RNA–Protein interactions for RNA: ENST00000626725.1

NSL1-206, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

TSL 2 BASIC

Gene NSL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-206ENST00000626725 NISCHQ9Y2I1 1504 aa26.88■■□□□ 1.89
NSL1-206ENST00000626725 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
NSL1-206ENST00000626725 ABCC9O60706 1549 aa22.98■■□□□ 1.27
NSL1-206ENST00000626725 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
NSL1-206ENST00000626725 NACADO15069 1562 aa22.22■■□□□ 1.15
NSL1-206ENST00000626725 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
NSL1-206ENST00000626725 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
NSL1-206ENST00000626725 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
NSL1-206ENST00000626725 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
NSL1-206ENST00000626725 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
NSL1-206ENST00000626725 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
NSL1-206ENST00000626725 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
NSL1-206ENST00000626725 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
NSL1-206ENST00000626725 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
NSL1-206ENST00000626725 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
NSL1-206ENST00000626725 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
NSL1-206ENST00000626725 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
NSL1-206ENST00000626725 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
NSL1-206ENST00000626725 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
NSL1-206ENST00000626725 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
NSL1-206ENST00000626725 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
NSL1-206ENST00000626725 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
NSL1-206ENST00000626725 WIZO95785 1651 aa20.65■□□□□ 0.9
NSL1-206ENST00000626725 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
NSL1-206ENST00000626725 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
NSL1-206ENST00000626725 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.88
NSL1-206ENST00000626725 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
NSL1-206ENST00000626725 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
NSL1-206ENST00000626725 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
NSL1-206ENST00000626725 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
NSL1-206ENST00000626725 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
NSL1-206ENST00000626725 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
NSL1-206ENST00000626725 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
NSL1-206ENST00000626725 NESP48681 1621 aa20.05■□□□□ 0.8
NSL1-206ENST00000626725 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
NSL1-206ENST00000626725 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
NSL1-206ENST00000626725 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
NSL1-206ENST00000626725 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
NSL1-206ENST00000626725 CFTRP13569 1480 aa19.87■□□□□ 0.77
NSL1-206ENST00000626725 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
NSL1-206ENST00000626725 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
NSL1-206ENST00000626725 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
NSL1-206ENST00000626725 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
NSL1-206ENST00000626725 PDS5BQ9NTI5 1447 aa19.65■□□□□ 0.74
NSL1-206ENST00000626725 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
NSL1-206ENST00000626725 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.73
NSL1-206ENST00000626725 WDR62O43379 1518 aa19.56■□□□□ 0.72
NSL1-206ENST00000626725 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
NSL1-206ENST00000626725 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
NSL1-206ENST00000626725 CUX1P39880 1505 aa19.5■□□□□ 0.71
NSL1-206ENST00000626725 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
NSL1-206ENST00000626725 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
NSL1-206ENST00000626725 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
NSL1-206ENST00000626725 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
NSL1-206ENST00000626725 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
NSL1-206ENST00000626725 CUX2O14529 1486 aa19.36■□□□□ 0.69
NSL1-206ENST00000626725 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
NSL1-206ENST00000626725 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
NSL1-206ENST00000626725 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
NSL1-206ENST00000626725 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
NSL1-206ENST00000626725 TARBP1Q13395 1621 aaKnown RBP19.32■□□□□ 0.68
NSL1-206ENST00000626725 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
NSL1-206ENST00000626725 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
NSL1-206ENST00000626725 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
NSL1-206ENST00000626725 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
NSL1-206ENST00000626725 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
NSL1-206ENST00000626725 SOGA1O94964 1423 aa19.12■□□□□ 0.65
NSL1-206ENST00000626725 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
NSL1-206ENST00000626725 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
NSL1-206ENST00000626725 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.641e-7■■■□□ 16.7
NSL1-206ENST00000626725 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
NSL1-206ENST00000626725 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
NSL1-206ENST00000626725 CHD1O14646 1710 aa18.96■□□□□ 0.63
NSL1-206ENST00000626725 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
NSL1-206ENST00000626725 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
NSL1-206ENST00000626725 ADAMTS12P58397 1594 aa18.92■□□□□ 0.62
NSL1-206ENST00000626725 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
NSL1-206ENST00000626725 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
NSL1-206ENST00000626725 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
NSL1-206ENST00000626725 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
NSL1-206ENST00000626725 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
NSL1-206ENST00000626725 CUL7Q14999 1698 aa18.81■□□□□ 0.6
NSL1-206ENST00000626725 IGF1RP08069 1367 aa18.78■□□□□ 0.6
NSL1-206ENST00000626725 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
NSL1-206ENST00000626725 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
NSL1-206ENST00000626725 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
NSL1-206ENST00000626725 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
NSL1-206ENST00000626725 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
NSL1-206ENST00000626725 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
NSL1-206ENST00000626725 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
NSL1-206ENST00000626725 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.57
NSL1-206ENST00000626725 EEA1Q15075 1411 aa18.64■□□□□ 0.57
NSL1-206ENST00000626725 KIF21BO75037 1637 aa18.63■□□□□ 0.57
NSL1-206ENST00000626725 CARMIL1Q5VZK9 1371 aa18.63■□□□□ 0.57
NSL1-206ENST00000626725 NUP160Q12769 1436 aa18.62■□□□□ 0.57
NSL1-206ENST00000626725 CTTNBP2Q8WZ74 1663 aa18.62■□□□□ 0.57
NSL1-206ENST00000626725 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
NSL1-206ENST00000626725 FBLN2P98095 1184 aa18.6■□□□□ 0.57
NSL1-206ENST00000626725 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
NSL1-206ENST00000626725 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms