RNA–Protein interactions for RNA: ENST00000625572.1

MIR3653-201, Transcript of microRNA 3653, humanhuman

BASIC

Gene MIR3653, Length 110 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3653-201ENST00000625572 NISCHQ9Y2I1 1504 aa10.69□□□□□ -0.7
MIR3653-201ENST00000625572 ABCC9O60706 1549 aa9.56□□□□□ -0.88
MIR3653-201ENST00000625572 CCDC180Q9P1Z9 1646 aa9.46□□□□□ -0.89
MIR3653-201ENST00000625572 RB1CC1Q8TDY2 1594 aa9.07□□□□□ -0.96
MIR3653-201ENST00000625572 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
MIR3653-201ENST00000625572 NACADO15069 1562 aa9.05□□□□□ -0.96
MIR3653-201ENST00000625572 DNAJC5BQ9UF47 199 aa9.04□□□□□ -0.96
MIR3653-201ENST00000625572 MYO15BQ96JP2 1530 aa8.98□□□□□ -0.97
MIR3653-201ENST00000625572 PABPN1Q86U42 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
MIR3653-201ENST00000625572 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
MIR3653-201ENST00000625572 ZCCHC6Q5VYS8 1495 aaKnown RBP8.85□□□□□ -0.99
MIR3653-201ENST00000625572 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
MIR3653-201ENST00000625572 SHROOM4Q9ULL8 1493 aa8.77□□□□□ -1.01
MIR3653-201ENST00000625572 UNC13AQ9UPW8 1703 aa8.65□□□□□ -1.03
MIR3653-201ENST00000625572 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
MIR3653-201ENST00000625572 SCRIBQ14160 1630 aa8.63□□□□□ -1.03
MIR3653-201ENST00000625572 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
MIR3653-201ENST00000625572 CC2D2AQ9P2K1 1620 aa8.58□□□□□ -1.04
MIR3653-201ENST00000625572 NCAPD3P42695 1498 aa8.42□□□□□ -1.06
MIR3653-201ENST00000625572 ATAD2BQ9ULI0 1458 aa8.37□□□□□ -1.07
MIR3653-201ENST00000625572 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
MIR3653-201ENST00000625572 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
MIR3653-201ENST00000625572 HMGXB3Q12766 1538 aa8.28□□□□□ -1.08
MIR3653-201ENST00000625572 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
MIR3653-201ENST00000625572 CUX2O14529 1486 aa8.26□□□□□ -1.09
MIR3653-201ENST00000625572 SMARCA4P51532 1647 aa8.26□□□□□ -1.09
MIR3653-201ENST00000625572 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
MIR3653-201ENST00000625572 BAZ1BQ9UIG0 1483 aaKnown RBP8.25□□□□□ -1.09
MIR3653-201ENST00000625572 PEG3Q9GZU2 1588 aa8.23□□□□□ -1.09
MIR3653-201ENST00000625572 MROH2BQ7Z745 1585 aa8.22□□□□□ -1.09
MIR3653-201ENST00000625572 NESP48681 1621 aa8.2□□□□□ -1.1
MIR3653-201ENST00000625572 CADPSQ9ULU8 1353 aa8.18□□□□□ -1.1
MIR3653-201ENST00000625572 PDS5BQ9NTI5 1447 aa8.17□□□□□ -1.1
MIR3653-201ENST00000625572 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
MIR3653-201ENST00000625572 RSF1Q96T23 1441 aaPredicted RBP8.12□□□□□ -1.11
MIR3653-201ENST00000625572 CFTRP13569 1480 aa8.06□□□□□ -1.12
MIR3653-201ENST00000625572 MRC2Q9UBG0 1479 aa8.06□□□□□ -1.12
MIR3653-201ENST00000625572 THOC2Q8NI27 1593 aaKnown RBP8.05□□□□□ -1.12
MIR3653-201ENST00000625572 WIZO95785 1651 aa8.02□□□□□ -1.13
MIR3653-201ENST00000625572 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.13
MIR3653-201ENST00000625572 CEP164Q9UPV0 1460 aa8.01□□□□□ -1.13
MIR3653-201ENST00000625572 WDR62O43379 1518 aa8.01□□□□□ -1.13
MIR3653-201ENST00000625572 TOP2AP11388 1531 aaKnown RBP8.01□□□□□ -1.13
MIR3653-201ENST00000625572 CCDC88BA6NC98 1476 aa7.95□□□□□ -1.14
MIR3653-201ENST00000625572 OSCARQ8IYS5 282 aa7.95□□□□□ -1.14
MIR3653-201ENST00000625572 KIF21AQ7Z4S6 1674 aa7.95□□□□□ -1.14
MIR3653-201ENST00000625572 URB2Q14146 1524 aaKnown RBP7.94□□□□□ -1.14
MIR3653-201ENST00000625572 IFT140Q96RY7 1462 aa7.89□□□□□ -1.15
MIR3653-201ENST00000625572 TRIM41Q8WV44 630 aa7.89□□□□□ -1.15
MIR3653-201ENST00000625572 ABCC8Q09428 1581 aa7.88□□□□□ -1.15
MIR3653-201ENST00000625572 TOPBP1Q92547 1522 aa7.86□□□□□ -1.15
MIR3653-201ENST00000625572 ZNF608Q9ULD9 1512 aaPredicted RBP7.84□□□□□ -1.15
MIR3653-201ENST00000625572 AQRO60306 1485 aaKnown RBP eCLIP7.8□□□□□ -1.16
MIR3653-201ENST00000625572 DNMBPQ6XZF7 1577 aa7.8□□□□□ -1.16
MIR3653-201ENST00000625572 SOGA1O94964 1423 aa7.79□□□□□ -1.16
MIR3653-201ENST00000625572 POLA1P09884 1462 aaPredicted RBP7.79□□□□□ -1.16
MIR3653-201ENST00000625572 TDRD9Q8NDG6 1382 aaKnown RBP7.78□□□□□ -1.16
MIR3653-201ENST00000625572 RAD54L2Q9Y4B4 1467 aa7.76□□□□□ -1.17
MIR3653-201ENST00000625572 FBLN2P98095 1184 aa7.76□□□□□ -1.17
MIR3653-201ENST00000625572 SUPT5HO00267 1087 aaKnown RBP7.75□□□□□ -1.17
MIR3653-201ENST00000625572 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
MIR3653-201ENST00000625572 TARBP1Q13395 1621 aaKnown RBP7.74□□□□□ -1.17
MIR3653-201ENST00000625572 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
MIR3653-201ENST00000625572 FGD5Q6ZNL6 1462 aa7.73□□□□□ -1.17
MIR3653-201ENST00000625572 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
MIR3653-201ENST00000625572 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.17
MIR3653-201ENST00000625572 GRIN2BQ13224 1484 aa7.71□□□□□ -1.18
MIR3653-201ENST00000625572 CUX1P39880 1505 aa7.71□□□□□ -1.18
MIR3653-201ENST00000625572 SNAPC4Q5SXM2 1469 aa7.69□□□□□ -1.18
MIR3653-201ENST00000625572 MAGI1Q96QZ7 1491 aaPredicted RBP7.69□□□□□ -1.18
MIR3653-201ENST00000625572 PRDM2Q13029 1718 aa7.69□□□□□ -1.18
MIR3653-201ENST00000625572 WDR97A6NE52 1622 aa7.68□□□□□ -1.18
MIR3653-201ENST00000625572 RIMBP3CA6NJZ7 1639 aa7.68□□□□□ -1.18
MIR3653-201ENST00000625572 RIMBP3BA6NNM3 1639 aa7.68□□□□□ -1.18
MIR3653-201ENST00000625572 RIMBP3Q9UFD9 1639 aa7.68□□□□□ -1.18
MIR3653-201ENST00000625572 WRNQ14191 1432 aaPredicted RBP eCLIP7.67□□□□□ -1.18
MIR3653-201ENST00000625572 SYNJ2O15056 1496 aa7.67□□□□□ -1.18
MIR3653-201ENST00000625572 GAPVD1Q14C86 1478 aa7.67□□□□□ -1.18
MIR3653-201ENST00000625572 ABCA10Q8WWZ4 1543 aa7.67□□□□□ -1.18
MIR3653-201ENST00000625572 ARAP1Q96P48 1450 aa7.66□□□□□ -1.18
MIR3653-201ENST00000625572 TRHP20396 242 aaPredicted RBP7.63□□□□□ -1.19
MIR3653-201ENST00000625572 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
MIR3653-201ENST00000625572 SYNJ1O43426 1573 aa7.61□□□□□ -1.19
MIR3653-201ENST00000625572 FHAD1B1AJZ9 1412 aa7.61□□□□□ -1.19
MIR3653-201ENST00000625572 NUP160Q12769 1436 aa7.6□□□□□ -1.19
MIR3653-201ENST00000625572 GRIN2AQ12879 1464 aa7.59□□□□□ -1.19
MIR3653-201ENST00000625572 ABCA5Q8WWZ7 1642 aa7.57□□□□□ -1.2
MIR3653-201ENST00000625572 TOP2BQ02880 1626 aa7.56□□□□□ -1.2
MIR3653-201ENST00000625572 CHD1O14646 1710 aa7.56□□□□□ -1.2
MIR3653-201ENST00000625572 JPH4Q96JJ6 628 aa7.56□□□□□ -1.2
MIR3653-201ENST00000625572 ERICH3Q5RHP9 1530 aa7.55□□□□□ -1.2
MIR3653-201ENST00000625572 IGF1RP08069 1367 aa7.54□□□□□ -1.2
MIR3653-201ENST00000625572 ADAMTS12P58397 1594 aa7.52□□□□□ -1.21
MIR3653-201ENST00000625572 BIVM-ERCC5R4GMW8 1640 aa7.52□□□□□ -1.21
MIR3653-201ENST00000625572 PRG4Q92954 1404 aaPredicted RBP7.52□□□□□ -1.21
MIR3653-201ENST00000625572 KIF27Q86VH2 1401 aa7.51□□□□□ -1.21
MIR3653-201ENST00000625572 CEP170Q5SW79 1584 aa7.5□□□□□ -1.21
MIR3653-201ENST00000625572 ERCC6L2Q5T890 1561 aa7.49□□□□□ -1.21
MIR3653-201ENST00000625572 PBRM1Q86U86 1689 aa7.47□□□□□ -1.21
MIR3653-201ENST00000625572 KIAA0586Q9BVV6 1533 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 369 ms