RNA–Protein interactions for RNA: ENST00000621096.4

EHD1-213, Transcript of EH domain containing 1, humanhuman

TSL 5 BASIC

Gene EHD1, Length 3,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EHD1-213ENST00000621096 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
EHD1-213ENST00000621096 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
EHD1-213ENST00000621096 DCAF8L2P0C7V8 631 aa21.41■■□□□ 1.02
EHD1-213ENST00000621096 ABCC9O60706 1549 aa21.3■■□□□ 1
EHD1-213ENST00000621096 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
EHD1-213ENST00000621096 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
EHD1-213ENST00000621096 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
EHD1-213ENST00000621096 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
EHD1-213ENST00000621096 HRCP23327 699 aa20.96■□□□□ 0.95
EHD1-213ENST00000621096 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
EHD1-213ENST00000621096 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
EHD1-213ENST00000621096 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
EHD1-213ENST00000621096 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
EHD1-213ENST00000621096 NACADO15069 1562 aa20.6■□□□□ 0.89
EHD1-213ENST00000621096 MYT1Q01538 1121 aa20.53■□□□□ 0.88
EHD1-213ENST00000621096 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
EHD1-213ENST00000621096 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
EHD1-213ENST00000621096 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
EHD1-213ENST00000621096 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
EHD1-213ENST00000621096 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
EHD1-213ENST00000621096 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
EHD1-213ENST00000621096 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
EHD1-213ENST00000621096 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
EHD1-213ENST00000621096 ZEB1P37275 1124 aaPredicted RBP19.85■□□□□ 0.77
EHD1-213ENST00000621096 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
EHD1-213ENST00000621096 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
EHD1-213ENST00000621096 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
EHD1-213ENST00000621096 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
EHD1-213ENST00000621096 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
EHD1-213ENST00000621096 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
EHD1-213ENST00000621096 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
EHD1-213ENST00000621096 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
EHD1-213ENST00000621096 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
EHD1-213ENST00000621096 WIZO95785 1651 aa19.35■□□□□ 0.69
EHD1-213ENST00000621096 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
EHD1-213ENST00000621096 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
EHD1-213ENST00000621096 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
EHD1-213ENST00000621096 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
EHD1-213ENST00000621096 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
EHD1-213ENST00000621096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
EHD1-213ENST00000621096 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
EHD1-213ENST00000621096 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
EHD1-213ENST00000621096 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
EHD1-213ENST00000621096 CC2D2AQ9P2K1 1620 aa19.13■□□□□ 0.65
EHD1-213ENST00000621096 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
EHD1-213ENST00000621096 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
EHD1-213ENST00000621096 PRKCSHP14314 528 aaPredicted RBP19.1■□□□□ 0.65
EHD1-213ENST00000621096 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
EHD1-213ENST00000621096 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
EHD1-213ENST00000621096 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
EHD1-213ENST00000621096 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
EHD1-213ENST00000621096 NCAPD3P42695 1498 aa19.06■□□□□ 0.64
EHD1-213ENST00000621096 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
EHD1-213ENST00000621096 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
EHD1-213ENST00000621096 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
EHD1-213ENST00000621096 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
EHD1-213ENST00000621096 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
EHD1-213ENST00000621096 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
EHD1-213ENST00000621096 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
EHD1-213ENST00000621096 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
EHD1-213ENST00000621096 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
EHD1-213ENST00000621096 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
EHD1-213ENST00000621096 MIER1Q8N108 512 aa18.61■□□□□ 0.57
EHD1-213ENST00000621096 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
EHD1-213ENST00000621096 CFTRP13569 1480 aa18.58■□□□□ 0.57
EHD1-213ENST00000621096 NESP48681 1621 aa18.58■□□□□ 0.56
EHD1-213ENST00000621096 SOGA1O94964 1423 aa18.54■□□□□ 0.56
EHD1-213ENST00000621096 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.56
EHD1-213ENST00000621096 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
EHD1-213ENST00000621096 EEA1Q15075 1411 aa18.47■□□□□ 0.55
EHD1-213ENST00000621096 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
EHD1-213ENST00000621096 APLP2Q06481 763 aa18.44■□□□□ 0.54
EHD1-213ENST00000621096 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
EHD1-213ENST00000621096 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
EHD1-213ENST00000621096 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
EHD1-213ENST00000621096 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
EHD1-213ENST00000621096 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
EHD1-213ENST00000621096 ANP32EQ9BTT0 268 aa18.36■□□□□ 0.53
EHD1-213ENST00000621096 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
EHD1-213ENST00000621096 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
EHD1-213ENST00000621096 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
EHD1-213ENST00000621096 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
EHD1-213ENST00000621096 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
EHD1-213ENST00000621096 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
EHD1-213ENST00000621096 CUX1P39880 1505 aa18.25■□□□□ 0.51
EHD1-213ENST00000621096 CLIP1P30622 1438 aa18.24■□□□□ 0.51
EHD1-213ENST00000621096 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
EHD1-213ENST00000621096 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
EHD1-213ENST00000621096 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
EHD1-213ENST00000621096 KIF21BO75037 1637 aa18.18■□□□□ 0.5
EHD1-213ENST00000621096 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
EHD1-213ENST00000621096 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
EHD1-213ENST00000621096 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
EHD1-213ENST00000621096 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
EHD1-213ENST00000621096 BIVM-ERCC5R4GMW8 1640 aa18.12■□□□□ 0.49
EHD1-213ENST00000621096 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
EHD1-213ENST00000621096 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
EHD1-213ENST00000621096 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
EHD1-213ENST00000621096 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
EHD1-213ENST00000621096 POLA1P09884 1462 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms