RNA–Protein interactions for RNA: ENST00000622967.1

AC055717.3-201, humanhuman

BASIC

Gene AC055717.3, Length 595 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.3-201ENST00000622967 NISCHQ9Y2I1 1504 aa42.67■■■■■ 4.42
AC055717.3-201ENST00000622967 ABCC9O60706 1549 aa38.75■■■■□ 3.79
AC055717.3-201ENST00000622967 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
AC055717.3-201ENST00000622967 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
AC055717.3-201ENST00000622967 RB1CC1Q8TDY2 1594 aa36.62■■■■□ 3.45
AC055717.3-201ENST00000622967 NACADO15069 1562 aa36.31■■■■□ 3.4
AC055717.3-201ENST00000622967 DCAF8L2P0C7V8 631 aa36.26■■■■□ 3.4
AC055717.3-201ENST00000622967 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
AC055717.3-201ENST00000622967 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
AC055717.3-201ENST00000622967 BICRAQ9NZM4 1560 aa35.72■■■■□ 3.31
AC055717.3-201ENST00000622967 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
AC055717.3-201ENST00000622967 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
AC055717.3-201ENST00000622967 DCAF1Q9Y4B6 1507 aa35.14■■■■□ 3.22
AC055717.3-201ENST00000622967 SCRIBQ14160 1630 aa35■■■■□ 3.19
AC055717.3-201ENST00000622967 CC2D2AQ9P2K1 1620 aa34.96■■■■□ 3.19
AC055717.3-201ENST00000622967 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
AC055717.3-201ENST00000622967 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
AC055717.3-201ENST00000622967 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
AC055717.3-201ENST00000622967 DNAJC5Q9H3Z4 198 aa33.85■■■■□ 3.01
AC055717.3-201ENST00000622967 NCAPD3P42695 1498 aa33.59■■■□□ 2.97
AC055717.3-201ENST00000622967 ATAD2BQ9ULI0 1458 aa33.47■■■□□ 2.95
AC055717.3-201ENST00000622967 CUX2O14529 1486 aa33.38■■■□□ 2.93
AC055717.3-201ENST00000622967 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
AC055717.3-201ENST00000622967 SMARCA4P51532 1647 aa33.33■■■□□ 2.93
AC055717.3-201ENST00000622967 NESP48681 1621 aa33.26■■■□□ 2.91
AC055717.3-201ENST00000622967 SMARCA2P51531 1590 aa33.26■■■□□ 2.91
AC055717.3-201ENST00000622967 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
AC055717.3-201ENST00000622967 BAZ1BQ9UIG0 1483 aaKnown RBP33.07■■■□□ 2.88
AC055717.3-201ENST00000622967 BAZ1AQ9NRL2 1556 aaPredicted RBP33.07■■■□□ 2.88
AC055717.3-201ENST00000622967 PEG3Q9GZU2 1588 aa32.97■■■□□ 2.87
AC055717.3-201ENST00000622967 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
AC055717.3-201ENST00000622967 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
AC055717.3-201ENST00000622967 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
AC055717.3-201ENST00000622967 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
AC055717.3-201ENST00000622967 PDS5BQ9NTI5 1447 aa32.64■■■□□ 2.82
AC055717.3-201ENST00000622967 CADPSQ9ULU8 1353 aa32.57■■■□□ 2.8
AC055717.3-201ENST00000622967 WIZO95785 1651 aa32.54■■■□□ 2.8
AC055717.3-201ENST00000622967 MRC2Q9UBG0 1479 aa32.4■■■□□ 2.78
AC055717.3-201ENST00000622967 WDR62O43379 1518 aa32.33■■■□□ 2.77
AC055717.3-201ENST00000622967 TRIM41Q8WV44 630 aa32.26■■■□□ 2.75
AC055717.3-201ENST00000622967 CEP164Q9UPV0 1460 aa32.19■■■□□ 2.74
AC055717.3-201ENST00000622967 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
AC055717.3-201ENST00000622967 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
AC055717.3-201ENST00000622967 CFTRP13569 1480 aa32.12■■■□□ 2.73
AC055717.3-201ENST00000622967 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
AC055717.3-201ENST00000622967 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
AC055717.3-201ENST00000622967 OSCARQ8IYS5 282 aa31.91■■■□□ 2.7
AC055717.3-201ENST00000622967 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
AC055717.3-201ENST00000622967 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
AC055717.3-201ENST00000622967 ZNF608Q9ULD9 1512 aaPredicted RBP31.67■■■□□ 2.66
AC055717.3-201ENST00000622967 IFT140Q96RY7 1462 aa31.57■■■□□ 2.64
AC055717.3-201ENST00000622967 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
AC055717.3-201ENST00000622967 RIMBP3CA6NJZ7 1639 aa31.53■■■□□ 2.64
AC055717.3-201ENST00000622967 RIMBP3BA6NNM3 1639 aa31.53■■■□□ 2.64
AC055717.3-201ENST00000622967 RIMBP3Q9UFD9 1639 aa31.53■■■□□ 2.64
AC055717.3-201ENST00000622967 ARHGEF11O15085 1522 aa31.38■■■□□ 2.61
AC055717.3-201ENST00000622967 EIF4G3O43432 1585 aaKnown RBP31.38■■■□□ 2.61
AC055717.3-201ENST00000622967 ABCC8Q09428 1581 aa31.36■■■□□ 2.61
AC055717.3-201ENST00000622967 DNMBPQ6XZF7 1577 aa31.36■■■□□ 2.61
AC055717.3-201ENST00000622967 AQRO60306 1485 aaKnown RBP eCLIP31.35■■■□□ 2.61
AC055717.3-201ENST00000622967 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
AC055717.3-201ENST00000622967 CYB5RLQ6IPT4 315 aa31.25■■■□□ 2.59
AC055717.3-201ENST00000622967 CHD1O14646 1710 aa31.24■■■□□ 2.59
AC055717.3-201ENST00000622967 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
AC055717.3-201ENST00000622967 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
AC055717.3-201ENST00000622967 FBLN2P98095 1184 aa31.18■■■□□ 2.58
AC055717.3-201ENST00000622967 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
AC055717.3-201ENST00000622967 SOGA1O94964 1423 aa31.08■■■□□ 2.57
AC055717.3-201ENST00000622967 ARAP1Q96P48 1450 aa31.08■■■□□ 2.57
AC055717.3-201ENST00000622967 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
AC055717.3-201ENST00000622967 TRHP20396 242 aaPredicted RBP30.95■■■□□ 2.55
AC055717.3-201ENST00000622967 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.54
AC055717.3-201ENST00000622967 CUX1P39880 1505 aa30.93■■■□□ 2.54
AC055717.3-201ENST00000622967 CHMP7Q8WUX9 453 aaPredicted RBP30.86■■■□□ 2.53
AC055717.3-201ENST00000622967 CLASP1Q7Z460 1538 aa30.86■■■□□ 2.53
AC055717.3-201ENST00000622967 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
AC055717.3-201ENST00000622967 GRIN2BQ13224 1484 aa30.78■■■□□ 2.52
AC055717.3-201ENST00000622967 MAGI1Q96QZ7 1491 aaPredicted RBP30.78■■■□□ 2.52
AC055717.3-201ENST00000622967 SYNJ1O43426 1573 aa30.74■■■□□ 2.51
AC055717.3-201ENST00000622967 SYNJ2O15056 1496 aa30.71■■■□□ 2.51
AC055717.3-201ENST00000622967 GAPVD1Q14C86 1478 aa30.67■■■□□ 2.5
AC055717.3-201ENST00000622967 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
AC055717.3-201ENST00000622967 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
AC055717.3-201ENST00000622967 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
AC055717.3-201ENST00000622967 ABCA5Q8WWZ7 1642 aa30.56■■■□□ 2.48
AC055717.3-201ENST00000622967 ERCC6L2Q5T890 1561 aa30.48■■■□□ 2.47
AC055717.3-201ENST00000622967 GRIN2AQ12879 1464 aa30.41■■■□□ 2.46
AC055717.3-201ENST00000622967 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.45
AC055717.3-201ENST00000622967 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
AC055717.3-201ENST00000622967 ADAMTS12P58397 1594 aa30.33■■■□□ 2.45
AC055717.3-201ENST00000622967 NUP160Q12769 1436 aa30.32■■■□□ 2.44
AC055717.3-201ENST00000622967 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
AC055717.3-201ENST00000622967 BIVM-ERCC5R4GMW8 1640 aa30.3■■■□□ 2.44
AC055717.3-201ENST00000622967 FHAD1B1AJZ9 1412 aa30.24■■■□□ 2.43
AC055717.3-201ENST00000622967 SHROOM2Q13796 1616 aa30.22■■■□□ 2.43
AC055717.3-201ENST00000622967 AEBP2Q6ZN18 517 aaPredicted RBP30.19■■■□□ 2.42
AC055717.3-201ENST00000622967 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
AC055717.3-201ENST00000622967 PRG4Q92954 1404 aaPredicted RBP30.09■■■□□ 2.41
AC055717.3-201ENST00000622967 JPH4Q96JJ6 628 aa30.08■■■□□ 2.41
AC055717.3-201ENST00000622967 KIF13AQ9H1H9 1805 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms