RNA–Protein interactions for RNA: ENST00000622308.4

SPPL2B-214, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best)

Gene SPPL2B, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-214ENST00000622308 NISCHQ9Y2I1 1504 aa43.52■■■■■ 4.56
SPPL2B-214ENST00000622308 ABCC9O60706 1549 aa39.4■■■■□ 3.9
SPPL2B-214ENST00000622308 CCDC180Q9P1Z9 1646 aa39.02■■■■□ 3.84
SPPL2B-214ENST00000622308 DNAJC5BQ9UF47 199 aa37.31■■■■□ 3.56
SPPL2B-214ENST00000622308 RB1CC1Q8TDY2 1594 aa37.3■■■■□ 3.56
SPPL2B-214ENST00000622308 NACADO15069 1562 aa37.02■■■■□ 3.52
SPPL2B-214ENST00000622308 DCAF8L2P0C7V8 631 aa36.83■■■■□ 3.49
SPPL2B-214ENST00000622308 PABPN1Q86U42 306 aaKnown RBP eCLIP36.7■■■■□ 3.47
SPPL2B-214ENST00000622308 MYO15BQ96JP2 1530 aa36.48■■■■□ 3.43
SPPL2B-214ENST00000622308 UNC13AQ9UPW8 1703 aa36.38■■■■□ 3.41
SPPL2B-214ENST00000622308 BICRAQ9NZM4 1560 aa36.32■■■■□ 3.4
SPPL2B-214ENST00000622308 ZCCHC6Q5VYS8 1495 aaKnown RBP36.01■■■■□ 3.36
SPPL2B-214ENST00000622308 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
SPPL2B-214ENST00000622308 SHROOM4Q9ULL8 1493 aa35.74■■■■□ 3.31
SPPL2B-214ENST00000622308 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
SPPL2B-214ENST00000622308 CC2D2AQ9P2K1 1620 aa35.53■■■■□ 3.28
SPPL2B-214ENST00000622308 CECR2Q9BXF3 1484 aa35.51■■■■□ 3.28
SPPL2B-214ENST00000622308 EIF4G1Q04637 1599 aaKnown RBP35.41■■■■□ 3.26
SPPL2B-214ENST00000622308 DNAJC5Q9H3Z4 198 aa34.37■■■■□ 3.09
SPPL2B-214ENST00000622308 NCAPD3P42695 1498 aa34.27■■■■□ 3.08
SPPL2B-214ENST00000622308 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
SPPL2B-214ENST00000622308 CUX2O14529 1486 aa34.01■■■■□ 3.04
SPPL2B-214ENST00000622308 ERCC6Q03468 1493 aa33.97■■■■□ 3.03
SPPL2B-214ENST00000622308 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
SPPL2B-214ENST00000622308 SMARCA2P51531 1590 aa33.92■■■■□ 3.02
SPPL2B-214ENST00000622308 HMGXB3Q12766 1538 aa33.91■■■■□ 3.02
SPPL2B-214ENST00000622308 NESP48681 1621 aa33.79■■■■□ 3
SPPL2B-214ENST00000622308 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
SPPL2B-214ENST00000622308 BAZ1BQ9UIG0 1483 aaKnown RBP33.71■■■□□ 2.99
SPPL2B-214ENST00000622308 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
SPPL2B-214ENST00000622308 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
SPPL2B-214ENST00000622308 THOC2Q8NI27 1593 aaKnown RBP33.43■■■□□ 2.94
SPPL2B-214ENST00000622308 LAMC3Q9Y6N6 1575 aa33.43■■■□□ 2.94
SPPL2B-214ENST00000622308 PDS5BQ9NTI5 1447 aa33.29■■■□□ 2.92
SPPL2B-214ENST00000622308 KIF21AQ7Z4S6 1674 aa33.21■■■□□ 2.91
SPPL2B-214ENST00000622308 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
SPPL2B-214ENST00000622308 WIZO95785 1651 aa33.05■■■□□ 2.88
SPPL2B-214ENST00000622308 MRC2Q9UBG0 1479 aa33.02■■■□□ 2.88
SPPL2B-214ENST00000622308 WDR62O43379 1518 aa32.94■■■□□ 2.86
SPPL2B-214ENST00000622308 CEP164Q9UPV0 1460 aa32.81■■■□□ 2.84
SPPL2B-214ENST00000622308 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
SPPL2B-214ENST00000622308 RSF1Q96T23 1441 aaPredicted RBP32.79■■■□□ 2.84
SPPL2B-214ENST00000622308 CFTRP13569 1480 aa32.78■■■□□ 2.84
SPPL2B-214ENST00000622308 TRIM41Q8WV44 630 aa32.71■■■□□ 2.83
SPPL2B-214ENST00000622308 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
SPPL2B-214ENST00000622308 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
SPPL2B-214ENST00000622308 OSCARQ8IYS5 282 aa32.47■■■□□ 2.79
SPPL2B-214ENST00000622308 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
SPPL2B-214ENST00000622308 ZNF608Q9ULD9 1512 aaPredicted RBP32.22■■■□□ 2.75
SPPL2B-214ENST00000622308 IFT140Q96RY7 1462 aa32.2■■■□□ 2.75
SPPL2B-214ENST00000622308 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
SPPL2B-214ENST00000622308 TOPBP1Q92547 1522 aa32.15■■■□□ 2.74
SPPL2B-214ENST00000622308 ABCC8Q09428 1581 aa32.01■■■□□ 2.71
SPPL2B-214ENST00000622308 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
SPPL2B-214ENST00000622308 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
SPPL2B-214ENST00000622308 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
SPPL2B-214ENST00000622308 DNMBPQ6XZF7 1577 aa31.96■■■□□ 2.71
SPPL2B-214ENST00000622308 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
SPPL2B-214ENST00000622308 ARHGEF11O15085 1522 aa31.92■■■□□ 2.7
SPPL2B-214ENST00000622308 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.73e-7■■■■■ 62.3
SPPL2B-214ENST00000622308 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
SPPL2B-214ENST00000622308 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.68
SPPL2B-214ENST00000622308 CYB5RLQ6IPT4 315 aa31.74■■■□□ 2.67
SPPL2B-214ENST00000622308 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
SPPL2B-214ENST00000622308 FBLN2P98095 1184 aa31.69■■■□□ 2.66
SPPL2B-214ENST00000622308 CHD1O14646 1710 aa31.67■■■□□ 2.66
SPPL2B-214ENST00000622308 TDRD9Q8NDG6 1382 aaKnown RBP31.67■■■□□ 2.66
SPPL2B-214ENST00000622308 SOGA1O94964 1423 aa31.66■■■□□ 2.66
SPPL2B-214ENST00000622308 ARAP1Q96P48 1450 aa31.62■■■□□ 2.65
SPPL2B-214ENST00000622308 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.64
SPPL2B-214ENST00000622308 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
SPPL2B-214ENST00000622308 CUX1P39880 1505 aa31.52■■■□□ 2.64
SPPL2B-214ENST00000622308 WDR97A6NE52 1622 aa31.45■■■□□ 2.62
SPPL2B-214ENST00000622308 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
SPPL2B-214ENST00000622308 TRHP20396 242 aaPredicted RBP31.42■■■□□ 2.62
SPPL2B-214ENST00000622308 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
SPPL2B-214ENST00000622308 MAGI1Q96QZ7 1491 aaPredicted RBP31.41■■■□□ 2.62
SPPL2B-214ENST00000622308 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
SPPL2B-214ENST00000622308 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
SPPL2B-214ENST00000622308 SYNJ1O43426 1573 aa31.31■■■□□ 2.6
SPPL2B-214ENST00000622308 GAPVD1Q14C86 1478 aa31.26■■■□□ 2.59
SPPL2B-214ENST00000622308 ABCA10Q8WWZ4 1543 aa31.2■■■□□ 2.59
SPPL2B-214ENST00000622308 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
SPPL2B-214ENST00000622308 PBRM1Q86U86 1689 aa31.13■■■□□ 2.57
SPPL2B-214ENST00000622308 SUPT5HO00267 1087 aaKnown RBP31.12■■■□□ 2.57
SPPL2B-214ENST00000622308 WRNQ14191 1432 aaPredicted RBP eCLIP31.02■■■□□ 2.565e-6■■□□□ 12.5
SPPL2B-214ENST00000622308 GRIN2AQ12879 1464 aa31■■■□□ 2.55
SPPL2B-214ENST00000622308 ERCC6L2Q5T890 1561 aa30.95■■■□□ 2.54
SPPL2B-214ENST00000622308 NUP160Q12769 1436 aa30.94■■■□□ 2.54
SPPL2B-214ENST00000622308 ADAMTS12P58397 1594 aa30.91■■■□□ 2.54
SPPL2B-214ENST00000622308 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
SPPL2B-214ENST00000622308 TOP2BQ02880 1626 aa30.89■■■□□ 2.54
SPPL2B-214ENST00000622308 FHAD1B1AJZ9 1412 aa30.86■■■□□ 2.53
SPPL2B-214ENST00000622308 BIVM-ERCC5R4GMW8 1640 aa30.86■■■□□ 2.53
SPPL2B-214ENST00000622308 ERICH3Q5RHP9 1530 aa30.77■■■□□ 2.52
SPPL2B-214ENST00000622308 SHROOM2Q13796 1616 aa30.76■■■□□ 2.51
SPPL2B-214ENST00000622308 PRG4Q92954 1404 aaPredicted RBP30.64■■■□□ 2.5
SPPL2B-214ENST00000622308 JPH4Q96JJ6 628 aa30.64■■■□□ 2.5
SPPL2B-214ENST00000622308 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
SPPL2B-214ENST00000622308 RUSC2Q8N2Y8 1516 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms