00000631349 PBRM1Q86U86 1689 aa10.93□□□□□ -0.66
COPS7B-225ENST00000631349 CHD1O14646 1710 aa10.89□□□□□ -0.67
COPS7B-225ENST00000631349 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
COPS7B-225ENST00000631349 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
COPS7B-225ENST00000631349 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
COPS7B-225ENST00000631349 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
COPS7B-225ENST00000631349 MAGI1Q96QZ7 1491 aaPredicted RBP10.86□□□□□ -0.67
COPS7B-225ENST00000631349 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
COPS7B-225ENST00000631349 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
COPS7B-225ENST00000631349 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
COPS7B-225ENST00000631349 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
COPS7B-225ENST00000631349 KIF27Q86VH2 1401 aa10.78□□□□□ -0.68
COPS7B-225ENST00000631349 IGF1RP08069 1367 aa10.77□□□□□ -0.68
COPS7B-225ENST00000631349 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.69
COPS7B-225ENST00000631349 RUSC2Q8N2Y8 1516 aa10.77□□□□□ -0.69
COPS7B-225ENST00000631349 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
COPS7B-225ENST00000631349 GRIN2AQ12879 1464 aa10.76□□□□□ -0.69
COPS7B-225ENST00000631349 CUL7Q14999 1698 aa10.75□□□□□ -0.69
COPS7B-225ENST00000631349 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
COPS7B-225ENST00000631349 NUP160Q12769 1436 aa10.74□□□□□ -0.69
COPS7B-225ENST00000631349 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
COPS7B-225ENST00000631349 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
COPS7B-225ENST00000631349 FBLN2P98095 1184 aa10.72□□□□□ -0.69
COPS7B-225ENST00000631349 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
COPS7B-225ENST00000631349 RIMBP3CA6NJZ7 1639 aa10.7□□□□□ -0.7
COPS7B-225ENST00000631349 RIMBP3BA6NNM3 1639 aa10.7□□□□□ -0.7
COPS7B-225ENST00000631349 RIMBP3Q9UFD9 1639 aa10.7□□□□□ -0.7
COPS7B-225ENST00000631349 SHROOM2Q13796 1616 aa10.69□□□□□ -0.7
COPS7B-225ENST00000631349 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
COPS7B-225ENST00000631349 CARMIL1Q5VZK9 1371 aa10.68□□□□□ -0.7
COPS7B-225ENST00000631349 PRXQ9BXM0 1461 aa10.65□□□□□ -0.7
COPS7B-225ENST00000631349 RAPGEF2Q9Y4G8 1499 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms