RNA–Protein interactions for RNA: ENST00000620895.1

PMPCA-211, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 3

Gene PMPCA, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-211ENST00000620895 NISCHQ9Y2I1 1504 aa44.06■■■■■ 4.64
PMPCA-211ENST00000620895 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
PMPCA-211ENST00000620895 ABCC9O60706 1549 aa39.53■■■■□ 3.92
PMPCA-211ENST00000620895 RB1CC1Q8TDY2 1594 aa37.75■■■■□ 3.63
PMPCA-211ENST00000620895 NACADO15069 1562 aa37.48■■■■□ 3.59
PMPCA-211ENST00000620895 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
PMPCA-211ENST00000620895 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
PMPCA-211ENST00000620895 MYO15BQ96JP2 1530 aa37■■■■□ 3.51
PMPCA-211ENST00000620895 UNC13AQ9UPW8 1703 aa36.78■■■■□ 3.48
PMPCA-211ENST00000620895 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
PMPCA-211ENST00000620895 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
PMPCA-211ENST00000620895 ZCCHC6Q5VYS8 1495 aaKnown RBP36.51■■■■□ 3.44
PMPCA-211ENST00000620895 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
PMPCA-211ENST00000620895 SHROOM4Q9ULL8 1493 aa36.25■■■■□ 3.39
PMPCA-211ENST00000620895 SCRIBQ14160 1630 aa35.99■■■■□ 3.35
PMPCA-211ENST00000620895 CC2D2AQ9P2K1 1620 aa35.75■■■■□ 3.31
PMPCA-211ENST00000620895 EIF4G1Q04637 1599 aaKnown RBP35.69■■■■□ 3.3
PMPCA-211ENST00000620895 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
PMPCA-211ENST00000620895 NCAPD3P42695 1498 aa34.57■■■■□ 3.12
PMPCA-211ENST00000620895 ATAD2BQ9ULI0 1458 aa34.41■■■■□ 3.1
PMPCA-211ENST00000620895 SMARCA2P51531 1590 aa34.4■■■■□ 3.1
PMPCA-211ENST00000620895 SMARCA4P51532 1647 aa34.38■■■■□ 3.09
PMPCA-211ENST00000620895 HMGXB3Q12766 1538 aa34.35■■■■□ 3.09
PMPCA-211ENST00000620895 BAZ1AQ9NRL2 1556 aaPredicted RBP34.26■■■■□ 3.07
PMPCA-211ENST00000620895 CUX2O14529 1486 aa34.23■■■■□ 3.07
PMPCA-211ENST00000620895 ERCC6Q03468 1493 aa34.22■■■■□ 3.07
PMPCA-211ENST00000620895 DNAJC5Q9H3Z4 198 aa34.17■■■■□ 3.06
PMPCA-211ENST00000620895 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
PMPCA-211ENST00000620895 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
PMPCA-211ENST00000620895 NESP48681 1621 aa33.91■■■■□ 3.02
PMPCA-211ENST00000620895 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
PMPCA-211ENST00000620895 LAMC3Q9Y6N6 1575 aa33.84■■■■□ 3.01
PMPCA-211ENST00000620895 THOC2Q8NI27 1593 aaKnown RBP33.67■■■□□ 2.98
PMPCA-211ENST00000620895 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
PMPCA-211ENST00000620895 KIF21AQ7Z4S6 1674 aa33.54■■■□□ 2.96
PMPCA-211ENST00000620895 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
PMPCA-211ENST00000620895 WIZO95785 1651 aa33.47■■■□□ 2.95
PMPCA-211ENST00000620895 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
PMPCA-211ENST00000620895 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
PMPCA-211ENST00000620895 WDR62O43379 1518 aa33.23■■■□□ 2.91
PMPCA-211ENST00000620895 CEP164Q9UPV0 1460 aa33.18■■■□□ 2.9
PMPCA-211ENST00000620895 TOP2AP11388 1531 aaKnown RBP33.13■■■□□ 2.89
PMPCA-211ENST00000620895 CFTRP13569 1480 aa33.12■■■□□ 2.89
PMPCA-211ENST00000620895 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
PMPCA-211ENST00000620895 SUPT5HO00267 1087 aaKnown RBP32.98■■■□□ 2.87
PMPCA-211ENST00000620895 PRDM2Q13029 1718 aa32.82■■■□□ 2.85
PMPCA-211ENST00000620895 URB2Q14146 1524 aaKnown RBP32.79■■■□□ 2.84
PMPCA-211ENST00000620895 CCDC88BA6NC98 1476 aa32.7■■■□□ 2.83
PMPCA-211ENST00000620895 OSCARQ8IYS5 282 aa32.6■■■□□ 2.81
PMPCA-211ENST00000620895 TRIM41Q8WV44 630 aa32.59■■■□□ 2.81
PMPCA-211ENST00000620895 IFT140Q96RY7 1462 aa32.53■■■□□ 2.8
PMPCA-211ENST00000620895 ABCC8Q09428 1581 aa32.52■■■□□ 2.8
PMPCA-211ENST00000620895 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
PMPCA-211ENST00000620895 DNMBPQ6XZF7 1577 aa32.38■■■□□ 2.77
PMPCA-211ENST00000620895 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
PMPCA-211ENST00000620895 EIF4G3O43432 1585 aaKnown RBP32.26■■■□□ 2.75
PMPCA-211ENST00000620895 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
PMPCA-211ENST00000620895 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
PMPCA-211ENST00000620895 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
PMPCA-211ENST00000620895 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
PMPCA-211ENST00000620895 POLA1P09884 1462 aaPredicted RBP32.13■■■□□ 2.73
PMPCA-211ENST00000620895 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.737e-8■■■□□ 17.6
PMPCA-211ENST00000620895 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
PMPCA-211ENST00000620895 CHD1O14646 1710 aa32■■■□□ 2.71
PMPCA-211ENST00000620895 WDR97A6NE52 1622 aa32■■■□□ 2.71
PMPCA-211ENST00000620895 SOGA1O94964 1423 aa31.99■■■□□ 2.71
PMPCA-211ENST00000620895 RAD54L2Q9Y4B4 1467 aa31.95■■■□□ 2.7
PMPCA-211ENST00000620895 FGD5Q6ZNL6 1462 aa31.91■■■□□ 2.7
PMPCA-211ENST00000620895 FBLN2P98095 1184 aa31.89■■■□□ 2.7
PMPCA-211ENST00000620895 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
PMPCA-211ENST00000620895 CUX1P39880 1505 aa31.85■■■□□ 2.69
PMPCA-211ENST00000620895 SNAPC4Q5SXM2 1469 aa31.79■■■□□ 2.68
PMPCA-211ENST00000620895 MAGI1Q96QZ7 1491 aaPredicted RBP31.79■■■□□ 2.68
PMPCA-211ENST00000620895 CYB5RLQ6IPT4 315 aa31.78■■■□□ 2.68
PMPCA-211ENST00000620895 GRIN2BQ13224 1484 aa31.76■■■□□ 2.67
PMPCA-211ENST00000620895 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
PMPCA-211ENST00000620895 CHMP7Q8WUX9 453 aaPredicted RBP31.71■■■□□ 2.67
PMPCA-211ENST00000620895 SYNJ1O43426 1573 aa31.7■■■□□ 2.67
PMPCA-211ENST00000620895 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
PMPCA-211ENST00000620895 SYNJ2O15056 1496 aa31.65■■■□□ 2.66
PMPCA-211ENST00000620895 GAPVD1Q14C86 1478 aa31.61■■■□□ 2.65
PMPCA-211ENST00000620895 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
PMPCA-211ENST00000620895 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
PMPCA-211ENST00000620895 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
PMPCA-211ENST00000620895 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
PMPCA-211ENST00000620895 TRHP20396 242 aaPredicted RBP31.47■■■□□ 2.63
PMPCA-211ENST00000620895 BIVM-ERCC5R4GMW8 1640 aa31.4■■■□□ 2.62
PMPCA-211ENST00000620895 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
PMPCA-211ENST00000620895 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
PMPCA-211ENST00000620895 ADAMTS12P58397 1594 aa31.3■■■□□ 2.6
PMPCA-211ENST00000620895 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
PMPCA-211ENST00000620895 ERICH3Q5RHP9 1530 aa31.23■■■□□ 2.59
PMPCA-211ENST00000620895 NUP160Q12769 1436 aa31.23■■■□□ 2.59
PMPCA-211ENST00000620895 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
PMPCA-211ENST00000620895 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
PMPCA-211ENST00000620895 SHROOM2Q13796 1616 aa31.1■■■□□ 2.57
PMPCA-211ENST00000620895 ERCC6L2Q5T890 1561 aa31.06■■■□□ 2.56
PMPCA-211ENST00000620895 PRG4Q92954 1404 aaPredicted RBP30.9■■■□□ 2.54
PMPCA-211ENST00000620895 JPH4Q96JJ6 628 aa30.88■■■□□ 2.53
PMPCA-211ENST00000620895 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms