RNA–Protein interactions for RNA: ENST00000618416.1

SPDYE12P-201, Transcript of speedy/RINGO cell cycle regulator family member E12, pseudogene, humanhuman

BASIC

Gene SPDYE12P, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE12P-201ENST00000618416 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
SPDYE12P-201ENST00000618416 CCDC180Q9P1Z9 1646 aa35.4■■■■□ 3.26
SPDYE12P-201ENST00000618416 ABCC9O60706 1549 aa34.78■■■■□ 3.16
SPDYE12P-201ENST00000618416 RB1CC1Q8TDY2 1594 aa33.36■■■□□ 2.93
SPDYE12P-201ENST00000618416 NACADO15069 1562 aa33.26■■■□□ 2.92
SPDYE12P-201ENST00000618416 DCAF8L2P0C7V8 631 aa33.09■■■□□ 2.89
SPDYE12P-201ENST00000618416 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
SPDYE12P-201ENST00000618416 MYO15BQ96JP2 1530 aa32.99■■■□□ 2.87
SPDYE12P-201ENST00000618416 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
SPDYE12P-201ENST00000618416 UNC13AQ9UPW8 1703 aa32.67■■■□□ 2.82
SPDYE12P-201ENST00000618416 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
SPDYE12P-201ENST00000618416 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
SPDYE12P-201ENST00000618416 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
SPDYE12P-201ENST00000618416 SHROOM4Q9ULL8 1493 aa32■■■□□ 2.71
SPDYE12P-201ENST00000618416 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
SPDYE12P-201ENST00000618416 EIF4G1Q04637 1599 aaKnown RBP31.56■■■□□ 2.64
SPDYE12P-201ENST00000618416 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
SPDYE12P-201ENST00000618416 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
SPDYE12P-201ENST00000618416 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
SPDYE12P-201ENST00000618416 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
SPDYE12P-201ENST00000618416 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.51
SPDYE12P-201ENST00000618416 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
SPDYE12P-201ENST00000618416 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
SPDYE12P-201ENST00000618416 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
SPDYE12P-201ENST00000618416 HMGXB3Q12766 1538 aa30.57■■■□□ 2.49
SPDYE12P-201ENST00000618416 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
SPDYE12P-201ENST00000618416 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
SPDYE12P-201ENST00000618416 WIZO95785 1651 aa30.29■■■□□ 2.44
SPDYE12P-201ENST00000618416 RSF1Q96T23 1441 aaPredicted RBP30.16■■■□□ 2.42
SPDYE12P-201ENST00000618416 NESP48681 1621 aa30.07■■■□□ 2.4
SPDYE12P-201ENST00000618416 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
SPDYE12P-201ENST00000618416 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
SPDYE12P-201ENST00000618416 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
SPDYE12P-201ENST00000618416 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
SPDYE12P-201ENST00000618416 KIF21AQ7Z4S6 1674 aa29.74■■■□□ 2.35
SPDYE12P-201ENST00000618416 THOC2Q8NI27 1593 aaKnown RBP29.7■■■□□ 2.35
SPDYE12P-201ENST00000618416 CUX2O14529 1486 aa29.7■■■□□ 2.35
SPDYE12P-201ENST00000618416 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
SPDYE12P-201ENST00000618416 CFTRP13569 1480 aa29.58■■■□□ 2.33
SPDYE12P-201ENST00000618416 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
SPDYE12P-201ENST00000618416 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
SPDYE12P-201ENST00000618416 CEP164Q9UPV0 1460 aa29.47■■■□□ 2.31
SPDYE12P-201ENST00000618416 MRC2Q9UBG0 1479 aa29.46■■■□□ 2.31
SPDYE12P-201ENST00000618416 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
SPDYE12P-201ENST00000618416 WDR62O43379 1518 aa29.4■■■□□ 2.3
SPDYE12P-201ENST00000618416 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
SPDYE12P-201ENST00000618416 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
SPDYE12P-201ENST00000618416 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
SPDYE12P-201ENST00000618416 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
SPDYE12P-201ENST00000618416 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
SPDYE12P-201ENST00000618416 DNAJC5Q9H3Z4 198 aa28.86■■■□□ 2.21
SPDYE12P-201ENST00000618416 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
SPDYE12P-201ENST00000618416 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
SPDYE12P-201ENST00000618416 CUX1P39880 1505 aa28.75■■■□□ 2.19
SPDYE12P-201ENST00000618416 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
SPDYE12P-201ENST00000618416 TARBP1Q13395 1621 aaKnown RBP28.71■■■□□ 2.19
SPDYE12P-201ENST00000618416 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
SPDYE12P-201ENST00000618416 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
SPDYE12P-201ENST00000618416 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
SPDYE12P-201ENST00000618416 SOGA1O94964 1423 aa28.54■■■□□ 2.16
SPDYE12P-201ENST00000618416 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
SPDYE12P-201ENST00000618416 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
SPDYE12P-201ENST00000618416 SYNJ1O43426 1573 aa28.47■■■□□ 2.15
SPDYE12P-201ENST00000618416 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
SPDYE12P-201ENST00000618416 WRNQ14191 1432 aaPredicted RBP eCLIP28.44■■■□□ 2.14
SPDYE12P-201ENST00000618416 TOP2BQ02880 1626 aa28.43■■■□□ 2.14
SPDYE12P-201ENST00000618416 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
SPDYE12P-201ENST00000618416 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
SPDYE12P-201ENST00000618416 CHD1O14646 1710 aa28.34■■■□□ 2.13
SPDYE12P-201ENST00000618416 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.13
SPDYE12P-201ENST00000618416 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
SPDYE12P-201ENST00000618416 OSCARQ8IYS5 282 aa28.31■■■□□ 2.12
SPDYE12P-201ENST00000618416 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
SPDYE12P-201ENST00000618416 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
SPDYE12P-201ENST00000618416 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
SPDYE12P-201ENST00000618416 MAGI1Q96QZ7 1491 aaPredicted RBP28.22■■■□□ 2.11
SPDYE12P-201ENST00000618416 FBLN2P98095 1184 aa28.14■■■□□ 2.1
SPDYE12P-201ENST00000618416 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
SPDYE12P-201ENST00000618416 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
SPDYE12P-201ENST00000618416 RIMBP3CA6NJZ7 1639 aa28.06■■■□□ 2.08
SPDYE12P-201ENST00000618416 RIMBP3BA6NNM3 1639 aa28.06■■■□□ 2.08
SPDYE12P-201ENST00000618416 RIMBP3Q9UFD9 1639 aa28.06■■■□□ 2.08
SPDYE12P-201ENST00000618416 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
SPDYE12P-201ENST00000618416 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
SPDYE12P-201ENST00000618416 ARHGEF11O15085 1522 aa28.02■■■□□ 2.08
SPDYE12P-201ENST00000618416 ERICH3Q5RHP9 1530 aa28■■■□□ 2.07
SPDYE12P-201ENST00000618416 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
SPDYE12P-201ENST00000618416 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
SPDYE12P-201ENST00000618416 FHAD1B1AJZ9 1412 aa27.91■■■□□ 2.06
SPDYE12P-201ENST00000618416 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
SPDYE12P-201ENST00000618416 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
SPDYE12P-201ENST00000618416 NUP160Q12769 1436 aa27.82■■■□□ 2.04
SPDYE12P-201ENST00000618416 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
SPDYE12P-201ENST00000618416 CUL7Q14999 1698 aa27.75■■■□□ 2.03
SPDYE12P-201ENST00000618416 IGF1RP08069 1367 aa27.72■■■□□ 2.03
SPDYE12P-201ENST00000618416 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
SPDYE12P-201ENST00000618416 SHROOM2Q13796 1616 aa27.66■■■□□ 2.02
SPDYE12P-201ENST00000618416 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
SPDYE12P-201ENST00000618416 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.01
SPDYE12P-201ENST00000618416 CARMIL1Q5VZK9 1371 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms