RNA–Protein interactions for RNA: ENST00000627440.2

SNAP23-223, Transcript of synaptosome associated protein 23, humanhuman

TSL 5 BASIC

Gene SNAP23, Length 210 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-223ENST00000627440 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
SNAP23-223ENST00000627440 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
SNAP23-223ENST00000627440 ABCC9O60706 1549 aa18.06■□□□□ 0.48
SNAP23-223ENST00000627440 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
SNAP23-223ENST00000627440 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
SNAP23-223ENST00000627440 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNAP23-223ENST00000627440 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
SNAP23-223ENST00000627440 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
SNAP23-223ENST00000627440 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
SNAP23-223ENST00000627440 CUX2O14529 1486 aa16.28■□□□□ 0.2
SNAP23-223ENST00000627440 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
SNAP23-223ENST00000627440 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
SNAP23-223ENST00000627440 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
SNAP23-223ENST00000627440 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
SNAP23-223ENST00000627440 NACADO15069 1562 aa15.9■□□□□ 0.14
SNAP23-223ENST00000627440 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
SNAP23-223ENST00000627440 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
SNAP23-223ENST00000627440 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
SNAP23-223ENST00000627440 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
SNAP23-223ENST00000627440 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
SNAP23-223ENST00000627440 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
SNAP23-223ENST00000627440 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
SNAP23-223ENST00000627440 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
SNAP23-223ENST00000627440 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
SNAP23-223ENST00000627440 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
SNAP23-223ENST00000627440 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
SNAP23-223ENST00000627440 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
SNAP23-223ENST00000627440 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
SNAP23-223ENST00000627440 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
SNAP23-223ENST00000627440 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
SNAP23-223ENST00000627440 LMTK3Q96Q04 1460 aa15□□□□□ -0.01
SNAP23-223ENST00000627440 NESP48681 1621 aa14.99□□□□□ -0.01
SNAP23-223ENST00000627440 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
SNAP23-223ENST00000627440 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
SNAP23-223ENST00000627440 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
SNAP23-223ENST00000627440 SOCS7O14512 581 aa14.95□□□□□ -0.02
SNAP23-223ENST00000627440 FBXO41Q8TF61 875 aa14.8□□□□□ -0.04
SNAP23-223ENST00000627440 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
SNAP23-223ENST00000627440 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
SNAP23-223ENST00000627440 ILDR2Q71H61 639 aa14.69□□□□□ -0.06
SNAP23-223ENST00000627440 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
SNAP23-223ENST00000627440 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
SNAP23-223ENST00000627440 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
SNAP23-223ENST00000627440 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
SNAP23-223ENST00000627440 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
SNAP23-223ENST00000627440 WDR62O43379 1518 aa14.61□□□□□ -0.07
SNAP23-223ENST00000627440 KDM4FA0A1W2PPD8 638 aa14.58□□□□□ -0.08
SNAP23-223ENST00000627440 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
SNAP23-223ENST00000627440 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
SNAP23-223ENST00000627440 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
SNAP23-223ENST00000627440 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
SNAP23-223ENST00000627440 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
SNAP23-223ENST00000627440 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
SNAP23-223ENST00000627440 SYNJ2O15056 1496 aa14.28□□□□□ -0.12
SNAP23-223ENST00000627440 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
SNAP23-223ENST00000627440 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
SNAP23-223ENST00000627440 SPATA31D1Q6ZQQ2 1576 aa14.21□□□□□ -0.14
SNAP23-223ENST00000627440 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
SNAP23-223ENST00000627440 CHD1O14646 1710 aa14.15□□□□□ -0.14
SNAP23-223ENST00000627440 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
SNAP23-223ENST00000627440 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
SNAP23-223ENST00000627440 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
SNAP23-223ENST00000627440 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
SNAP23-223ENST00000627440 FBLN2P98095 1184 aa14.07□□□□□ -0.16
SNAP23-223ENST00000627440 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
SNAP23-223ENST00000627440 KDM6BO15054 1643 aa14.04□□□□□ -0.16
SNAP23-223ENST00000627440 KIF13AQ9H1H9 1805 aa14.04□□□□□ -0.16
SNAP23-223ENST00000627440 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
SNAP23-223ENST00000627440 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
SNAP23-223ENST00000627440 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
SNAP23-223ENST00000627440 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
SNAP23-223ENST00000627440 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
SNAP23-223ENST00000627440 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
SNAP23-223ENST00000627440 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
SNAP23-223ENST00000627440 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
SNAP23-223ENST00000627440 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
SNAP23-223ENST00000627440 PEG3Q9GZU2 1588 aa13.82□□□□□ -0.2
SNAP23-223ENST00000627440 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNAP23-223ENST00000627440 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
SNAP23-223ENST00000627440 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
SNAP23-223ENST00000627440 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
SNAP23-223ENST00000627440 CHMP7Q8WUX9 453 aaPredicted RBP13.67□□□□□ -0.22
SNAP23-223ENST00000627440 CFTRP13569 1480 aa13.65□□□□□ -0.22
SNAP23-223ENST00000627440 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
SNAP23-223ENST00000627440 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
SNAP23-223ENST00000627440 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
SNAP23-223ENST00000627440 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
SNAP23-223ENST00000627440 MAPKBP1O60336 1514 aa13.55□□□□□ -0.24
SNAP23-223ENST00000627440 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
SNAP23-223ENST00000627440 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
SNAP23-223ENST00000627440 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
SNAP23-223ENST00000627440 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNAP23-223ENST00000627440 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
SNAP23-223ENST00000627440 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
SNAP23-223ENST00000627440 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
SNAP23-223ENST00000627440 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
SNAP23-223ENST00000627440 PTPRMP28827 1452 aa13.39□□□□□ -0.27
SNAP23-223ENST00000627440 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
SNAP23-223ENST00000627440 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
SNAP23-223ENST00000627440 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms