RNA–Protein interactions for RNA: ENST00000617244.1

AC040978.1-201, humanhuman

BASIC

Gene AC040978.1, Length 1,282 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040978.1-201ENST00000617244 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
AC040978.1-201ENST00000617244 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
AC040978.1-201ENST00000617244 ABCC9O60706 1549 aa16.31■□□□□ 0.2
AC040978.1-201ENST00000617244 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
AC040978.1-201ENST00000617244 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
AC040978.1-201ENST00000617244 NACADO15069 1562 aa15.8■□□□□ 0.12
AC040978.1-201ENST00000617244 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
AC040978.1-201ENST00000617244 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
AC040978.1-201ENST00000617244 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
AC040978.1-201ENST00000617244 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
AC040978.1-201ENST00000617244 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
AC040978.1-201ENST00000617244 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
AC040978.1-201ENST00000617244 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
AC040978.1-201ENST00000617244 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
AC040978.1-201ENST00000617244 HRCP23327 699 aa14.93□□□□□ -0.02
AC040978.1-201ENST00000617244 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
AC040978.1-201ENST00000617244 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
AC040978.1-201ENST00000617244 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
AC040978.1-201ENST00000617244 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
AC040978.1-201ENST00000617244 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
AC040978.1-201ENST00000617244 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
AC040978.1-201ENST00000617244 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
AC040978.1-201ENST00000617244 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
AC040978.1-201ENST00000617244 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
AC040978.1-201ENST00000617244 WIZO95785 1651 aa14.65□□□□□ -0.06
AC040978.1-201ENST00000617244 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
AC040978.1-201ENST00000617244 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
AC040978.1-201ENST00000617244 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
AC040978.1-201ENST00000617244 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
AC040978.1-201ENST00000617244 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
AC040978.1-201ENST00000617244 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
AC040978.1-201ENST00000617244 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
AC040978.1-201ENST00000617244 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
AC040978.1-201ENST00000617244 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
AC040978.1-201ENST00000617244 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
AC040978.1-201ENST00000617244 TRIM26Q12899 539 aaPredicted RBP14.47□□□□□ -0.09
AC040978.1-201ENST00000617244 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
AC040978.1-201ENST00000617244 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
AC040978.1-201ENST00000617244 NESP48681 1621 aa14.18□□□□□ -0.14
AC040978.1-201ENST00000617244 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
AC040978.1-201ENST00000617244 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
AC040978.1-201ENST00000617244 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
AC040978.1-201ENST00000617244 LOC105371045A0A1W2PR82 267 aa14.14□□□□□ -0.15
AC040978.1-201ENST00000617244 PPARGC1BQ86YN6 1023 aaKnown RBP14.12□□□□□ -0.15
AC040978.1-201ENST00000617244 CFTRP13569 1480 aa14.12□□□□□ -0.15
AC040978.1-201ENST00000617244 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
AC040978.1-201ENST00000617244 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
AC040978.1-201ENST00000617244 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
AC040978.1-201ENST00000617244 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
AC040978.1-201ENST00000617244 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
AC040978.1-201ENST00000617244 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
AC040978.1-201ENST00000617244 MYT1Q01538 1121 aa13.98□□□□□ -0.17
AC040978.1-201ENST00000617244 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
AC040978.1-201ENST00000617244 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
AC040978.1-201ENST00000617244 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
AC040978.1-201ENST00000617244 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
AC040978.1-201ENST00000617244 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
AC040978.1-201ENST00000617244 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
AC040978.1-201ENST00000617244 WDR62O43379 1518 aa13.84□□□□□ -0.19
AC040978.1-201ENST00000617244 CUX1P39880 1505 aa13.83□□□□□ -0.2
AC040978.1-201ENST00000617244 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
AC040978.1-201ENST00000617244 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
AC040978.1-201ENST00000617244 EEA1Q15075 1411 aa13.82□□□□□ -0.2
AC040978.1-201ENST00000617244 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
AC040978.1-201ENST00000617244 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
AC040978.1-201ENST00000617244 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
AC040978.1-201ENST00000617244 CENPBP07199 599 aaPredicted RBP13.76□□□□□ -0.21
AC040978.1-201ENST00000617244 CUX2O14529 1486 aa13.74□□□□□ -0.21
AC040978.1-201ENST00000617244 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
AC040978.1-201ENST00000617244 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
AC040978.1-201ENST00000617244 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
AC040978.1-201ENST00000617244 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
AC040978.1-201ENST00000617244 SOGA1O94964 1423 aa13.69□□□□□ -0.22
AC040978.1-201ENST00000617244 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
AC040978.1-201ENST00000617244 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
AC040978.1-201ENST00000617244 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
AC040978.1-201ENST00000617244 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
AC040978.1-201ENST00000617244 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
AC040978.1-201ENST00000617244 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
AC040978.1-201ENST00000617244 WDR97A6NE52 1622 aa13.63□□□□□ -0.23
AC040978.1-201ENST00000617244 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
AC040978.1-201ENST00000617244 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
AC040978.1-201ENST00000617244 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
AC040978.1-201ENST00000617244 GOLGA3Q08378 1498 aa13.52□□□□□ -0.25
AC040978.1-201ENST00000617244 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
AC040978.1-201ENST00000617244 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
AC040978.1-201ENST00000617244 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
AC040978.1-201ENST00000617244 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
AC040978.1-201ENST00000617244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
AC040978.1-201ENST00000617244 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
AC040978.1-201ENST00000617244 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms