RNA–Protein interactions for RNA: ENST00000616014.3

CLPS-202, Transcript of colipase, humanhuman

TSL 1 (best) BASIC

Gene CLPS, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPS-202ENST00000616014 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
CLPS-202ENST00000616014 ABCC9O60706 1549 aa15.36■□□□□ 0.05
CLPS-202ENST00000616014 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
CLPS-202ENST00000616014 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
CLPS-202ENST00000616014 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
CLPS-202ENST00000616014 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLPS-202ENST00000616014 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
CLPS-202ENST00000616014 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
CLPS-202ENST00000616014 NACADO15069 1562 aa13.96□□□□□ -0.18
CLPS-202ENST00000616014 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
CLPS-202ENST00000616014 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
CLPS-202ENST00000616014 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
CLPS-202ENST00000616014 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
CLPS-202ENST00000616014 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
CLPS-202ENST00000616014 SHROOM4Q9ULL8 1493 aa13.58□□□□□ -0.24
CLPS-202ENST00000616014 CUX2O14529 1486 aa13.57□□□□□ -0.24
CLPS-202ENST00000616014 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
CLPS-202ENST00000616014 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
CLPS-202ENST00000616014 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
CLPS-202ENST00000616014 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
CLPS-202ENST00000616014 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
CLPS-202ENST00000616014 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
CLPS-202ENST00000616014 OSCARQ8IYS5 282 aa13□□□□□ -0.33
CLPS-202ENST00000616014 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
CLPS-202ENST00000616014 NESP48681 1621 aa12.91□□□□□ -0.34
CLPS-202ENST00000616014 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
CLPS-202ENST00000616014 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
CLPS-202ENST00000616014 THOC2Q8NI27 1593 aaKnown RBP12.83□□□□□ -0.36
CLPS-202ENST00000616014 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
CLPS-202ENST00000616014 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
CLPS-202ENST00000616014 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
CLPS-202ENST00000616014 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
CLPS-202ENST00000616014 BAZ1AQ9NRL2 1556 aaPredicted RBP12.72□□□□□ -0.37
CLPS-202ENST00000616014 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
CLPS-202ENST00000616014 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
CLPS-202ENST00000616014 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
CLPS-202ENST00000616014 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
CLPS-202ENST00000616014 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
CLPS-202ENST00000616014 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
CLPS-202ENST00000616014 BAZ1BQ9UIG0 1483 aaKnown RBP12.61□□□□□ -0.39
CLPS-202ENST00000616014 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
CLPS-202ENST00000616014 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
CLPS-202ENST00000616014 ARHGEF11O15085 1522 aa12.57□□□□□ -0.4
CLPS-202ENST00000616014 WDR62O43379 1518 aa12.57□□□□□ -0.4
CLPS-202ENST00000616014 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
CLPS-202ENST00000616014 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
CLPS-202ENST00000616014 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
CLPS-202ENST00000616014 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
CLPS-202ENST00000616014 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
CLPS-202ENST00000616014 FBLN2P98095 1184 aa12.35□□□□□ -0.43
CLPS-202ENST00000616014 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CLPS-202ENST00000616014 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
CLPS-202ENST00000616014 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
CLPS-202ENST00000616014 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
CLPS-202ENST00000616014 ZNF608Q9ULD9 1512 aaPredicted RBP12.24□□□□□ -0.45
CLPS-202ENST00000616014 CFTRP13569 1480 aa12.18□□□□□ -0.46
CLPS-202ENST00000616014 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
CLPS-202ENST00000616014 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
CLPS-202ENST00000616014 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
CLPS-202ENST00000616014 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLPS-202ENST00000616014 FBXO41Q8TF61 875 aa12.07□□□□□ -0.48
CLPS-202ENST00000616014 CHD1O14646 1710 aa12.05□□□□□ -0.48
CLPS-202ENST00000616014 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
CLPS-202ENST00000616014 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
CLPS-202ENST00000616014 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
CLPS-202ENST00000616014 TOPBP1Q92547 1522 aa12□□□□□ -0.49
CLPS-202ENST00000616014 SYNJ1O43426 1573 aa11.97□□□□□ -0.49
CLPS-202ENST00000616014 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
CLPS-202ENST00000616014 FAM69CQ0P6D2 419 aa11.96□□□□□ -0.49
CLPS-202ENST00000616014 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
CLPS-202ENST00000616014 LMTK3Q96Q04 1460 aa11.94□□□□□ -0.5
CLPS-202ENST00000616014 WIZO95785 1651 aa11.92□□□□□ -0.5
CLPS-202ENST00000616014 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLPS-202ENST00000616014 SOCS7O14512 581 aa11.91□□□□□ -0.5
CLPS-202ENST00000616014 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
CLPS-202ENST00000616014 ERCC6L2Q5T890 1561 aa11.9□□□□□ -0.5
CLPS-202ENST00000616014 SOGA1O94964 1423 aa11.87□□□□□ -0.51
CLPS-202ENST00000616014 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
CLPS-202ENST00000616014 MAGI1Q96QZ7 1491 aaPredicted RBP11.86□□□□□ -0.51
CLPS-202ENST00000616014 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
CLPS-202ENST00000616014 SYNJ2O15056 1496 aa11.84□□□□□ -0.51
CLPS-202ENST00000616014 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
CLPS-202ENST00000616014 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
CLPS-202ENST00000616014 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
CLPS-202ENST00000616014 HECW2Q9P2P5 1572 aa11.81□□□□□ -0.52
CLPS-202ENST00000616014 KDM6BO15054 1643 aa11.79□□□□□ -0.52
CLPS-202ENST00000616014 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
CLPS-202ENST00000616014 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
CLPS-202ENST00000616014 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
CLPS-202ENST00000616014 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
CLPS-202ENST00000616014 DISP3Q9P2K9 1392 aa11.76□□□□□ -0.53
CLPS-202ENST00000616014 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
CLPS-202ENST00000616014 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
CLPS-202ENST00000616014 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
CLPS-202ENST00000616014 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
CLPS-202ENST00000616014 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
CLPS-202ENST00000616014 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
CLPS-202ENST00000616014 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
CLPS-202ENST00000616014 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
CLPS-202ENST00000616014 MAPKBP1O60336 1514 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms