RNA–Protein interactions for RNA: ENST00000615479.4

RPL17-220, Transcript of ribosomal protein L17, humanhuman

TSL 5

Gene RPL17, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-220ENST00000615479 NISCHQ9Y2I1 1504 aa28.3■■■□□ 2.12
RPL17-220ENST00000615479 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
RPL17-220ENST00000615479 ABCC9O60706 1549 aa24.3■■□□□ 1.48
RPL17-220ENST00000615479 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
RPL17-220ENST00000615479 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
RPL17-220ENST00000615479 NACADO15069 1562 aa23.4■■□□□ 1.34
RPL17-220ENST00000615479 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
RPL17-220ENST00000615479 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
RPL17-220ENST00000615479 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
RPL17-220ENST00000615479 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
RPL17-220ENST00000615479 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
RPL17-220ENST00000615479 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
RPL17-220ENST00000615479 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
RPL17-220ENST00000615479 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
RPL17-220ENST00000615479 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
RPL17-220ENST00000615479 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
RPL17-220ENST00000615479 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
RPL17-220ENST00000615479 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
RPL17-220ENST00000615479 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
RPL17-220ENST00000615479 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
RPL17-220ENST00000615479 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
RPL17-220ENST00000615479 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
RPL17-220ENST00000615479 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
RPL17-220ENST00000615479 WIZO95785 1651 aa21.69■■□□□ 1.06
RPL17-220ENST00000615479 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
RPL17-220ENST00000615479 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
RPL17-220ENST00000615479 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
RPL17-220ENST00000615479 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
RPL17-220ENST00000615479 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
RPL17-220ENST00000615479 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
RPL17-220ENST00000615479 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
RPL17-220ENST00000615479 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
RPL17-220ENST00000615479 NESP48681 1621 aa21.15■□□□□ 0.98
RPL17-220ENST00000615479 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
RPL17-220ENST00000615479 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
RPL17-220ENST00000615479 CFTRP13569 1480 aa20.94■□□□□ 0.94
RPL17-220ENST00000615479 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
RPL17-220ENST00000615479 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
RPL17-220ENST00000615479 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
RPL17-220ENST00000615479 PDS5BQ9NTI5 1447 aa20.81■□□□□ 0.92
RPL17-220ENST00000615479 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
RPL17-220ENST00000615479 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
RPL17-220ENST00000615479 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
RPL17-220ENST00000615479 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
RPL17-220ENST00000615479 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
RPL17-220ENST00000615479 WDR62O43379 1518 aa20.58■□□□□ 0.88
RPL17-220ENST00000615479 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
RPL17-220ENST00000615479 CUX1P39880 1505 aa20.52■□□□□ 0.87
RPL17-220ENST00000615479 TOPBP1Q92547 1522 aa20.52■□□□□ 0.87
RPL17-220ENST00000615479 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
RPL17-220ENST00000615479 CUX2O14529 1486 aa20.47■□□□□ 0.87
RPL17-220ENST00000615479 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
RPL17-220ENST00000615479 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.865e-6■■■■■ 29.2
RPL17-220ENST00000615479 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
RPL17-220ENST00000615479 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
RPL17-220ENST00000615479 BIVM-ERCC5R4GMW8 1640 aa20.36■□□□□ 0.85
RPL17-220ENST00000615479 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
RPL17-220ENST00000615479 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
RPL17-220ENST00000615479 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
RPL17-220ENST00000615479 IFT140Q96RY7 1462 aa20.26■□□□□ 0.83
RPL17-220ENST00000615479 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
RPL17-220ENST00000615479 SOGA1O94964 1423 aa20.26■□□□□ 0.83
RPL17-220ENST00000615479 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
RPL17-220ENST00000615479 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
RPL17-220ENST00000615479 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
RPL17-220ENST00000615479 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.827e-7■■■■□ 21.8
RPL17-220ENST00000615479 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
RPL17-220ENST00000615479 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
RPL17-220ENST00000615479 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
RPL17-220ENST00000615479 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.8
RPL17-220ENST00000615479 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
RPL17-220ENST00000615479 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
RPL17-220ENST00000615479 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
RPL17-220ENST00000615479 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
RPL17-220ENST00000615479 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
RPL17-220ENST00000615479 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
RPL17-220ENST00000615479 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
RPL17-220ENST00000615479 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
RPL17-220ENST00000615479 CHD1O14646 1710 aa19.87■□□□□ 0.77
RPL17-220ENST00000615479 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
RPL17-220ENST00000615479 IGF1RP08069 1367 aa19.85■□□□□ 0.77
RPL17-220ENST00000615479 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
RPL17-220ENST00000615479 FBLN2P98095 1184 aa19.83■□□□□ 0.77
RPL17-220ENST00000615479 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
RPL17-220ENST00000615479 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
RPL17-220ENST00000615479 CUL7Q14999 1698 aa19.77■□□□□ 0.76
RPL17-220ENST00000615479 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
RPL17-220ENST00000615479 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
RPL17-220ENST00000615479 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
RPL17-220ENST00000615479 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
RPL17-220ENST00000615479 EEA1Q15075 1411 aa19.69■□□□□ 0.74
RPL17-220ENST00000615479 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
RPL17-220ENST00000615479 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
RPL17-220ENST00000615479 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
RPL17-220ENST00000615479 OSCARQ8IYS5 282 aa19.65■□□□□ 0.74
RPL17-220ENST00000615479 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
RPL17-220ENST00000615479 NUP160Q12769 1436 aa19.63■□□□□ 0.73
RPL17-220ENST00000615479 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
RPL17-220ENST00000615479 KIF21BO75037 1637 aa19.56■□□□□ 0.72
RPL17-220ENST00000615479 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms