RNA–Protein interactions for RNA: ENST00000617712.1

AC242842.1-201, humanhuman

TSL 3 BASIC

Gene AC242842.1, Length 447 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC242842.1-201ENST00000617712 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
AC242842.1-201ENST00000617712 ABCC9O60706 1549 aa24.75■■□□□ 1.55
AC242842.1-201ENST00000617712 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
AC242842.1-201ENST00000617712 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
AC242842.1-201ENST00000617712 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
AC242842.1-201ENST00000617712 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
AC242842.1-201ENST00000617712 NACADO15069 1562 aa23.18■■□□□ 1.3
AC242842.1-201ENST00000617712 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
AC242842.1-201ENST00000617712 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
AC242842.1-201ENST00000617712 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
AC242842.1-201ENST00000617712 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
AC242842.1-201ENST00000617712 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
AC242842.1-201ENST00000617712 CECR2Q9BXF3 1484 aa22.36■■□□□ 1.17
AC242842.1-201ENST00000617712 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
AC242842.1-201ENST00000617712 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
AC242842.1-201ENST00000617712 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
AC242842.1-201ENST00000617712 SCRIBQ14160 1630 aa22.14■■□□□ 1.14
AC242842.1-201ENST00000617712 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
AC242842.1-201ENST00000617712 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
AC242842.1-201ENST00000617712 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
AC242842.1-201ENST00000617712 CUX2O14529 1486 aa21.49■■□□□ 1.03
AC242842.1-201ENST00000617712 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
AC242842.1-201ENST00000617712 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
AC242842.1-201ENST00000617712 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
AC242842.1-201ENST00000617712 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
AC242842.1-201ENST00000617712 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
AC242842.1-201ENST00000617712 NESP48681 1621 aa21.09■□□□□ 0.97
AC242842.1-201ENST00000617712 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
AC242842.1-201ENST00000617712 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
AC242842.1-201ENST00000617712 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
AC242842.1-201ENST00000617712 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
AC242842.1-201ENST00000617712 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
AC242842.1-201ENST00000617712 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
AC242842.1-201ENST00000617712 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
AC242842.1-201ENST00000617712 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
AC242842.1-201ENST00000617712 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
AC242842.1-201ENST00000617712 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
AC242842.1-201ENST00000617712 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
AC242842.1-201ENST00000617712 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
AC242842.1-201ENST00000617712 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
AC242842.1-201ENST00000617712 WDR62O43379 1518 aa20.58■□□□□ 0.88
AC242842.1-201ENST00000617712 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
AC242842.1-201ENST00000617712 WIZO95785 1651 aa20.46■□□□□ 0.87
AC242842.1-201ENST00000617712 CFTRP13569 1480 aa20.45■□□□□ 0.86
AC242842.1-201ENST00000617712 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
AC242842.1-201ENST00000617712 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
AC242842.1-201ENST00000617712 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
AC242842.1-201ENST00000617712 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
AC242842.1-201ENST00000617712 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
AC242842.1-201ENST00000617712 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
AC242842.1-201ENST00000617712 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
AC242842.1-201ENST00000617712 FBLN2P98095 1184 aa20.12■□□□□ 0.81
AC242842.1-201ENST00000617712 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
AC242842.1-201ENST00000617712 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
AC242842.1-201ENST00000617712 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
AC242842.1-201ENST00000617712 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
AC242842.1-201ENST00000617712 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
AC242842.1-201ENST00000617712 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
AC242842.1-201ENST00000617712 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
AC242842.1-201ENST00000617712 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
AC242842.1-201ENST00000617712 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
AC242842.1-201ENST00000617712 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
AC242842.1-201ENST00000617712 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
AC242842.1-201ENST00000617712 EIF4G3O43432 1585 aaKnown RBP19.9■□□□□ 0.78
AC242842.1-201ENST00000617712 SOGA1O94964 1423 aa19.88■□□□□ 0.77
AC242842.1-201ENST00000617712 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
AC242842.1-201ENST00000617712 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
AC242842.1-201ENST00000617712 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.76
AC242842.1-201ENST00000617712 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
AC242842.1-201ENST00000617712 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
AC242842.1-201ENST00000617712 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
AC242842.1-201ENST00000617712 CHD1O14646 1710 aa19.75■□□□□ 0.75
AC242842.1-201ENST00000617712 SNAPC4Q5SXM2 1469 aa19.71■□□□□ 0.75
AC242842.1-201ENST00000617712 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
AC242842.1-201ENST00000617712 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
AC242842.1-201ENST00000617712 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
AC242842.1-201ENST00000617712 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
AC242842.1-201ENST00000617712 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
AC242842.1-201ENST00000617712 SYNJ2O15056 1496 aa19.63■□□□□ 0.73
AC242842.1-201ENST00000617712 CLASP1Q7Z460 1538 aa19.59■□□□□ 0.73
AC242842.1-201ENST00000617712 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
AC242842.1-201ENST00000617712 CUX1P39880 1505 aa19.55■□□□□ 0.72
AC242842.1-201ENST00000617712 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
AC242842.1-201ENST00000617712 WRNQ14191 1432 aaPredicted RBP eCLIP19.43■□□□□ 0.7
AC242842.1-201ENST00000617712 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
AC242842.1-201ENST00000617712 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
AC242842.1-201ENST00000617712 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
AC242842.1-201ENST00000617712 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
AC242842.1-201ENST00000617712 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
AC242842.1-201ENST00000617712 JPH4Q96JJ6 628 aa19.32■□□□□ 0.68
AC242842.1-201ENST00000617712 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
AC242842.1-201ENST00000617712 NUP160Q12769 1436 aa19.31■□□□□ 0.68
AC242842.1-201ENST00000617712 CEP170Q5SW79 1584 aa19.26■□□□□ 0.67
AC242842.1-201ENST00000617712 FAM69CQ0P6D2 419 aa19.25■□□□□ 0.67
AC242842.1-201ENST00000617712 PRG4Q92954 1404 aaPredicted RBP19.25■□□□□ 0.67
AC242842.1-201ENST00000617712 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
AC242842.1-201ENST00000617712 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
AC242842.1-201ENST00000617712 ADAMTS12P58397 1594 aa19.2■□□□□ 0.66
AC242842.1-201ENST00000617712 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
AC242842.1-201ENST00000617712 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms