RNA–Protein interactions for RNA: ENST00000619323.1

AC048341.3-201, humanhuman

BASIC

Gene AC048341.3, Length 491 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048341.3-201ENST00000619323 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
AC048341.3-201ENST00000619323 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
AC048341.3-201ENST00000619323 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
AC048341.3-201ENST00000619323 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
AC048341.3-201ENST00000619323 FOXD1Q16676 465 aa18.97■□□□□ 0.63
AC048341.3-201ENST00000619323 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
AC048341.3-201ENST00000619323 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
AC048341.3-201ENST00000619323 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
AC048341.3-201ENST00000619323 ADRA2BP18089 450 aa17.92■□□□□ 0.46
AC048341.3-201ENST00000619323 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
AC048341.3-201ENST00000619323 MSH5O43196 834 aa17.71■□□□□ 0.43
AC048341.3-201ENST00000619323 ABCC9O60706 1549 aa17.62■□□□□ 0.41
AC048341.3-201ENST00000619323 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
AC048341.3-201ENST00000619323 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
AC048341.3-201ENST00000619323 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
AC048341.3-201ENST00000619323 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
AC048341.3-201ENST00000619323 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
AC048341.3-201ENST00000619323 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
AC048341.3-201ENST00000619323 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
AC048341.3-201ENST00000619323 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
AC048341.3-201ENST00000619323 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC048341.3-201ENST00000619323 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
AC048341.3-201ENST00000619323 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
AC048341.3-201ENST00000619323 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
AC048341.3-201ENST00000619323 NACADO15069 1562 aa15.92■□□□□ 0.14
AC048341.3-201ENST00000619323 CECR2Q9BXF3 1484 aa15.92■□□□□ 0.14
AC048341.3-201ENST00000619323 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
AC048341.3-201ENST00000619323 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
AC048341.3-201ENST00000619323 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
AC048341.3-201ENST00000619323 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
AC048341.3-201ENST00000619323 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
AC048341.3-201ENST00000619323 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
AC048341.3-201ENST00000619323 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
AC048341.3-201ENST00000619323 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
AC048341.3-201ENST00000619323 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
AC048341.3-201ENST00000619323 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
AC048341.3-201ENST00000619323 KCNA4P22459 653 aa15.45■□□□□ 0.06
AC048341.3-201ENST00000619323 CUX2O14529 1486 aa15.45■□□□□ 0.06
AC048341.3-201ENST00000619323 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
AC048341.3-201ENST00000619323 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.04
AC048341.3-201ENST00000619323 ERCC6Q03468 1493 aa15.27■□□□□ 0.03
AC048341.3-201ENST00000619323 SCRIBQ14160 1630 aa15.21■□□□□ 0.03
AC048341.3-201ENST00000619323 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
AC048341.3-201ENST00000619323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
AC048341.3-201ENST00000619323 CACNB1Q02641 598 aaPredicted RBP15.02■□□□□ -0
AC048341.3-201ENST00000619323 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
AC048341.3-201ENST00000619323 NESP48681 1621 aa14.88□□□□□ -0.03
AC048341.3-201ENST00000619323 THOC2Q8NI27 1593 aaKnown RBP14.86□□□□□ -0.03
AC048341.3-201ENST00000619323 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
AC048341.3-201ENST00000619323 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
AC048341.3-201ENST00000619323 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
AC048341.3-201ENST00000619323 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
AC048341.3-201ENST00000619323 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
AC048341.3-201ENST00000619323 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
AC048341.3-201ENST00000619323 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
AC048341.3-201ENST00000619323 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
AC048341.3-201ENST00000619323 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
AC048341.3-201ENST00000619323 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
AC048341.3-201ENST00000619323 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
AC048341.3-201ENST00000619323 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
AC048341.3-201ENST00000619323 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
AC048341.3-201ENST00000619323 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
AC048341.3-201ENST00000619323 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
AC048341.3-201ENST00000619323 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
AC048341.3-201ENST00000619323 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
AC048341.3-201ENST00000619323 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
AC048341.3-201ENST00000619323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
AC048341.3-201ENST00000619323 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
AC048341.3-201ENST00000619323 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
AC048341.3-201ENST00000619323 APLP2Q06481 763 aa14.43□□□□□ -0.1
AC048341.3-201ENST00000619323 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
AC048341.3-201ENST00000619323 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
AC048341.3-201ENST00000619323 WDR62O43379 1518 aa14.42□□□□□ -0.1
AC048341.3-201ENST00000619323 CAPN15O75808 1086 aa14.42□□□□□ -0.1
AC048341.3-201ENST00000619323 BAZ1BQ9UIG0 1483 aaKnown RBP14.41□□□□□ -0.1
AC048341.3-201ENST00000619323 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
AC048341.3-201ENST00000619323 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
AC048341.3-201ENST00000619323 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
AC048341.3-201ENST00000619323 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
AC048341.3-201ENST00000619323 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
AC048341.3-201ENST00000619323 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
AC048341.3-201ENST00000619323 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
AC048341.3-201ENST00000619323 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
AC048341.3-201ENST00000619323 DSG3P32926 999 aa14.23□□□□□ -0.13
AC048341.3-201ENST00000619323 ARAP1Q96P48 1450 aa14.22□□□□□ -0.13
AC048341.3-201ENST00000619323 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
AC048341.3-201ENST00000619323 ZBTB22O15209 634 aa14.17□□□□□ -0.14
AC048341.3-201ENST00000619323 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
AC048341.3-201ENST00000619323 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
AC048341.3-201ENST00000619323 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
AC048341.3-201ENST00000619323 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
AC048341.3-201ENST00000619323 ABCB7O75027 752 aa14.07□□□□□ -0.16
AC048341.3-201ENST00000619323 CHD1O14646 1710 aa14.05□□□□□ -0.16
AC048341.3-201ENST00000619323 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
AC048341.3-201ENST00000619323 FBLN2P98095 1184 aa13.99□□□□□ -0.17
AC048341.3-201ENST00000619323 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
AC048341.3-201ENST00000619323 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
AC048341.3-201ENST00000619323 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
AC048341.3-201ENST00000619323 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
AC048341.3-201ENST00000619323 POLA2Q14181 598 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms