RNA–Protein interactions for RNA: ENST00000617346.4

RPL17-222, Transcript of ribosomal protein L17, humanhuman

TSL 5

Gene RPL17, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-222ENST00000617346 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
RPL17-222ENST00000617346 ABCC9O60706 1549 aa24.19■■□□□ 1.46
RPL17-222ENST00000617346 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.42
RPL17-222ENST00000617346 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
RPL17-222ENST00000617346 RB1CC1Q8TDY2 1594 aa22.82■■□□□ 1.24
RPL17-222ENST00000617346 NACADO15069 1562 aa22.64■■□□□ 1.22
RPL17-222ENST00000617346 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
RPL17-222ENST00000617346 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
RPL17-222ENST00000617346 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
RPL17-222ENST00000617346 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
RPL17-222ENST00000617346 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
RPL17-222ENST00000617346 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
RPL17-222ENST00000617346 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
RPL17-222ENST00000617346 SCRIBQ14160 1630 aa21.83■■□□□ 1.08
RPL17-222ENST00000617346 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.08
RPL17-222ENST00000617346 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
RPL17-222ENST00000617346 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
RPL17-222ENST00000617346 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
RPL17-222ENST00000617346 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.97
RPL17-222ENST00000617346 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
RPL17-222ENST00000617346 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
RPL17-222ENST00000617346 CUX2O14529 1486 aa20.84■□□□□ 0.93
RPL17-222ENST00000617346 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
RPL17-222ENST00000617346 NESP48681 1621 aa20.79■□□□□ 0.92
RPL17-222ENST00000617346 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
RPL17-222ENST00000617346 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
RPL17-222ENST00000617346 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
RPL17-222ENST00000617346 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
RPL17-222ENST00000617346 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
RPL17-222ENST00000617346 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
RPL17-222ENST00000617346 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
RPL17-222ENST00000617346 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
RPL17-222ENST00000617346 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
RPL17-222ENST00000617346 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
RPL17-222ENST00000617346 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
RPL17-222ENST00000617346 CADPSQ9ULU8 1353 aa20.31■□□□□ 0.84
RPL17-222ENST00000617346 WIZO95785 1651 aa20.29■□□□□ 0.84
RPL17-222ENST00000617346 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
RPL17-222ENST00000617346 WDR62O43379 1518 aa20.21■□□□□ 0.83
RPL17-222ENST00000617346 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
RPL17-222ENST00000617346 RSF1Q96T23 1441 aaPredicted RBP20.07■□□□□ 0.8
RPL17-222ENST00000617346 CFTRP13569 1480 aa20.06■□□□□ 0.8
RPL17-222ENST00000617346 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
RPL17-222ENST00000617346 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
RPL17-222ENST00000617346 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
RPL17-222ENST00000617346 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
RPL17-222ENST00000617346 OSCARQ8IYS5 282 aa19.83■□□□□ 0.77
RPL17-222ENST00000617346 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
RPL17-222ENST00000617346 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
RPL17-222ENST00000617346 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
RPL17-222ENST00000617346 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
RPL17-222ENST00000617346 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
RPL17-222ENST00000617346 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
RPL17-222ENST00000617346 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
RPL17-222ENST00000617346 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
RPL17-222ENST00000617346 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
RPL17-222ENST00000617346 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
RPL17-222ENST00000617346 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
RPL17-222ENST00000617346 AQRO60306 1485 aaKnown RBP eCLIP19.56■□□□□ 0.725e-7■■■■■ 34.9
RPL17-222ENST00000617346 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
RPL17-222ENST00000617346 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
RPL17-222ENST00000617346 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
RPL17-222ENST00000617346 CHD1O14646 1710 aa19.48■□□□□ 0.71
RPL17-222ENST00000617346 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
RPL17-222ENST00000617346 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
RPL17-222ENST00000617346 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
RPL17-222ENST00000617346 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
RPL17-222ENST00000617346 SOGA1O94964 1423 aa19.34■□□□□ 0.69
RPL17-222ENST00000617346 FBLN2P98095 1184 aa19.33■□□□□ 0.68
RPL17-222ENST00000617346 CUX1P39880 1505 aa19.33■□□□□ 0.68
RPL17-222ENST00000617346 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
RPL17-222ENST00000617346 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
RPL17-222ENST00000617346 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
RPL17-222ENST00000617346 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
RPL17-222ENST00000617346 MAGI1Q96QZ7 1491 aaPredicted RBP19.19■□□□□ 0.66
RPL17-222ENST00000617346 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
RPL17-222ENST00000617346 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
RPL17-222ENST00000617346 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
RPL17-222ENST00000617346 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
RPL17-222ENST00000617346 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
RPL17-222ENST00000617346 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
RPL17-222ENST00000617346 PBRM1Q86U86 1689 aa19.1■□□□□ 0.65
RPL17-222ENST00000617346 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
RPL17-222ENST00000617346 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
RPL17-222ENST00000617346 ERCC6L2Q5T890 1561 aa19.08■□□□□ 0.65
RPL17-222ENST00000617346 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
RPL17-222ENST00000617346 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
RPL17-222ENST00000617346 NUP160Q12769 1436 aa18.96■□□□□ 0.63
RPL17-222ENST00000617346 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
RPL17-222ENST00000617346 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
RPL17-222ENST00000617346 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
RPL17-222ENST00000617346 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
RPL17-222ENST00000617346 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.622e-6■■■□□ 19
RPL17-222ENST00000617346 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
RPL17-222ENST00000617346 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
RPL17-222ENST00000617346 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
RPL17-222ENST00000617346 KIF13AQ9H1H9 1805 aa18.74■□□□□ 0.59
RPL17-222ENST00000617346 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
RPL17-222ENST00000617346 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
RPL17-222ENST00000617346 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms