RNA–Protein interactions for RNA: ENST00000621052.1

LINC01297-204, Transcript of long intergenic non-protein coding RNA 1297, humanhuman

TSL 5 BASIC

Gene LINC01297, Length 4,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01297-204ENST00000621052 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
LINC01297-204ENST00000621052 DCAF8L2P0C7V8 631 aa11.73□□□□□ -0.53
LINC01297-204ENST00000621052 CCDC180Q9P1Z9 1646 aa11.7□□□□□ -0.54
LINC01297-204ENST00000621052 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
LINC01297-204ENST00000621052 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.61
LINC01297-204ENST00000621052 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
LINC01297-204ENST00000621052 ZCCHC6Q5VYS8 1495 aaKnown RBP11.03□□□□□ -0.64
LINC01297-204ENST00000621052 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
LINC01297-204ENST00000621052 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
LINC01297-204ENST00000621052 NACADO15069 1562 aa10.76□□□□□ -0.69
LINC01297-204ENST00000621052 RB1CC1Q8TDY2 1594 aa10.62□□□□□ -0.71
LINC01297-204ENST00000621052 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
LINC01297-204ENST00000621052 ABCC9O60706 1549 aa10.6□□□□□ -0.71
LINC01297-204ENST00000621052 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
LINC01297-204ENST00000621052 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
LINC01297-204ENST00000621052 CHIC1Q5VXU3 224 aa10.49□□□□□ -0.73
LINC01297-204ENST00000621052 MYT1Q01538 1121 aa10.48□□□□□ -0.73
LINC01297-204ENST00000621052 BICRAQ9NZM4 1560 aa10.4□□□□□ -0.74
LINC01297-204ENST00000621052 LOC105371045A0A1W2PR82 267 aa10.4□□□□□ -0.75
LINC01297-204ENST00000621052 SCRIBQ14160 1630 aa10.37□□□□□ -0.75
LINC01297-204ENST00000621052 PCGF6Q9BYE7 350 aa10.36□□□□□ -0.75
LINC01297-204ENST00000621052 TTBK1Q5TCY1 1321 aaPredicted RBP10.33□□□□□ -0.76
LINC01297-204ENST00000621052 PABPN1Q86U42 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC01297-204ENST00000621052 PPARGC1BQ86YN6 1023 aaKnown RBP10.29□□□□□ -0.76
LINC01297-204ENST00000621052 TRIM41Q8WV44 630 aa10.26□□□□□ -0.77
LINC01297-204ENST00000621052 RANGAP1P46060 587 aaPredicted RBP10.25□□□□□ -0.77
LINC01297-204ENST00000621052 HRCP23327 699 aa10.2□□□□□ -0.78
LINC01297-204ENST00000621052 PEG3Q9GZU2 1588 aa10.17□□□□□ -0.78
LINC01297-204ENST00000621052 SMARCA4P51532 1647 aa10.11□□□□□ -0.79
LINC01297-204ENST00000621052 BAZ1AQ9NRL2 1556 aaPredicted RBP10.1□□□□□ -0.79
LINC01297-204ENST00000621052 RSF1Q96T23 1441 aaPredicted RBP10.02□□□□□ -0.8
LINC01297-204ENST00000621052 MROH2BQ7Z745 1585 aa10.02□□□□□ -0.81
LINC01297-204ENST00000621052 CECR2Q9BXF3 1484 aa10.02□□□□□ -0.81
LINC01297-204ENST00000621052 UBTFP17480 764 aaKnown RBP10.02□□□□□ -0.81
LINC01297-204ENST00000621052 APLP2Q06481 763 aa10.02□□□□□ -0.81
LINC01297-204ENST00000621052 EIF4G1Q04637 1599 aaKnown RBP9.98□□□□□ -0.81
LINC01297-204ENST00000621052 WIZO95785 1651 aa9.96□□□□□ -0.81
LINC01297-204ENST00000621052 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
LINC01297-204ENST00000621052 ERICH6Q7L0X2 663 aa9.96□□□□□ -0.82
LINC01297-204ENST00000621052 HMGXB3Q12766 1538 aa9.95□□□□□ -0.82
LINC01297-204ENST00000621052 TOP2AP11388 1531 aaKnown RBP9.93□□□□□ -0.82
LINC01297-204ENST00000621052 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
LINC01297-204ENST00000621052 CENPBP07199 599 aaPredicted RBP9.91□□□□□ -0.82
LINC01297-204ENST00000621052 ATP1B4Q9UN42 357 aaPredicted RBP9.9□□□□□ -0.82
LINC01297-204ENST00000621052 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
LINC01297-204ENST00000621052 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
LINC01297-204ENST00000621052 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
LINC01297-204ENST00000621052 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
LINC01297-204ENST00000621052 CC2D2AQ9P2K1 1620 aa9.83□□□□□ -0.84
LINC01297-204ENST00000621052 CCER1Q8TC90 406 aaPredicted RBP9.77□□□□□ -0.84
LINC01297-204ENST00000621052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
LINC01297-204ENST00000621052 ITGAEP38570 1179 aa9.73□□□□□ -0.85
LINC01297-204ENST00000621052 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
LINC01297-204ENST00000621052 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
LINC01297-204ENST00000621052 CCDC88BA6NC98 1476 aa9.69□□□□□ -0.86
LINC01297-204ENST00000621052 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
LINC01297-204ENST00000621052 YTHDC1Q96MU7 727 aaKnown RBP9.65□□□□□ -0.86
LINC01297-204ENST00000621052 SOGA1O94964 1423 aa9.63□□□□□ -0.87
LINC01297-204ENST00000621052 RUSC2Q8N2Y8 1516 aa9.63□□□□□ -0.87
LINC01297-204ENST00000621052 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
LINC01297-204ENST00000621052 CFTRP13569 1480 aa9.6□□□□□ -0.87
LINC01297-204ENST00000621052 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
LINC01297-204ENST00000621052 LAMC3Q9Y6N6 1575 aa9.59□□□□□ -0.87
LINC01297-204ENST00000621052 DNAJC5BQ9UF47 199 aa9.58□□□□□ -0.88
LINC01297-204ENST00000621052 BIVM-ERCC5R4GMW8 1640 aa9.58□□□□□ -0.88
LINC01297-204ENST00000621052 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
LINC01297-204ENST00000621052 SCAF1Q9H7N4 1312 aaKnown RBP9.56□□□□□ -0.88
LINC01297-204ENST00000621052 FBLN2P98095 1184 aa9.5□□□□□ -0.89
LINC01297-204ENST00000621052 TOP2BQ02880 1626 aa9.5□□□□□ -0.89
LINC01297-204ENST00000621052 CEP162Q5TB80 1403 aa9.5□□□□□ -0.89
LINC01297-204ENST00000621052 NEFLP07196 543 aa9.49□□□□□ -0.89
LINC01297-204ENST00000621052 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
LINC01297-204ENST00000621052 KIF21AQ7Z4S6 1674 aa9.47□□□□□ -0.89
LINC01297-204ENST00000621052 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.89
LINC01297-204ENST00000621052 SYNJ1O43426 1573 aa9.45□□□□□ -0.9
LINC01297-204ENST00000621052 FAM50AQ14320 339 aaKnown RBP9.45□□□□□ -0.9
LINC01297-204ENST00000621052 NEUROD1Q13562 356 aa9.45□□□□□ -0.9
LINC01297-204ENST00000621052 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
LINC01297-204ENST00000621052 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
LINC01297-204ENST00000621052 DIEXFQ68CQ4 756 aaKnown RBP9.42□□□□□ -0.9
LINC01297-204ENST00000621052 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
LINC01297-204ENST00000621052 CUX1P39880 1505 aa9.41□□□□□ -0.9
LINC01297-204ENST00000621052 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
LINC01297-204ENST00000621052 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.9
LINC01297-204ENST00000621052 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
LINC01297-204ENST00000621052 WDR62O43379 1518 aa9.38□□□□□ -0.91
LINC01297-204ENST00000621052 TNIKQ9UKE5 1360 aa9.38□□□□□ -0.91
LINC01297-204ENST00000621052 CNGB1Q14028 1251 aaPredicted RBP9.38□□□□□ -0.91
LINC01297-204ENST00000621052 NESP48681 1621 aa9.36□□□□□ -0.91
LINC01297-204ENST00000621052 FANCD2Q9BXW9 1451 aa9.36□□□□□ -0.91
LINC01297-204ENST00000621052 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
LINC01297-204ENST00000621052 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
LINC01297-204ENST00000621052 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
LINC01297-204ENST00000621052 RAPGEF2Q9Y4G8 1499 aa9.33□□□□□ -0.92
LINC01297-204ENST00000621052 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
LINC01297-204ENST00000621052 CEP164Q9UPV0 1460 aa9.31□□□□□ -0.92
LINC01297-204ENST00000621052 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
LINC01297-204ENST00000621052 ABCA5Q8WWZ7 1642 aa9.31□□□□□ -0.92
LINC01297-204ENST00000621052 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
LINC01297-204ENST00000621052 GOLGA3Q08378 1498 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms