RNA–Protein interactions for RNA: ENST00000619038.4

CDRT4-204, CMT1A duplicated region transcript 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT4, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-204ENST00000619038 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
CDRT4-204ENST00000619038 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
CDRT4-204ENST00000619038 HRCP23327 699 aa19.99■□□□□ 0.79
CDRT4-204ENST00000619038 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
CDRT4-204ENST00000619038 MYT1Q01538 1121 aa19.35■□□□□ 0.69
CDRT4-204ENST00000619038 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
CDRT4-204ENST00000619038 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
CDRT4-204ENST00000619038 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
CDRT4-204ENST00000619038 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
CDRT4-204ENST00000619038 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
CDRT4-204ENST00000619038 NEUROD1Q13562 356 aa18.56■□□□□ 0.56
CDRT4-204ENST00000619038 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
CDRT4-204ENST00000619038 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
CDRT4-204ENST00000619038 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
CDRT4-204ENST00000619038 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
CDRT4-204ENST00000619038 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
CDRT4-204ENST00000619038 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
CDRT4-204ENST00000619038 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
CDRT4-204ENST00000619038 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
CDRT4-204ENST00000619038 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
CDRT4-204ENST00000619038 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
CDRT4-204ENST00000619038 FAM9AQ8IZU1 332 aaPredicted RBP18.16■□□□□ 0.5
CDRT4-204ENST00000619038 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
CDRT4-204ENST00000619038 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
CDRT4-204ENST00000619038 DIEXFQ68CQ4 756 aaKnown RBP17.92■□□□□ 0.46
CDRT4-204ENST00000619038 ANP32EQ9BTT0 268 aa17.82■□□□□ 0.44
CDRT4-204ENST00000619038 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
CDRT4-204ENST00000619038 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
CDRT4-204ENST00000619038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
CDRT4-204ENST00000619038 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
CDRT4-204ENST00000619038 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
CDRT4-204ENST00000619038 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
CDRT4-204ENST00000619038 MIER1Q8N108 512 aa17.46■□□□□ 0.39
CDRT4-204ENST00000619038 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
CDRT4-204ENST00000619038 ZNF316A6NFI3 1004 aaPredicted RBP17.41■□□□□ 0.38
CDRT4-204ENST00000619038 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
CDRT4-204ENST00000619038 APLP2Q06481 763 aa17.32■□□□□ 0.36
CDRT4-204ENST00000619038 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
CDRT4-204ENST00000619038 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
CDRT4-204ENST00000619038 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
CDRT4-204ENST00000619038 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
CDRT4-204ENST00000619038 RBM19Q9Y4C8 960 aaKnown RBP17.06■□□□□ 0.32
CDRT4-204ENST00000619038 MSH5O43196 834 aa17.04■□□□□ 0.32
CDRT4-204ENST00000619038 BCANQ96GW7 911 aa17.01■□□□□ 0.31
CDRT4-204ENST00000619038 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
CDRT4-204ENST00000619038 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
CDRT4-204ENST00000619038 FKBP8Q14318 412 aa16.83■□□□□ 0.28
CDRT4-204ENST00000619038 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
CDRT4-204ENST00000619038 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
CDRT4-204ENST00000619038 ITGAEP38570 1179 aa16.77■□□□□ 0.27
CDRT4-204ENST00000619038 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
CDRT4-204ENST00000619038 UBE2Q2Q8WVN8 375 aa16.7■□□□□ 0.26
CDRT4-204ENST00000619038 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
CDRT4-204ENST00000619038 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
CDRT4-204ENST00000619038 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
CDRT4-204ENST00000619038 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
CDRT4-204ENST00000619038 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.24
CDRT4-204ENST00000619038 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
CDRT4-204ENST00000619038 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
CDRT4-204ENST00000619038 NEFLP07196 543 aa16.53■□□□□ 0.24
CDRT4-204ENST00000619038 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
CDRT4-204ENST00000619038 NBR1Q14596 966 aa16.48■□□□□ 0.23
CDRT4-204ENST00000619038 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
CDRT4-204ENST00000619038 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
CDRT4-204ENST00000619038 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
CDRT4-204ENST00000619038 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
CDRT4-204ENST00000619038 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
CDRT4-204ENST00000619038 TRIM52Q96A61 297 aa16.37■□□□□ 0.21
CDRT4-204ENST00000619038 ABCC9O60706 1549 aa16.36■□□□□ 0.21
CDRT4-204ENST00000619038 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
CDRT4-204ENST00000619038 NOP58Q9Y2X3 529 aaKnown RBP16.33■□□□□ 0.2
CDRT4-204ENST00000619038 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
CDRT4-204ENST00000619038 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
CDRT4-204ENST00000619038 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
CDRT4-204ENST00000619038 PKNOX2Q96KN3 472 aa16.28■□□□□ 0.2
CDRT4-204ENST00000619038 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
CDRT4-204ENST00000619038 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
CDRT4-204ENST00000619038 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
CDRT4-204ENST00000619038 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
CDRT4-204ENST00000619038 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
CDRT4-204ENST00000619038 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
CDRT4-204ENST00000619038 WASHC2AQ641Q2 1341 aa16.1■□□□□ 0.17
CDRT4-204ENST00000619038 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
CDRT4-204ENST00000619038 PPP4R2Q9NY27 417 aa16.09■□□□□ 0.17
CDRT4-204ENST00000619038 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.17
CDRT4-204ENST00000619038 SOGA1O94964 1423 aa16.07■□□□□ 0.16
CDRT4-204ENST00000619038 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
CDRT4-204ENST00000619038 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
CDRT4-204ENST00000619038 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
CDRT4-204ENST00000619038 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
CDRT4-204ENST00000619038 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
CDRT4-204ENST00000619038 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
CDRT4-204ENST00000619038 NACADO15069 1562 aa16.03■□□□□ 0.16
CDRT4-204ENST00000619038 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
CDRT4-204ENST00000619038 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.15
CDRT4-204ENST00000619038 ANP32CO43423 234 aa16.01■□□□□ 0.15
CDRT4-204ENST00000619038 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
CDRT4-204ENST00000619038 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
CDRT4-204ENST00000619038 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
CDRT4-204ENST00000619038 ANP32AP39687 249 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms