RNA–Protein interactions for RNA: ENST00000620734.1

AC236972.3-202, humanhuman

TSL 3 BASIC

Gene AC236972.3, Length 1,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC236972.3-202ENST00000620734 AEBP2Q6ZN18 517 aaPredicted RBP30.61■■■□□ 2.49
AC236972.3-202ENST00000620734 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
AC236972.3-202ENST00000620734 SENP3Q9H4L4 574 aaPredicted RBP26.07■■□□□ 1.76
AC236972.3-202ENST00000620734 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
AC236972.3-202ENST00000620734 FOXD1Q16676 465 aa24.5■■□□□ 1.51
AC236972.3-202ENST00000620734 POTEDQ86YR6 584 aa23.84■■□□□ 1.41
AC236972.3-202ENST00000620734 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
AC236972.3-202ENST00000620734 MSH5O43196 834 aa23.07■■□□□ 1.28
AC236972.3-202ENST00000620734 PIAS4Q8N2W9 510 aaPredicted RBP22.65■■□□□ 1.22
AC236972.3-202ENST00000620734 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
AC236972.3-202ENST00000620734 ADRA2BP18089 450 aa22.27■■□□□ 1.16
AC236972.3-202ENST00000620734 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
AC236972.3-202ENST00000620734 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
AC236972.3-202ENST00000620734 ABCC9O60706 1549 aa20.7■□□□□ 0.9
AC236972.3-202ENST00000620734 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
AC236972.3-202ENST00000620734 DMRT2Q9Y5R5 561 aa20.6■□□□□ 0.89
AC236972.3-202ENST00000620734 CACNB1Q02641 598 aaPredicted RBP20.28■□□□□ 0.84
AC236972.3-202ENST00000620734 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
AC236972.3-202ENST00000620734 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
AC236972.3-202ENST00000620734 NACADO15069 1562 aa19.82■□□□□ 0.76
AC236972.3-202ENST00000620734 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
AC236972.3-202ENST00000620734 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
AC236972.3-202ENST00000620734 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
AC236972.3-202ENST00000620734 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
AC236972.3-202ENST00000620734 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
AC236972.3-202ENST00000620734 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
AC236972.3-202ENST00000620734 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
AC236972.3-202ENST00000620734 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
AC236972.3-202ENST00000620734 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
AC236972.3-202ENST00000620734 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC236972.3-202ENST00000620734 C1QBPQ07021 282 aaKnown RBP19.3■□□□□ 0.68
AC236972.3-202ENST00000620734 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
AC236972.3-202ENST00000620734 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
AC236972.3-202ENST00000620734 SCRIBQ14160 1630 aa19.21■□□□□ 0.67
AC236972.3-202ENST00000620734 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
AC236972.3-202ENST00000620734 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
AC236972.3-202ENST00000620734 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
AC236972.3-202ENST00000620734 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
AC236972.3-202ENST00000620734 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
AC236972.3-202ENST00000620734 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
AC236972.3-202ENST00000620734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
AC236972.3-202ENST00000620734 POTEHQ6S545 545 aa18.5■□□□□ 0.55
AC236972.3-202ENST00000620734 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
AC236972.3-202ENST00000620734 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
AC236972.3-202ENST00000620734 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
AC236972.3-202ENST00000620734 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
AC236972.3-202ENST00000620734 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
AC236972.3-202ENST00000620734 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
AC236972.3-202ENST00000620734 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
AC236972.3-202ENST00000620734 DSG3P32926 999 aa18.21■□□□□ 0.51
AC236972.3-202ENST00000620734 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.51
AC236972.3-202ENST00000620734 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
AC236972.3-202ENST00000620734 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
AC236972.3-202ENST00000620734 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
AC236972.3-202ENST00000620734 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
AC236972.3-202ENST00000620734 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
AC236972.3-202ENST00000620734 CAPN15O75808 1086 aa18.12■□□□□ 0.49
AC236972.3-202ENST00000620734 WIZO95785 1651 aa18.01■□□□□ 0.47
AC236972.3-202ENST00000620734 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
AC236972.3-202ENST00000620734 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
AC236972.3-202ENST00000620734 NESP48681 1621 aa17.87■□□□□ 0.45
AC236972.3-202ENST00000620734 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
AC236972.3-202ENST00000620734 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
AC236972.3-202ENST00000620734 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
AC236972.3-202ENST00000620734 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
AC236972.3-202ENST00000620734 CUX2O14529 1486 aa17.7■□□□□ 0.42
AC236972.3-202ENST00000620734 ABCB7O75027 752 aa17.69■□□□□ 0.42
AC236972.3-202ENST00000620734 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
AC236972.3-202ENST00000620734 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
AC236972.3-202ENST00000620734 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
AC236972.3-202ENST00000620734 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
AC236972.3-202ENST00000620734 CFTRP13569 1480 aa17.6■□□□□ 0.41
AC236972.3-202ENST00000620734 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
AC236972.3-202ENST00000620734 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
AC236972.3-202ENST00000620734 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
AC236972.3-202ENST00000620734 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
AC236972.3-202ENST00000620734 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
AC236972.3-202ENST00000620734 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
AC236972.3-202ENST00000620734 WDR62O43379 1518 aa17.47■□□□□ 0.39
AC236972.3-202ENST00000620734 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
AC236972.3-202ENST00000620734 APLP2Q06481 763 aa17.43■□□□□ 0.38
AC236972.3-202ENST00000620734 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
AC236972.3-202ENST00000620734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
AC236972.3-202ENST00000620734 KCNA4P22459 653 aa17.28■□□□□ 0.36
AC236972.3-202ENST00000620734 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
AC236972.3-202ENST00000620734 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
AC236972.3-202ENST00000620734 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
AC236972.3-202ENST00000620734 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
AC236972.3-202ENST00000620734 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
AC236972.3-202ENST00000620734 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
AC236972.3-202ENST00000620734 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
AC236972.3-202ENST00000620734 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
AC236972.3-202ENST00000620734 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
AC236972.3-202ENST00000620734 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
AC236972.3-202ENST00000620734 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
AC236972.3-202ENST00000620734 CUX1P39880 1505 aa17.07■□□□□ 0.32
AC236972.3-202ENST00000620734 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
AC236972.3-202ENST00000620734 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
AC236972.3-202ENST00000620734 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
AC236972.3-202ENST00000620734 POLA2Q14181 598 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms