RNA–Protein interactions for RNA: ENST00000618578.1

U1.34-201, humanhuman

BASIC

Gene U1, Length 162 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.34-201ENST00000618578 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
U1.34-201ENST00000618578 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
U1.34-201ENST00000618578 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
U1.34-201ENST00000618578 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
U1.34-201ENST00000618578 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
U1.34-201ENST00000618578 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
U1.34-201ENST00000618578 PLPPR3Q6T4P5 718 aa11.83□□□□□ -0.52
U1.34-201ENST00000618578 KCNA4P22459 653 aa11.69□□□□□ -0.54
U1.34-201ENST00000618578 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
U1.34-201ENST00000618578 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
U1.34-201ENST00000618578 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
U1.34-201ENST00000618578 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
U1.34-201ENST00000618578 NCBP3Q53F19 620 aaKnown RBP11.33□□□□□ -0.6
U1.34-201ENST00000618578 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
U1.34-201ENST00000618578 ADRA2BP18089 450 aa11.07□□□□□ -0.64
U1.34-201ENST00000618578 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
U1.34-201ENST00000618578 SENP3Q9H4L4 574 aaPredicted RBP10.9□□□□□ -0.66
U1.34-201ENST00000618578 ZBTB22O15209 634 aa10.77□□□□□ -0.69
U1.34-201ENST00000618578 BCANQ96GW7 911 aa10.77□□□□□ -0.69
U1.34-201ENST00000618578 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
U1.34-201ENST00000618578 ARXQ96QS3 562 aa10.73□□□□□ -0.69
U1.34-201ENST00000618578 PLCB2Q00722 1185 aa10.65□□□□□ -0.7
U1.34-201ENST00000618578 CCDC180Q9P1Z9 1646 aa10.61□□□□□ -0.71
U1.34-201ENST00000618578 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
U1.34-201ENST00000618578 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
U1.34-201ENST00000618578 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
U1.34-201ENST00000618578 HAP1P54257 671 aaPredicted RBP10.57□□□□□ -0.72
U1.34-201ENST00000618578 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
U1.34-201ENST00000618578 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
U1.34-201ENST00000618578 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
U1.34-201ENST00000618578 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
U1.34-201ENST00000618578 FKBP8Q14318 412 aa10.52□□□□□ -0.73
U1.34-201ENST00000618578 HOMEZQ8IX15 550 aa10.44□□□□□ -0.74
U1.34-201ENST00000618578 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
U1.34-201ENST00000618578 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
U1.34-201ENST00000618578 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
U1.34-201ENST00000618578 ERICH6Q7L0X2 663 aa10.35□□□□□ -0.75
U1.34-201ENST00000618578 RANGAP1P46060 587 aaPredicted RBP10.34□□□□□ -0.75
U1.34-201ENST00000618578 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
U1.34-201ENST00000618578 SHROOM4Q9ULL8 1493 aa10.24□□□□□ -0.77
U1.34-201ENST00000618578 HRCP23327 699 aa10.19□□□□□ -0.78
U1.34-201ENST00000618578 SUPT5HO00267 1087 aaKnown RBP10.15□□□□□ -0.78
U1.34-201ENST00000618578 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
U1.34-201ENST00000618578 KDM2AQ9Y2K7 1162 aa10.11□□□□□ -0.79
U1.34-201ENST00000618578 TMEM132AQ24JP5 1023 aa10.09□□□□□ -0.79
U1.34-201ENST00000618578 MYO15BQ96JP2 1530 aa10.08□□□□□ -0.8
U1.34-201ENST00000618578 PODXL2Q9NZ53 605 aa10.08□□□□□ -0.8
U1.34-201ENST00000618578 C14orf37Q86TY3 774 aa10.06□□□□□ -0.8
U1.34-201ENST00000618578 FBLN2P98095 1184 aa10.03□□□□□ -0.8
U1.34-201ENST00000618578 CNKSR2Q8WXI2 1034 aa10.01□□□□□ -0.81
U1.34-201ENST00000618578 ABCC9O60706 1549 aa10.01□□□□□ -0.81
U1.34-201ENST00000618578 FOXD1Q16676 465 aa9.99□□□□□ -0.81
U1.34-201ENST00000618578 APLP2Q06481 763 aa9.93□□□□□ -0.82
U1.34-201ENST00000618578 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
U1.34-201ENST00000618578 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.92□□□□□ -0.82
U1.34-201ENST00000618578 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
U1.34-201ENST00000618578 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
U1.34-201ENST00000618578 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
U1.34-201ENST00000618578 TTBK1Q5TCY1 1321 aaPredicted RBP9.88□□□□□ -0.83
U1.34-201ENST00000618578 NBR1Q14596 966 aa9.87□□□□□ -0.83
U1.34-201ENST00000618578 TRIM26Q12899 539 aaPredicted RBP9.86□□□□□ -0.83
U1.34-201ENST00000618578 PAXIP1Q6ZW49 1069 aaPredicted RBP9.86□□□□□ -0.83
U1.34-201ENST00000618578 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
U1.34-201ENST00000618578 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
U1.34-201ENST00000618578 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
U1.34-201ENST00000618578 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
U1.34-201ENST00000618578 BBXQ8WY36 941 aaPredicted RBP9.84□□□□□ -0.83
U1.34-201ENST00000618578 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
U1.34-201ENST00000618578 MYT1Q01538 1121 aa9.8□□□□□ -0.84
U1.34-201ENST00000618578 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
U1.34-201ENST00000618578 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
U1.34-201ENST00000618578 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
U1.34-201ENST00000618578 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
U1.34-201ENST00000618578 NACADO15069 1562 aa9.72□□□□□ -0.85
U1.34-201ENST00000618578 PKD2Q13563 968 aa9.72□□□□□ -0.85
U1.34-201ENST00000618578 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
U1.34-201ENST00000618578 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
U1.34-201ENST00000618578 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
U1.34-201ENST00000618578 SCRIBQ14160 1630 aa9.65□□□□□ -0.86
U1.34-201ENST00000618578 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
U1.34-201ENST00000618578 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
U1.34-201ENST00000618578 UBTFP17480 764 aaKnown RBP9.62□□□□□ -0.87
U1.34-201ENST00000618578 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
U1.34-201ENST00000618578 PPARGC1BQ86YN6 1023 aaKnown RBP9.62□□□□□ -0.87
U1.34-201ENST00000618578 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
U1.34-201ENST00000618578 TRIM41Q8WV44 630 aa9.61□□□□□ -0.87
U1.34-201ENST00000618578 BAZ1AQ9NRL2 1556 aaPredicted RBP9.6□□□□□ -0.87
U1.34-201ENST00000618578 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
U1.34-201ENST00000618578 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
U1.34-201ENST00000618578 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
U1.34-201ENST00000618578 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
U1.34-201ENST00000618578 EEA1Q15075 1411 aa9.53□□□□□ -0.88
U1.34-201ENST00000618578 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
U1.34-201ENST00000618578 MROH2BQ7Z745 1585 aa9.51□□□□□ -0.89
U1.34-201ENST00000618578 TOP2AP11388 1531 aaKnown RBP9.48□□□□□ -0.89
U1.34-201ENST00000618578 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
U1.34-201ENST00000618578 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
U1.34-201ENST00000618578 WIZO95785 1651 aa9.42□□□□□ -0.9
U1.34-201ENST00000618578 TNIKQ9UKE5 1360 aa9.4□□□□□ -0.9
U1.34-201ENST00000618578 SMARCA4P51532 1647 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms