RNA–Protein interactions for RNA: ENST00000617250.1

RN7SL853P-201, Transcript of RNA, 7SL, cytoplasmic 853, pseudogene, humanhuman

BASIC

Gene RN7SL853P, Length 223 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL853P-201ENST00000617250 DNAJC5Q9H3Z4 198 aa8.9□□□□□ -0.98
RN7SL853P-201ENST00000617250 DNAJC5BQ9UF47 199 aa8.89□□□□□ -0.99
RN7SL853P-201ENST00000617250 ABCC9O60706 1549 aa8.29□□□□□ -1.08
RN7SL853P-201ENST00000617250 TRIM41Q8WV44 630 aa7.96□□□□□ -1.14
RN7SL853P-201ENST00000617250 ILDR1Q86SU0 546 aaPredicted RBP7.79□□□□□ -1.16
RN7SL853P-201ENST00000617250 AEBP2Q6ZN18 517 aaPredicted RBP7.77□□□□□ -1.17
RN7SL853P-201ENST00000617250 NISCHQ9Y2I1 1504 aa7.74□□□□□ -1.17
RN7SL853P-201ENST00000617250 PABPN1Q86U42 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
RN7SL853P-201ENST00000617250 CECR2Q9BXF3 1484 aa7.6□□□□□ -1.19
RN7SL853P-201ENST00000617250 CUX2O14529 1486 aa7.58□□□□□ -1.2
RN7SL853P-201ENST00000617250 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
RN7SL853P-201ENST00000617250 RB1CC1Q8TDY2 1594 aa7.37□□□□□ -1.23
RN7SL853P-201ENST00000617250 SOCS7O14512 581 aa7.3□□□□□ -1.24
RN7SL853P-201ENST00000617250 BICRAQ9NZM4 1560 aa7.28□□□□□ -1.24
RN7SL853P-201ENST00000617250 TRHP20396 242 aaPredicted RBP7.22□□□□□ -1.25
RN7SL853P-201ENST00000617250 LMTK3Q96Q04 1460 aa7.2□□□□□ -1.26
RN7SL853P-201ENST00000617250 ILDR2Q71H61 639 aa7.19□□□□□ -1.26
RN7SL853P-201ENST00000617250 ERCC6Q03468 1493 aa7.18□□□□□ -1.26
RN7SL853P-201ENST00000617250 CCDC180Q9P1Z9 1646 aa7.16□□□□□ -1.26
RN7SL853P-201ENST00000617250 EIF4G1Q04637 1599 aaKnown RBP7.15□□□□□ -1.27
RN7SL853P-201ENST00000617250 UNC13AQ9UPW8 1703 aa7.14□□□□□ -1.27
RN7SL853P-201ENST00000617250 OSCARQ8IYS5 282 aa7.12□□□□□ -1.27
RN7SL853P-201ENST00000617250 FBXO41Q8TF61 875 aa7.12□□□□□ -1.27
RN7SL853P-201ENST00000617250 NACADO15069 1562 aa7.1□□□□□ -1.27
RN7SL853P-201ENST00000617250 RIMBP3CA6NJZ7 1639 aa7.05□□□□□ -1.28
RN7SL853P-201ENST00000617250 RIMBP3BA6NNM3 1639 aa7.05□□□□□ -1.28
RN7SL853P-201ENST00000617250 RIMBP3Q9UFD9 1639 aa7.05□□□□□ -1.28
RN7SL853P-201ENST00000617250 SHROOM4Q9ULL8 1493 aa7.03□□□□□ -1.28
RN7SL853P-201ENST00000617250 CYB5RLQ6IPT4 315 aa7.02□□□□□ -1.29
RN7SL853P-201ENST00000617250 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
RN7SL853P-201ENST00000617250 ARHGEF11O15085 1522 aa6.95□□□□□ -1.3
RN7SL853P-201ENST00000617250 DISP3Q9P2K9 1392 aa6.94□□□□□ -1.3
RN7SL853P-201ENST00000617250 THOC2Q8NI27 1593 aaKnown RBP6.93□□□□□ -1.3
RN7SL853P-201ENST00000617250 BAZ1AQ9NRL2 1556 aaPredicted RBP6.91□□□□□ -1.3
RN7SL853P-201ENST00000617250 ERCC6L2Q5T890 1561 aa6.88□□□□□ -1.31
RN7SL853P-201ENST00000617250 DCAF8L2P0C7V8 631 aa6.87□□□□□ -1.31
RN7SL853P-201ENST00000617250 NESP48681 1621 aa6.85□□□□□ -1.31
RN7SL853P-201ENST00000617250 ARAP1Q96P48 1450 aa6.83□□□□□ -1.32
RN7SL853P-201ENST00000617250 HECW2Q9P2P5 1572 aa6.78□□□□□ -1.32
RN7SL853P-201ENST00000617250 SYNJ2O15056 1496 aa6.73□□□□□ -1.33
RN7SL853P-201ENST00000617250 SMARCA2P51531 1590 aa6.72□□□□□ -1.33
RN7SL853P-201ENST00000617250 MYO15BQ96JP2 1530 aa6.71□□□□□ -1.34
RN7SL853P-201ENST00000617250 SPATA31D1Q6ZQQ2 1576 aa6.65□□□□□ -1.34
RN7SL853P-201ENST00000617250 NCAPD3P42695 1498 aa6.65□□□□□ -1.35
RN7SL853P-201ENST00000617250 SCRIBQ14160 1630 aa6.61□□□□□ -1.35
RN7SL853P-201ENST00000617250 WDR62O43379 1518 aa6.61□□□□□ -1.35
RN7SL853P-201ENST00000617250 PDS5BQ9NTI5 1447 aa6.61□□□□□ -1.35
RN7SL853P-201ENST00000617250 KIF21AQ7Z4S6 1674 aa6.6□□□□□ -1.35
RN7SL853P-201ENST00000617250 MRC2Q9UBG0 1479 aa6.6□□□□□ -1.35
RN7SL853P-201ENST00000617250 RSF1Q96T23 1441 aaPredicted RBP6.59□□□□□ -1.35
RN7SL853P-201ENST00000617250 LAMC3Q9Y6N6 1575 aa6.56□□□□□ -1.36
RN7SL853P-201ENST00000617250 ADGRL1O94910 1474 aa6.54□□□□□ -1.36
RN7SL853P-201ENST00000617250 CERKQ8TCT0 537 aa6.53□□□□□ -1.36
RN7SL853P-201ENST00000617250 SRCAPQ6ZRS2 3230 aa6.47□□□□□ -1.37
RN7SL853P-201ENST00000617250 ATAD2BQ9ULI0 1458 aa6.46□□□□□ -1.38
RN7SL853P-201ENST00000617250 IFFO2Q5TF58 517 aa6.45□□□□□ -1.38
RN7SL853P-201ENST00000617250 KIF13AQ9H1H9 1805 aa6.41□□□□□ -1.38
RN7SL853P-201ENST00000617250 HMGXB3Q12766 1538 aa6.41□□□□□ -1.38
RN7SL853P-201ENST00000617250 ZNF608Q9ULD9 1512 aaPredicted RBP6.41□□□□□ -1.38
RN7SL853P-201ENST00000617250 KDM6BO15054 1643 aa6.39□□□□□ -1.39
RN7SL853P-201ENST00000617250 CADPSQ9ULU8 1353 aa6.39□□□□□ -1.39
RN7SL853P-201ENST00000617250 GAPVD1Q14C86 1478 aa6.37□□□□□ -1.39
RN7SL853P-201ENST00000617250 FAM69CQ0P6D2 419 aa6.37□□□□□ -1.39
RN7SL853P-201ENST00000617250 FBLN2P98095 1184 aa6.35□□□□□ -1.39
RN7SL853P-201ENST00000617250 CLASP1Q7Z460 1538 aa6.34□□□□□ -1.39
RN7SL853P-201ENST00000617250 CHD1O14646 1710 aa6.33□□□□□ -1.4
RN7SL853P-201ENST00000617250 CEP164Q9UPV0 1460 aa6.33□□□□□ -1.4
RN7SL853P-201ENST00000617250 SMARCA4P51532 1647 aa6.32□□□□□ -1.4
RN7SL853P-201ENST00000617250 ABCC10Q5T3U5 1492 aa6.32□□□□□ -1.4
RN7SL853P-201ENST00000617250 URB2Q14146 1524 aaKnown RBP6.3□□□□□ -1.4
RN7SL853P-201ENST00000617250 IFT140Q96RY7 1462 aa6.28□□□□□ -1.4
RN7SL853P-201ENST00000617250 FANCD2Q9BXW9 1451 aa6.27□□□□□ -1.41
RN7SL853P-201ENST00000617250 BAZ1BQ9UIG0 1483 aaKnown RBP6.26□□□□□ -1.41
RN7SL853P-201ENST00000617250 SNAPC4Q5SXM2 1469 aa6.25□□□□□ -1.41
RN7SL853P-201ENST00000617250 TOP2BQ02880 1626 aa6.23□□□□□ -1.41
RN7SL853P-201ENST00000617250 PCF11O94913 1555 aaKnown RBP6.23□□□□□ -1.41
RN7SL853P-201ENST00000617250 AQRO60306 1485 aaKnown RBP eCLIP6.22□□□□□ -1.41
RN7SL853P-201ENST00000617250 DCAF1Q9Y4B6 1507 aa6.22□□□□□ -1.41
RN7SL853P-201ENST00000617250 EIF4G3O43432 1585 aaKnown RBP6.22□□□□□ -1.41
RN7SL853P-201ENST00000617250 MED1Q15648 1581 aaPredicted RBP6.22□□□□□ -1.41
RN7SL853P-201ENST00000617250 COL17A1Q9UMD9 1497 aaPredicted RBP6.22□□□□□ -1.41
RN7SL853P-201ENST00000617250 HSPA2P54652 639 aa6.21□□□□□ -1.42
RN7SL853P-201ENST00000617250 DIP2BQ9P265 1576 aa6.21□□□□□ -1.42
RN7SL853P-201ENST00000617250 SYNJ1O43426 1573 aa6.18□□□□□ -1.42
RN7SL853P-201ENST00000617250 PTPRMP28827 1452 aa6.17□□□□□ -1.42
RN7SL853P-201ENST00000617250 CHMP7Q8WUX9 453 aaPredicted RBP6.16□□□□□ -1.42
RN7SL853P-201ENST00000617250 MAPKBP1O60336 1514 aa6.15□□□□□ -1.42
RN7SL853P-201ENST00000617250 PHF23Q9BUL5 403 aaPredicted RBP6.15□□□□□ -1.42
RN7SL853P-201ENST00000617250 RGS17Q9UGC6 210 aaPredicted RBP6.15□□□□□ -1.42
RN7SL853P-201ENST00000617250 TSPOAP1O95153 1857 aa6.13□□□□□ -1.43
RN7SL853P-201ENST00000617250 IQSEC2Q5JU85 1478 aa6.1□□□□□ -1.43
RN7SL853P-201ENST00000617250 PEG3Q9GZU2 1588 aa6.1□□□□□ -1.43
RN7SL853P-201ENST00000617250 SLC34A2O95436 690 aa6.09□□□□□ -1.43
RN7SL853P-201ENST00000617250 NPM1P06748 294 aaKnown RBP eCLIP6.09□□□□□ -1.43
RN7SL853P-201ENST00000617250 HSPA1LP34931 641 aa6.09□□□□□ -1.43
RN7SL853P-201ENST00000617250 CFTRP13569 1480 aa6.09□□□□□ -1.44
RN7SL853P-201ENST00000617250 LTBP4Q8N2S1 1624 aa6.07□□□□□ -1.44
RN7SL853P-201ENST00000617250 UBAP1LF5GYI3 381 aa6.06□□□□□ -1.44
RN7SL853P-201ENST00000617250 DMRT2Q9Y5R5 561 aa6.06□□□□□ -1.44
RN7SL853P-201ENST00000617250 ZCCHC6Q5VYS8 1495 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms