RNA–Protein interactions for RNA: ENST00000630585.1

UBA3-212, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 4 BASIC

Gene UBA3, Length 390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-212ENST00000630585 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
UBA3-212ENST00000630585 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
UBA3-212ENST00000630585 ABCC9O60706 1549 aa26.95■■□□□ 1.91
UBA3-212ENST00000630585 RB1CC1Q8TDY2 1594 aa25.71■■□□□ 1.71
UBA3-212ENST00000630585 NACADO15069 1562 aa25.55■■□□□ 1.68
UBA3-212ENST00000630585 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
UBA3-212ENST00000630585 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
UBA3-212ENST00000630585 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
UBA3-212ENST00000630585 UNC13AQ9UPW8 1703 aa25.16■■□□□ 1.62
UBA3-212ENST00000630585 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
UBA3-212ENST00000630585 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
UBA3-212ENST00000630585 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
UBA3-212ENST00000630585 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
UBA3-212ENST00000630585 SCRIBQ14160 1630 aa24.64■■□□□ 1.54
UBA3-212ENST00000630585 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
UBA3-212ENST00000630585 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
UBA3-212ENST00000630585 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
UBA3-212ENST00000630585 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
UBA3-212ENST00000630585 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
UBA3-212ENST00000630585 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
UBA3-212ENST00000630585 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
UBA3-212ENST00000630585 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
UBA3-212ENST00000630585 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
UBA3-212ENST00000630585 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
UBA3-212ENST00000630585 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
UBA3-212ENST00000630585 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
UBA3-212ENST00000630585 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
UBA3-212ENST00000630585 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
UBA3-212ENST00000630585 CUX2O14529 1486 aa23.19■■□□□ 1.3
UBA3-212ENST00000630585 NESP48681 1621 aa23.18■■□□□ 1.3
UBA3-212ENST00000630585 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
UBA3-212ENST00000630585 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
UBA3-212ENST00000630585 WIZO95785 1651 aa23■■□□□ 1.27
UBA3-212ENST00000630585 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
UBA3-212ENST00000630585 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
UBA3-212ENST00000630585 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
UBA3-212ENST00000630585 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
UBA3-212ENST00000630585 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
UBA3-212ENST00000630585 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
UBA3-212ENST00000630585 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
UBA3-212ENST00000630585 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
UBA3-212ENST00000630585 WDR62O43379 1518 aa22.62■■□□□ 1.21
UBA3-212ENST00000630585 CFTRP13569 1480 aa22.61■■□□□ 1.21
UBA3-212ENST00000630585 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
UBA3-212ENST00000630585 PRDM2Q13029 1718 aa22.45■■□□□ 1.19
UBA3-212ENST00000630585 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
UBA3-212ENST00000630585 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
UBA3-212ENST00000630585 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
UBA3-212ENST00000630585 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
UBA3-212ENST00000630585 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
UBA3-212ENST00000630585 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
UBA3-212ENST00000630585 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
UBA3-212ENST00000630585 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
UBA3-212ENST00000630585 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
UBA3-212ENST00000630585 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
UBA3-212ENST00000630585 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
UBA3-212ENST00000630585 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
UBA3-212ENST00000630585 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.11e-9■■■■■ 37.7
UBA3-212ENST00000630585 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
UBA3-212ENST00000630585 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
UBA3-212ENST00000630585 SOGA1O94964 1423 aa21.89■■□□□ 1.09
UBA3-212ENST00000630585 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
UBA3-212ENST00000630585 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
UBA3-212ENST00000630585 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
UBA3-212ENST00000630585 CHD1O14646 1710 aa21.86■■□□□ 1.09
UBA3-212ENST00000630585 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
UBA3-212ENST00000630585 CUX1P39880 1505 aa21.84■■□□□ 1.09
UBA3-212ENST00000630585 TDRD9Q8NDG6 1382 aaKnown RBP21.83■■□□□ 1.08
UBA3-212ENST00000630585 FBLN2P98095 1184 aa21.82■■□□□ 1.08
UBA3-212ENST00000630585 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
UBA3-212ENST00000630585 WDR97A6NE52 1622 aa21.77■■□□□ 1.08
UBA3-212ENST00000630585 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
UBA3-212ENST00000630585 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
UBA3-212ENST00000630585 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
UBA3-212ENST00000630585 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
UBA3-212ENST00000630585 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
UBA3-212ENST00000630585 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
UBA3-212ENST00000630585 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
UBA3-212ENST00000630585 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
UBA3-212ENST00000630585 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
UBA3-212ENST00000630585 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
UBA3-212ENST00000630585 ARAP1Q96P48 1450 aa21.58■■□□□ 1.04
UBA3-212ENST00000630585 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
UBA3-212ENST00000630585 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
UBA3-212ENST00000630585 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
UBA3-212ENST00000630585 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
UBA3-212ENST00000630585 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
UBA3-212ENST00000630585 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
UBA3-212ENST00000630585 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
UBA3-212ENST00000630585 ADAMTS12P58397 1594 aa21.39■■□□□ 1.01
UBA3-212ENST00000630585 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
UBA3-212ENST00000630585 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
UBA3-212ENST00000630585 CEP170Q5SW79 1584 aa21.31■■□□□ 1
UBA3-212ENST00000630585 NUP160Q12769 1436 aa21.3■■□□□ 1
UBA3-212ENST00000630585 ERCC6L2Q5T890 1561 aa21.24■□□□□ 0.99
UBA3-212ENST00000630585 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
UBA3-212ENST00000630585 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
UBA3-212ENST00000630585 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
UBA3-212ENST00000630585 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
UBA3-212ENST00000630585 IGF1RP08069 1367 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms