RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
MALAT1-213ENST00000618227 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
MALAT1-213ENST00000618227 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
MALAT1-213ENST00000618227 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
MALAT1-213ENST00000618227 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
MALAT1-213ENST00000618227 MT1EP04732 61 aa5.84□□□□□ -1.47
MALAT1-213ENST00000618227 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
MALAT1-213ENST00000618227 SPRR2EP22531 72 aa5.8□□□□□ -1.48
MALAT1-213ENST00000618227 SPRR2BP35325 72 aa5.8□□□□□ -1.48
MALAT1-213ENST00000618227 SPRR2AP35326 72 aa5.8□□□□□ -1.48
MALAT1-213ENST00000618227 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
MALAT1-213ENST00000618227 NEBP20929 6669 aa5.79□□□□□ -1.48
MALAT1-213ENST00000618227 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
MALAT1-213ENST00000618227 PRO0628Q9UI54 55 aa5.76□□□□□ -1.49
MALAT1-213ENST00000618227 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
MALAT1-213ENST00000618227 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
MALAT1-213ENST00000618227 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
MALAT1-213ENST00000618227 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
MALAT1-213ENST00000618227 MT1GP13640 62 aa5.65□□□□□ -1.5
MALAT1-213ENST00000618227 MT1LQ93083 61 aa5.65□□□□□ -1.5
MALAT1-213ENST00000618227 SPRR2DP22532 72 aa5.61□□□□□ -1.51
MALAT1-213ENST00000618227 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.6□□□□□ -1.51
MALAT1-213ENST00000618227 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
MALAT1-213ENST00000618227 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
MALAT1-213ENST00000618227 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
MALAT1-213ENST00000618227 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
MALAT1-213ENST00000618227 MT1MQ8N339 61 aa5.51□□□□□ -1.53
MALAT1-213ENST00000618227 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
MALAT1-213ENST00000618227 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
MALAT1-213ENST00000618227 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
MALAT1-213ENST00000618227 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
MALAT1-213ENST00000618227 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
MALAT1-213ENST00000618227 KRTAP5-11Q6L8G4 156 aa5.32□□□□□ -1.56
MALAT1-213ENST00000618227 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
MALAT1-213ENST00000618227 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
MALAT1-213ENST00000618227 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
MALAT1-213ENST00000618227 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
MALAT1-213ENST00000618227 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
MALAT1-213ENST00000618227 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
MALAT1-213ENST00000618227 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
MALAT1-213ENST00000618227 MT1AP04731 61 aa4.83□□□□□ -1.64
MALAT1-213ENST00000618227 MT4P47944 62 aa4.82□□□□□ -1.64
MALAT1-213ENST00000618227 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
MALAT1-213ENST00000618227 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
MALAT1-213ENST00000618227 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
MALAT1-213ENST00000618227 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
MALAT1-213ENST00000618227 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
MALAT1-213ENST00000618227 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
MALAT1-213ENST00000618227 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
MALAT1-213ENST00000618227 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
MALAT1-213ENST00000618227 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
MALAT1-213ENST00000618227 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
MALAT1-213ENST00000618227 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
MALAT1-213ENST00000618227 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
MALAT1-213ENST00000618227 MT3P25713 68 aa4.42□□□□□ -1.7
MALAT1-213ENST00000618227 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
MALAT1-213ENST00000618227 KRTAP5-10Q6L8G5 202 aa4.31□□□□□ -1.72
MALAT1-213ENST00000618227 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
MALAT1-213ENST00000618227 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
MALAT1-213ENST00000618227 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
MALAT1-213ENST00000618227 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
MALAT1-213ENST00000618227 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
MALAT1-213ENST00000618227 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
MALAT1-213ENST00000618227 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
MALAT1-213ENST00000618227 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
MALAT1-213ENST00000618227 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
MALAT1-213ENST00000618227 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
MALAT1-213ENST00000618227 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
MALAT1-213ENST00000618227 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
MALAT1-213ENST00000618227 INE1O15225 51 aa3.43□□□□□ -1.86
MALAT1-213ENST00000618227 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
MALAT1-213ENST00000618227 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
MALAT1-213ENST00000618227 PRM1P04553 51 aa3.06□□□□□ -1.92
MALAT1-213ENST00000618227 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
MALAT1-213ENST00000618227 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
MALAT1-213ENST00000618227 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
MALAT1-213ENST00000618227 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 79.5 ms