RNA–Protein interactions for RNA: ENST00000621462.4

BCRP3-202, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 3 BASIC

Gene BCRP3, Length 1,021 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-202ENST00000621462 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
BCRP3-202ENST00000621462 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
BCRP3-202ENST00000621462 ABCC9O60706 1549 aa34.89■■■■□ 3.18
BCRP3-202ENST00000621462 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
BCRP3-202ENST00000621462 NACADO15069 1562 aa33.14■■■□□ 2.9
BCRP3-202ENST00000621462 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
BCRP3-202ENST00000621462 MYO15BQ96JP2 1530 aa32.73■■■□□ 2.83
BCRP3-202ENST00000621462 DNAJC5BQ9UF47 199 aa32.55■■■□□ 2.8
BCRP3-202ENST00000621462 UNC13AQ9UPW8 1703 aa32.44■■■□□ 2.78
BCRP3-202ENST00000621462 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
BCRP3-202ENST00000621462 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
BCRP3-202ENST00000621462 DCAF1Q9Y4B6 1507 aa32.29■■■□□ 2.76
BCRP3-202ENST00000621462 BICRAQ9NZM4 1560 aa32.22■■■□□ 2.75
BCRP3-202ENST00000621462 SHROOM4Q9ULL8 1493 aa32.06■■■□□ 2.72
BCRP3-202ENST00000621462 SCRIBQ14160 1630 aa31.83■■■□□ 2.69
BCRP3-202ENST00000621462 CC2D2AQ9P2K1 1620 aa31.55■■■□□ 2.64
BCRP3-202ENST00000621462 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
BCRP3-202ENST00000621462 CECR2Q9BXF3 1484 aa31.49■■■□□ 2.63
BCRP3-202ENST00000621462 NCAPD3P42695 1498 aa30.55■■■□□ 2.48
BCRP3-202ENST00000621462 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
BCRP3-202ENST00000621462 ATAD2BQ9ULI0 1458 aa30.42■■■□□ 2.46
BCRP3-202ENST00000621462 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
BCRP3-202ENST00000621462 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
BCRP3-202ENST00000621462 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
BCRP3-202ENST00000621462 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
BCRP3-202ENST00000621462 CUX2O14529 1486 aa30.2■■■□□ 2.43
BCRP3-202ENST00000621462 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
BCRP3-202ENST00000621462 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
BCRP3-202ENST00000621462 DNAJC5Q9H3Z4 198 aa30.05■■■□□ 2.4
BCRP3-202ENST00000621462 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
BCRP3-202ENST00000621462 NESP48681 1621 aa29.93■■■□□ 2.38
BCRP3-202ENST00000621462 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
BCRP3-202ENST00000621462 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
BCRP3-202ENST00000621462 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
BCRP3-202ENST00000621462 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
BCRP3-202ENST00000621462 WIZO95785 1651 aa29.6■■■□□ 2.33
BCRP3-202ENST00000621462 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
BCRP3-202ENST00000621462 MRC2Q9UBG0 1479 aa29.44■■■□□ 2.3
BCRP3-202ENST00000621462 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
BCRP3-202ENST00000621462 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
BCRP3-202ENST00000621462 WDR62O43379 1518 aa29.35■■■□□ 2.29
BCRP3-202ENST00000621462 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
BCRP3-202ENST00000621462 CFTRP13569 1480 aa29.28■■■□□ 2.28
BCRP3-202ENST00000621462 FANCD2Q9BXW9 1451 aa29.28■■■□□ 2.28
BCRP3-202ENST00000621462 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
BCRP3-202ENST00000621462 URB2Q14146 1524 aaKnown RBP28.96■■■□□ 2.23
BCRP3-202ENST00000621462 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
BCRP3-202ENST00000621462 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
BCRP3-202ENST00000621462 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
BCRP3-202ENST00000621462 IFT140Q96RY7 1462 aa28.77■■■□□ 2.2
BCRP3-202ENST00000621462 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
BCRP3-202ENST00000621462 TOPBP1Q92547 1522 aa28.7■■■□□ 2.19
BCRP3-202ENST00000621462 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
BCRP3-202ENST00000621462 ZNF608Q9ULD9 1512 aaPredicted RBP28.58■■■□□ 2.17
BCRP3-202ENST00000621462 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
BCRP3-202ENST00000621462 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
BCRP3-202ENST00000621462 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
BCRP3-202ENST00000621462 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
BCRP3-202ENST00000621462 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
BCRP3-202ENST00000621462 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
BCRP3-202ENST00000621462 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
BCRP3-202ENST00000621462 SOGA1O94964 1423 aa28.31■■■□□ 2.12
BCRP3-202ENST00000621462 WDR97A6NE52 1622 aa28.31■■■□□ 2.12
BCRP3-202ENST00000621462 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
BCRP3-202ENST00000621462 CHD1O14646 1710 aa28.25■■■□□ 2.11
BCRP3-202ENST00000621462 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
BCRP3-202ENST00000621462 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
BCRP3-202ENST00000621462 FBLN2P98095 1184 aa28.23■■■□□ 2.11
BCRP3-202ENST00000621462 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
BCRP3-202ENST00000621462 CUX1P39880 1505 aa28.17■■■□□ 2.1
BCRP3-202ENST00000621462 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
BCRP3-202ENST00000621462 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
BCRP3-202ENST00000621462 GRIN2BQ13224 1484 aa28.1■■■□□ 2.09
BCRP3-202ENST00000621462 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
BCRP3-202ENST00000621462 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
BCRP3-202ENST00000621462 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
BCRP3-202ENST00000621462 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
BCRP3-202ENST00000621462 SYNJ2O15056 1496 aa28■■■□□ 2.07
BCRP3-202ENST00000621462 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
BCRP3-202ENST00000621462 ARAP1Q96P48 1450 aa27.96■■■□□ 2.07
BCRP3-202ENST00000621462 ABCA10Q8WWZ4 1543 aa27.96■■■□□ 2.07
BCRP3-202ENST00000621462 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
BCRP3-202ENST00000621462 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
BCRP3-202ENST00000621462 WRNQ14191 1432 aaPredicted RBP eCLIP27.91■■■□□ 2.06
BCRP3-202ENST00000621462 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.05
BCRP3-202ENST00000621462 TRHP20396 242 aaPredicted RBP27.8■■■□□ 2.04
BCRP3-202ENST00000621462 TOP2BQ02880 1626 aa27.8■■■□□ 2.04
BCRP3-202ENST00000621462 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
BCRP3-202ENST00000621462 GRIN2AQ12879 1464 aa27.7■■■□□ 2.03
BCRP3-202ENST00000621462 ADAMTS12P58397 1594 aa27.68■■■□□ 2.02
BCRP3-202ENST00000621462 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
BCRP3-202ENST00000621462 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
BCRP3-202ENST00000621462 NUP160Q12769 1436 aa27.59■■■□□ 2.01
BCRP3-202ENST00000621462 CEP170Q5SW79 1584 aa27.54■■■□□ 2
BCRP3-202ENST00000621462 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
BCRP3-202ENST00000621462 ERCC6L2Q5T890 1561 aa27.4■■□□□ 1.98
BCRP3-202ENST00000621462 PRG4Q92954 1404 aaPredicted RBP27.33■■□□□ 1.97
BCRP3-202ENST00000621462 JPH4Q96JJ6 628 aa27.32■■□□□ 1.96
BCRP3-202ENST00000621462 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
BCRP3-202ENST00000621462 RUSC2Q8N2Y8 1516 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms