RNA–Protein interactions for RNA: ENST00000618656.1

RPS20-212, Transcript of ribosomal protein S20, humanhuman

TSL 3 BASIC

Gene RPS20, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-212ENST00000618656 NOLC1Q14978 699 aaKnown RBP eCLIP10.39□□□□□ -0.751e-323■■■■■ 136.5
RPS20-212ENST00000618656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.04□□□□□ -0.89e-8■■■■■ 86.3
RPS20-212ENST00000618656 EFTUD2Q15029 972 aaKnown RBP eCLIP9□□□□□ -0.977e-14■■■■■ 59.3
RPS20-212ENST00000618656 SMNDC1O75940 238 aaKnown RBP eCLIP8.48□□□□□ -1.052e-69■■■■■ 35.4
RPS20-212ENST00000618656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.128e-13■■■■■ 33.8
RPS20-212ENST00000618656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.47□□□□□ -0.892e-12■■■■■ 33
RPS20-212ENST00000618656 SF3B4Q15427 424 aaKnown RBP eCLIP8.68□□□□□ -1.023e-11■■■■■ 27.3
RPS20-212ENST00000618656 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.442e-61■■■■■ 27.2
RPS20-212ENST00000618656 DKC1O60832 514 aaKnown RBP eCLIP10.7□□□□□ -0.71e-323■■■■□ 26.7
RPS20-212ENST00000618656 PTBP1P26599 531 aaKnown RBP eCLIP7.32□□□□□ -1.241e-20■■■■□ 23.8
RPS20-212ENST00000618656 AATFQ9NY61 560 aaKnown RBP eCLIP11.53□□□□□ -0.568e-21■■■■□ 22.3
RPS20-212ENST00000618656 RBM22Q9NW64 420 aaKnown RBP eCLIP9.56□□□□□ -0.883e-7■■■■□ 22.2
RPS20-212ENST00000618656 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.585e-19■■■■□ 21.5
RPS20-212ENST00000618656 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.252e-9■■■■□ 21.3
RPS20-212ENST00000618656 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.79□□□□□ -0.681e-16■■■■□ 20.3
RPS20-212ENST00000618656 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.2□□□□□ -0.945e-7■■■■□ 19.7
RPS20-212ENST00000618656 DDX3XO00571 662 aaKnown RBP eCLIP9.76□□□□□ -0.852e-37■■■□□ 16.9
RPS20-212ENST00000618656 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.773e-9■■■□□ 16.5
RPS20-212ENST00000618656 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.532e-7■■■□□ 15.2
RPS20-212ENST00000618656 RPS3P23396 243 aaKnown RBP eCLIP9.26□□□□□ -0.933e-11■■■□□ 14.9
RPS20-212ENST00000618656 TRA2AQ13595 282 aaKnown RBP eCLIP9.35□□□□□ -0.912e-26■■□□□ 14.2
RPS20-212ENST00000618656 AARSP49588 968 aaKnown RBP eCLIP10.31□□□□□ -0.761e-14■■□□□ 14
RPS20-212ENST00000618656 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.671e-7■■□□□ 13.9
RPS20-212ENST00000618656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.716e-8■■□□□ 13.7
RPS20-212ENST00000618656 SUB1P53999 127 aaKnown RBP eCLIP7.21□□□□□ -1.267e-7■■□□□ 13.2
RPS20-212ENST00000618656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -11e-15■■□□□ 13.1
RPS20-212ENST00000618656 TROVE2P10155 538 aaKnown RBP eCLIP8.51□□□□□ -1.051e-323■■□□□ 13
RPS20-212ENST00000618656 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.53□□□□□ -0.722e-59■■□□□ 12.1
RPS20-212ENST00000618656 XRCC6P12956 609 aaKnown RBP eCLIP10.65□□□□□ -0.79e-18■■□□□ 12
RPS20-212ENST00000618656 HLTFQ14527 1009 aaKnown RBP eCLIP9.41□□□□□ -0.93e-7■■□□□ 11.9
RPS20-212ENST00000618656 LARP4Q71RC2 724 aaKnown RBP eCLIP8.68□□□□□ -1.024e-10■■□□□ 11.8
RPS20-212ENST00000618656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.73□□□□□ -0.856e-24■■□□□ 11.6
RPS20-212ENST00000618656 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.11e-7■□□□□ 11.1
RPS20-212ENST00000618656 AKAP1Q92667 903 aaKnown RBP eCLIP8.32□□□□□ -1.083e-7■□□□□ 11.1
RPS20-212ENST00000618656 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.99□□□□□ -0.814e-7■□□□□ 10.5
RPS20-212ENST00000618656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.19e-14■□□□□ 10.5
RPS20-212ENST00000618656 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.431e-15■□□□□ 10.3
RPS20-212ENST00000618656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.2■□□□□ 0.021e-70■□□□□ 10.3
RPS20-212ENST00000618656 ZRANB2O95218 330 aaKnown RBP eCLIP9.56□□□□□ -0.882e-32■□□□□ 10.3
RPS20-212ENST00000618656 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.23□□□□□ -0.931e-58■□□□□ 10.1
RPS20-212ENST00000618656 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.442e-29■□□□□ 9.6
RPS20-212ENST00000618656 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.345e-9■□□□□ 9.5
RPS20-212ENST00000618656 RBM15Q96T37 977 aaKnown RBP eCLIP9.48□□□□□ -0.899e-16■□□□□ 9.2
RPS20-212ENST00000618656 PUM1Q14671 1186 aaKnown RBP eCLIP9.76□□□□□ -0.852e-13■□□□□ 9.2
RPS20-212ENST00000618656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.59□□□□□ -0.071e-7■□□□□ 9
RPS20-212ENST00000618656 DDX6P26196 483 aaKnown RBP eCLIP10.13□□□□□ -0.791e-34■□□□□ 8.9
RPS20-212ENST00000618656 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.81□□□□□ -12e-34■□□□□ 8.8
RPS20-212ENST00000618656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.06□□□□□ -0.82e-16■□□□□ 8.6
RPS20-212ENST00000618656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.84□□□□□ -0.991e-14■□□□□ 8.1
Retrieved 49 of 49 RNA–protein pairs in 17.3 ms