RNA–Protein interactions for RNA: ENST00000617777.1

LINC00598-208, long intergenic non-protein coding RNA 598, humanhuman

TSL 2 BASIC

Gene LINC00598, Length 2,551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-208ENST00000617777 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
LINC00598-208ENST00000617777 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
LINC00598-208ENST00000617777 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
LINC00598-208ENST00000617777 ABCC9O60706 1549 aa15.25■□□□□ 0.03
LINC00598-208ENST00000617777 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
LINC00598-208ENST00000617777 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
LINC00598-208ENST00000617777 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
LINC00598-208ENST00000617777 NACADO15069 1562 aa14.82□□□□□ -0.04
LINC00598-208ENST00000617777 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
LINC00598-208ENST00000617777 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
LINC00598-208ENST00000617777 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
LINC00598-208ENST00000617777 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
LINC00598-208ENST00000617777 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
LINC00598-208ENST00000617777 SUPT5HO00267 1087 aaKnown RBP14.4□□□□□ -0.1
LINC00598-208ENST00000617777 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
LINC00598-208ENST00000617777 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
LINC00598-208ENST00000617777 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
LINC00598-208ENST00000617777 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
LINC00598-208ENST00000617777 BAZ1AQ9NRL2 1556 aaPredicted RBP14.07□□□□□ -0.16
LINC00598-208ENST00000617777 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
LINC00598-208ENST00000617777 WIZO95785 1651 aa13.99□□□□□ -0.17
LINC00598-208ENST00000617777 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
LINC00598-208ENST00000617777 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
LINC00598-208ENST00000617777 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
LINC00598-208ENST00000617777 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
LINC00598-208ENST00000617777 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
LINC00598-208ENST00000617777 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.2
LINC00598-208ENST00000617777 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
LINC00598-208ENST00000617777 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
LINC00598-208ENST00000617777 NCAPD3P42695 1498 aa13.7□□□□□ -0.22
LINC00598-208ENST00000617777 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
LINC00598-208ENST00000617777 CHIC1Q5VXU3 224 aa13.64□□□□□ -0.23
LINC00598-208ENST00000617777 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
LINC00598-208ENST00000617777 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
LINC00598-208ENST00000617777 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
LINC00598-208ENST00000617777 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
LINC00598-208ENST00000617777 CFTRP13569 1480 aa13.38□□□□□ -0.27
LINC00598-208ENST00000617777 NESP48681 1621 aa13.34□□□□□ -0.27
LINC00598-208ENST00000617777 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
LINC00598-208ENST00000617777 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
LINC00598-208ENST00000617777 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
LINC00598-208ENST00000617777 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
LINC00598-208ENST00000617777 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
LINC00598-208ENST00000617777 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
LINC00598-208ENST00000617777 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
LINC00598-208ENST00000617777 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
LINC00598-208ENST00000617777 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
LINC00598-208ENST00000617777 CUX1P39880 1505 aa13.18□□□□□ -0.3
LINC00598-208ENST00000617777 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
LINC00598-208ENST00000617777 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
LINC00598-208ENST00000617777 SOGA1O94964 1423 aa13.16□□□□□ -0.3
LINC00598-208ENST00000617777 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
LINC00598-208ENST00000617777 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
LINC00598-208ENST00000617777 RUSC2Q8N2Y8 1516 aa13.11□□□□□ -0.31
LINC00598-208ENST00000617777 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
LINC00598-208ENST00000617777 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
LINC00598-208ENST00000617777 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
LINC00598-208ENST00000617777 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
LINC00598-208ENST00000617777 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
LINC00598-208ENST00000617777 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
LINC00598-208ENST00000617777 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
LINC00598-208ENST00000617777 EEA1Q15075 1411 aa13.01□□□□□ -0.33
LINC00598-208ENST00000617777 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
LINC00598-208ENST00000617777 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
LINC00598-208ENST00000617777 CUX2O14529 1486 aa13□□□□□ -0.33
LINC00598-208ENST00000617777 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
LINC00598-208ENST00000617777 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
LINC00598-208ENST00000617777 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
LINC00598-208ENST00000617777 WDR62O43379 1518 aa12.91□□□□□ -0.34
LINC00598-208ENST00000617777 ABCA10Q8WWZ4 1543 aa12.91□□□□□ -0.34
LINC00598-208ENST00000617777 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
LINC00598-208ENST00000617777 IGF1RP08069 1367 aa12.89□□□□□ -0.35
LINC00598-208ENST00000617777 RANGAP1P46060 587 aaPredicted RBP12.88□□□□□ -0.35
LINC00598-208ENST00000617777 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
LINC00598-208ENST00000617777 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
LINC00598-208ENST00000617777 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00598-208ENST00000617777 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
LINC00598-208ENST00000617777 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
LINC00598-208ENST00000617777 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
LINC00598-208ENST00000617777 KIF21BO75037 1637 aa12.84□□□□□ -0.35
LINC00598-208ENST00000617777 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
LINC00598-208ENST00000617777 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
LINC00598-208ENST00000617777 ZNF608Q9ULD9 1512 aaPredicted RBP12.82□□□□□ -0.36
LINC00598-208ENST00000617777 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
LINC00598-208ENST00000617777 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
LINC00598-208ENST00000617777 ABCA5Q8WWZ7 1642 aa12.79□□□□□ -0.36
LINC00598-208ENST00000617777 CEP162Q5TB80 1403 aa12.77□□□□□ -0.36
LINC00598-208ENST00000617777 ERICH3Q5RHP9 1530 aa12.77□□□□□ -0.37
LINC00598-208ENST00000617777 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
LINC00598-208ENST00000617777 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
LINC00598-208ENST00000617777 CUL7Q14999 1698 aa12.72□□□□□ -0.37
LINC00598-208ENST00000617777 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
LINC00598-208ENST00000617777 FBLN2P98095 1184 aa12.72□□□□□ -0.37
LINC00598-208ENST00000617777 CLIP1P30622 1438 aa12.7□□□□□ -0.38
LINC00598-208ENST00000617777 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
LINC00598-208ENST00000617777 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
LINC00598-208ENST00000617777 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
LINC00598-208ENST00000617777 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
LINC00598-208ENST00000617777 P3H3Q8IVL6 736 aa12.65□□□□□ -0.39
LINC00598-208ENST00000617777 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms