RNA–Protein interactions for RNA: ENST00000617244.1

AC040978.1-201, humanhuman

BASIC

Gene AC040978.1, Length 1,282 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040978.1-201ENST00000617244 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
AC040978.1-201ENST00000617244 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
AC040978.1-201ENST00000617244 ABCC9O60706 1549 aa16.31■□□□□ 0.2
AC040978.1-201ENST00000617244 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
AC040978.1-201ENST00000617244 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
AC040978.1-201ENST00000617244 NACADO15069 1562 aa15.8■□□□□ 0.12
AC040978.1-201ENST00000617244 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
AC040978.1-201ENST00000617244 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
AC040978.1-201ENST00000617244 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
AC040978.1-201ENST00000617244 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
AC040978.1-201ENST00000617244 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
AC040978.1-201ENST00000617244 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
AC040978.1-201ENST00000617244 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
AC040978.1-201ENST00000617244 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
AC040978.1-201ENST00000617244 HRCP23327 699 aa14.93□□□□□ -0.02
AC040978.1-201ENST00000617244 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
AC040978.1-201ENST00000617244 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
AC040978.1-201ENST00000617244 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
AC040978.1-201ENST00000617244 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
AC040978.1-201ENST00000617244 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
AC040978.1-201ENST00000617244 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
AC040978.1-201ENST00000617244 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
AC040978.1-201ENST00000617244 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
AC040978.1-201ENST00000617244 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
AC040978.1-201ENST00000617244 WIZO95785 1651 aa14.65□□□□□ -0.06
AC040978.1-201ENST00000617244 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
AC040978.1-201ENST00000617244 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
AC040978.1-201ENST00000617244 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
AC040978.1-201ENST00000617244 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
AC040978.1-201ENST00000617244 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
AC040978.1-201ENST00000617244 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
AC040978.1-201ENST00000617244 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
AC040978.1-201ENST00000617244 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
AC040978.1-201ENST00000617244 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
AC040978.1-201ENST00000617244 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
AC040978.1-201ENST00000617244 TRIM26Q12899 539 aaPredicted RBP14.47□□□□□ -0.09
AC040978.1-201ENST00000617244 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
AC040978.1-201ENST00000617244 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
AC040978.1-201ENST00000617244 NESP48681 1621 aa14.18□□□□□ -0.14
AC040978.1-201ENST00000617244 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
AC040978.1-201ENST00000617244 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
AC040978.1-201ENST00000617244 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
AC040978.1-201ENST00000617244 LOC105371045A0A1W2PR82 267 aa14.14□□□□□ -0.15
AC040978.1-201ENST00000617244 PPARGC1BQ86YN6 1023 aaKnown RBP14.12□□□□□ -0.15
AC040978.1-201ENST00000617244 CFTRP13569 1480 aa14.12□□□□□ -0.15
AC040978.1-201ENST00000617244 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
AC040978.1-201ENST00000617244 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
AC040978.1-201ENST00000617244 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
AC040978.1-201ENST00000617244 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
AC040978.1-201ENST00000617244 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
AC040978.1-201ENST00000617244 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
AC040978.1-201ENST00000617244 MYT1Q01538 1121 aa13.98□□□□□ -0.17
AC040978.1-201ENST00000617244 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
AC040978.1-201ENST00000617244 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
AC040978.1-201ENST00000617244 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
AC040978.1-201ENST00000617244 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
AC040978.1-201ENST00000617244 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
AC040978.1-201ENST00000617244 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
AC040978.1-201ENST00000617244 WDR62O43379 1518 aa13.84□□□□□ -0.19
AC040978.1-201ENST00000617244 CUX1P39880 1505 aa13.83□□□□□ -0.2
AC040978.1-201ENST00000617244 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
AC040978.1-201ENST00000617244 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
AC040978.1-201ENST00000617244 EEA1Q15075 1411 aa13.82□□□□□ -0.2
AC040978.1-201ENST00000617244 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
AC040978.1-201ENST00000617244 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
AC040978.1-201ENST00000617244 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
AC040978.1-201ENST00000617244 CENPBP07199 599 aaPredicted RBP13.76□□□□□ -0.21
AC040978.1-201ENST00000617244 CUX2O14529 1486 aa13.74□□□□□ -0.21
AC040978.1-201ENST00000617244 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
AC040978.1-201ENST00000617244 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
AC040978.1-201ENST00000617244 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
AC040978.1-201ENST00000617244 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
AC040978.1-201ENST00000617244 SOGA1O94964 1423 aa13.69□□□□□ -0.22
AC040978.1-201ENST00000617244 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
AC040978.1-201ENST00000617244 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
AC040978.1-201ENST00000617244 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
AC040978.1-201ENST00000617244 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
AC040978.1-201ENST00000617244 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
AC040978.1-201ENST00000617244 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
AC040978.1-201ENST00000617244 WDR97A6NE52 1622 aa13.63□□□□□ -0.23
AC040978.1-201ENST00000617244 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
AC040978.1-201ENST00000617244 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
AC040978.1-201ENST00000617244 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
AC040978.1-201ENST00000617244 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
AC040978.1-201ENST00000617244 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
AC040978.1-201ENST00000617244 GOLGA3Q08378 1498 aa13.52□□□□□ -0.25
AC040978.1-201ENST00000617244 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
AC040978.1-201ENST00000617244 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
AC040978.1-201ENST00000617244 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
AC040978.1-201ENST00000617244 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
AC040978.1-201ENST00000617244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
AC040978.1-201ENST00000617244 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
AC040978.1-201ENST00000617244 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms