RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
DDX49-214ENST00000629999 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
DDX49-214ENST00000629999 ZCCHC6Q5VYS8 1495 aaKnown RBP28■■■□□ 2.07
DDX49-214ENST00000629999 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
DDX49-214ENST00000629999 ABCC9O60706 1549 aa27.64■■■□□ 2.01
DDX49-214ENST00000629999 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
DDX49-214ENST00000629999 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
DDX49-214ENST00000629999 MYO15BQ96JP2 1530 aa27.15■■□□□ 1.94
DDX49-214ENST00000629999 NACADO15069 1562 aa27.07■■□□□ 1.92
DDX49-214ENST00000629999 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
DDX49-214ENST00000629999 SCRIBQ14160 1630 aa26.84■■□□□ 1.89
DDX49-214ENST00000629999 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
DDX49-214ENST00000629999 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
DDX49-214ENST00000629999 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
DDX49-214ENST00000629999 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
DDX49-214ENST00000629999 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
DDX49-214ENST00000629999 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
DDX49-214ENST00000629999 MROH2BQ7Z745 1585 aa25.79■■□□□ 1.72
DDX49-214ENST00000629999 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
DDX49-214ENST00000629999 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
DDX49-214ENST00000629999 WIZO95785 1651 aa25.6■■□□□ 1.69
DDX49-214ENST00000629999 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
DDX49-214ENST00000629999 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
DDX49-214ENST00000629999 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
DDX49-214ENST00000629999 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
DDX49-214ENST00000629999 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
DDX49-214ENST00000629999 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
DDX49-214ENST00000629999 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
DDX49-214ENST00000629999 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
DDX49-214ENST00000629999 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
DDX49-214ENST00000629999 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
DDX49-214ENST00000629999 HMGXB3Q12766 1538 aa24.95■■□□□ 1.59
DDX49-214ENST00000629999 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
DDX49-214ENST00000629999 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
DDX49-214ENST00000629999 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
DDX49-214ENST00000629999 CFTRP13569 1480 aa24.44■■□□□ 1.5
DDX49-214ENST00000629999 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
DDX49-214ENST00000629999 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
DDX49-214ENST00000629999 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
DDX49-214ENST00000629999 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
DDX49-214ENST00000629999 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
DDX49-214ENST00000629999 NESP48681 1621 aa24.25■■□□□ 1.47
DDX49-214ENST00000629999 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
DDX49-214ENST00000629999 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.46
DDX49-214ENST00000629999 TOP2BQ02880 1626 aa24.14■■□□□ 1.45
DDX49-214ENST00000629999 LOC105371045A0A1W2PR82 267 aa24.13■■□□□ 1.45
DDX49-214ENST00000629999 CUX1P39880 1505 aa24.12■■□□□ 1.45
DDX49-214ENST00000629999 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
DDX49-214ENST00000629999 SOGA1O94964 1423 aa24.08■■□□□ 1.45
DDX49-214ENST00000629999 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
DDX49-214ENST00000629999 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
DDX49-214ENST00000629999 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
DDX49-214ENST00000629999 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
DDX49-214ENST00000629999 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
DDX49-214ENST00000629999 EEA1Q15075 1411 aa23.92■■□□□ 1.42
DDX49-214ENST00000629999 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.42
DDX49-214ENST00000629999 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
DDX49-214ENST00000629999 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
DDX49-214ENST00000629999 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
DDX49-214ENST00000629999 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
DDX49-214ENST00000629999 POLA1P09884 1462 aaPredicted RBP23.75■■□□□ 1.39
DDX49-214ENST00000629999 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
DDX49-214ENST00000629999 CUX2O14529 1486 aa23.73■■□□□ 1.39
DDX49-214ENST00000629999 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
DDX49-214ENST00000629999 ERCC6Q03468 1493 aa23.7■■□□□ 1.38
DDX49-214ENST00000629999 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
DDX49-214ENST00000629999 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
DDX49-214ENST00000629999 KIF21BO75037 1637 aa23.65■■□□□ 1.38
DDX49-214ENST00000629999 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
DDX49-214ENST00000629999 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
DDX49-214ENST00000629999 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
DDX49-214ENST00000629999 WDR62O43379 1518 aa23.56■■□□□ 1.36
DDX49-214ENST00000629999 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
DDX49-214ENST00000629999 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
DDX49-214ENST00000629999 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
DDX49-214ENST00000629999 IGF1RP08069 1367 aa23.52■■□□□ 1.36
DDX49-214ENST00000629999 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
DDX49-214ENST00000629999 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
DDX49-214ENST00000629999 ERICH3Q5RHP9 1530 aa23.48■■□□□ 1.35
DDX49-214ENST00000629999 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
DDX49-214ENST00000629999 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
DDX49-214ENST00000629999 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
DDX49-214ENST00000629999 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
DDX49-214ENST00000629999 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
DDX49-214ENST00000629999 IFT140Q96RY7 1462 aa23.39■■□□□ 1.33
DDX49-214ENST00000629999 RANGAP1P46060 587 aaPredicted RBP23.35■■□□□ 1.33
DDX49-214ENST00000629999 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.33
DDX49-214ENST00000629999 CUL7Q14999 1698 aa23.33■■□□□ 1.33
DDX49-214ENST00000629999 ZNF608Q9ULD9 1512 aaPredicted RBP23.32■■□□□ 1.32
DDX49-214ENST00000629999 CLIP1P30622 1438 aa23.3■■□□□ 1.32
DDX49-214ENST00000629999 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
DDX49-214ENST00000629999 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
DDX49-214ENST00000629999 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
DDX49-214ENST00000629999 ADAMTS12P58397 1594 aa23.15■■□□□ 1.3
DDX49-214ENST00000629999 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
DDX49-214ENST00000629999 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
DDX49-214ENST00000629999 PPARGC1BQ86YN6 1023 aaKnown RBP23.09■■□□□ 1.29
DDX49-214ENST00000629999 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
DDX49-214ENST00000629999 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
DDX49-214ENST00000629999 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms