RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 AEBP2Q6ZN18 517 aaPredicted RBP35.42■■■■□ 3.26
UCHL3-206ENST00000618773 CHIC1Q5VXU3 224 aa33.72■■■□□ 2.99
UCHL3-206ENST00000618773 SENP3Q9H4L4 574 aaPredicted RBP30.3■■■□□ 2.44
UCHL3-206ENST00000618773 PHF23Q9BUL5 403 aaPredicted RBP29.91■■■□□ 2.38
UCHL3-206ENST00000618773 FOXD1Q16676 465 aa28.19■■■□□ 2.1
UCHL3-206ENST00000618773 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
UCHL3-206ENST00000618773 MSH5O43196 834 aa26.42■■□□□ 1.82
UCHL3-206ENST00000618773 PIAS4Q8N2W9 510 aaPredicted RBP26.41■■□□□ 1.82
UCHL3-206ENST00000618773 PPP6R1Q9UPN7 881 aa26.37■■□□□ 1.81
UCHL3-206ENST00000618773 ADRA2BP18089 450 aa26.33■■□□□ 1.81
UCHL3-206ENST00000618773 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
UCHL3-206ENST00000618773 POTEDQ86YR6 584 aa25.67■■□□□ 1.7
UCHL3-206ENST00000618773 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
UCHL3-206ENST00000618773 MAPK8IP2Q13387 824 aaPredicted RBP24.17■■□□□ 1.46
UCHL3-206ENST00000618773 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
UCHL3-206ENST00000618773 PPP4R3CPQ6ZMV5 832 aa23.68■■□□□ 1.38
UCHL3-206ENST00000618773 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.38
UCHL3-206ENST00000618773 ABCC9O60706 1549 aa23.53■■□□□ 1.36
UCHL3-206ENST00000618773 CNKSR2Q8WXI2 1034 aa23.23■■□□□ 1.31
UCHL3-206ENST00000618773 DCAF8L1A6NGE4 600 aa23.14■■□□□ 1.29
UCHL3-206ENST00000618773 HOXD11P31277 338 aaPredicted RBP23.12■■□□□ 1.29
UCHL3-206ENST00000618773 RNF216Q9NWF9 866 aaPredicted RBP22.99■■□□□ 1.27
UCHL3-206ENST00000618773 NCBP3Q53F19 620 aaKnown RBP22.85■■□□□ 1.25
UCHL3-206ENST00000618773 CACNB1Q02641 598 aaPredicted RBP22.69■■□□□ 1.22
UCHL3-206ENST00000618773 RNF39Q9H2S5 420 aa22.5■■□□□ 1.19
UCHL3-206ENST00000618773 NPM3O75607 178 aaKnown RBP22.42■■□□□ 1.18
UCHL3-206ENST00000618773 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
UCHL3-206ENST00000618773 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
UCHL3-206ENST00000618773 NACADO15069 1562 aa22.24■■□□□ 1.15
UCHL3-206ENST00000618773 C1QBPQ07021 282 aaKnown RBP22.22■■□□□ 1.15
UCHL3-206ENST00000618773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.13■■□□□ 1.137e-7■■□□□ 12.5
UCHL3-206ENST00000618773 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
UCHL3-206ENST00000618773 KCNA4P22459 653 aa22.03■■□□□ 1.12
UCHL3-206ENST00000618773 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
UCHL3-206ENST00000618773 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
UCHL3-206ENST00000618773 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
UCHL3-206ENST00000618773 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
UCHL3-206ENST00000618773 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
UCHL3-206ENST00000618773 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
UCHL3-206ENST00000618773 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
UCHL3-206ENST00000618773 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
UCHL3-206ENST00000618773 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
UCHL3-206ENST00000618773 SLC4A2P04920 1241 aa21.37■■□□□ 1.01
UCHL3-206ENST00000618773 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
UCHL3-206ENST00000618773 CAPN15O75808 1086 aa21.31■■□□□ 1
UCHL3-206ENST00000618773 SPINK5Q9NQ38 1064 aaPredicted RBP21.27■■□□□ 1
UCHL3-206ENST00000618773 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
UCHL3-206ENST00000618773 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
UCHL3-206ENST00000618773 APLP2Q06481 763 aa21.11■□□□□ 0.97
UCHL3-206ENST00000618773 DSG3P32926 999 aa21.09■□□□□ 0.97
UCHL3-206ENST00000618773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
UCHL3-206ENST00000618773 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
UCHL3-206ENST00000618773 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
UCHL3-206ENST00000618773 SAMD1Q6SPF0 538 aaPredicted RBP20.93■□□□□ 0.94
UCHL3-206ENST00000618773 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
UCHL3-206ENST00000618773 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
UCHL3-206ENST00000618773 ABCB7O75027 752 aa20.79■□□□□ 0.92
UCHL3-206ENST00000618773 MYCNP04198 464 aaPredicted RBP20.77■□□□□ 0.92
UCHL3-206ENST00000618773 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
UCHL3-206ENST00000618773 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
UCHL3-206ENST00000618773 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
UCHL3-206ENST00000618773 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
UCHL3-206ENST00000618773 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
UCHL3-206ENST00000618773 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
UCHL3-206ENST00000618773 POLA2Q14181 598 aa20.4■□□□□ 0.86
UCHL3-206ENST00000618773 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
UCHL3-206ENST00000618773 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
UCHL3-206ENST00000618773 NESP48681 1621 aa20.26■□□□□ 0.83
UCHL3-206ENST00000618773 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
UCHL3-206ENST00000618773 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
UCHL3-206ENST00000618773 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
UCHL3-206ENST00000618773 CUX2O14529 1486 aa20.24■□□□□ 0.83
UCHL3-206ENST00000618773 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
UCHL3-206ENST00000618773 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
UCHL3-206ENST00000618773 ZBTB22O15209 634 aa20.19■□□□□ 0.82
UCHL3-206ENST00000618773 POTEHQ6S545 545 aa20.16■□□□□ 0.82
UCHL3-206ENST00000618773 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
UCHL3-206ENST00000618773 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
UCHL3-206ENST00000618773 KIF21AQ7Z4S6 1674 aa20.11■□□□□ 0.81
UCHL3-206ENST00000618773 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
UCHL3-206ENST00000618773 WIZO95785 1651 aa20.06■□□□□ 0.8
UCHL3-206ENST00000618773 ZBTB12Q9Y330 459 aaPredicted RBP20.01■□□□□ 0.79
UCHL3-206ENST00000618773 ATXN8OSP0DMR3 200 aa19.93■□□□□ 0.78
UCHL3-206ENST00000618773 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
UCHL3-206ENST00000618773 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
UCHL3-206ENST00000618773 WDR62O43379 1518 aa19.78■□□□□ 0.76
UCHL3-206ENST00000618773 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
UCHL3-206ENST00000618773 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
UCHL3-206ENST00000618773 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
UCHL3-206ENST00000618773 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
UCHL3-206ENST00000618773 AKT1S1Q96B36 256 aa19.71■□□□□ 0.75
UCHL3-206ENST00000618773 CHRDL2Q6WN34 429 aa19.7■□□□□ 0.74
UCHL3-206ENST00000618773 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
UCHL3-206ENST00000618773 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
UCHL3-206ENST00000618773 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
UCHL3-206ENST00000618773 CFTRP13569 1480 aa19.66■□□□□ 0.74
UCHL3-206ENST00000618773 FBLN2P98095 1184 aa19.57■□□□□ 0.72
UCHL3-206ENST00000618773 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
UCHL3-206ENST00000618773 REM2Q8IYK8 340 aaPredicted RBP19.52■□□□□ 0.72
UCHL3-206ENST00000618773 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms