RNA–Protein interactions for RNA: ENST00000615471.4

SMIM22-210, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SMIM22, Length 928 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-210ENST00000615471 NISCHQ9Y2I1 1504 aa42.05■■■■■ 4.32
SMIM22-210ENST00000615471 CCDC180Q9P1Z9 1646 aa37.49■■■■□ 3.59
SMIM22-210ENST00000615471 ABCC9O60706 1549 aa36.78■■■■□ 3.48
SMIM22-210ENST00000615471 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
SMIM22-210ENST00000615471 NACADO15069 1562 aa35.29■■■■□ 3.24
SMIM22-210ENST00000615471 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
SMIM22-210ENST00000615471 MYO15BQ96JP2 1530 aa35.09■■■■□ 3.21
SMIM22-210ENST00000615471 ZCCHC6Q5VYS8 1495 aaKnown RBP35.04■■■■□ 3.2
SMIM22-210ENST00000615471 DCAF1Q9Y4B6 1507 aa34.85■■■■□ 3.17
SMIM22-210ENST00000615471 UNC13AQ9UPW8 1703 aa34.54■■■■□ 3.12
SMIM22-210ENST00000615471 BICRAQ9NZM4 1560 aa34.33■■■■□ 3.09
SMIM22-210ENST00000615471 PABPN1Q86U42 306 aaKnown RBP eCLIP34.3■■■■□ 3.08
SMIM22-210ENST00000615471 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
SMIM22-210ENST00000615471 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
SMIM22-210ENST00000615471 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
SMIM22-210ENST00000615471 EIF4G1Q04637 1599 aaKnown RBP33.41■■■□□ 2.94
SMIM22-210ENST00000615471 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
SMIM22-210ENST00000615471 CECR2Q9BXF3 1484 aa33.1■■■□□ 2.89
SMIM22-210ENST00000615471 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
SMIM22-210ENST00000615471 BAZ1AQ9NRL2 1556 aaPredicted RBP32.59■■■□□ 2.81
SMIM22-210ENST00000615471 NCAPD3P42695 1498 aa32.59■■■□□ 2.81
SMIM22-210ENST00000615471 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
SMIM22-210ENST00000615471 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
SMIM22-210ENST00000615471 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
SMIM22-210ENST00000615471 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
SMIM22-210ENST00000615471 MROH2BQ7Z745 1585 aa32.39■■■□□ 2.78
SMIM22-210ENST00000615471 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
SMIM22-210ENST00000615471 WIZO95785 1651 aa32.03■■■□□ 2.72
SMIM22-210ENST00000615471 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
SMIM22-210ENST00000615471 NESP48681 1621 aa31.78■■■□□ 2.68
SMIM22-210ENST00000615471 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
SMIM22-210ENST00000615471 TOP2AP11388 1531 aaKnown RBP31.73■■■□□ 2.67
SMIM22-210ENST00000615471 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
SMIM22-210ENST00000615471 CADPSQ9ULU8 1353 aa31.59■■■□□ 2.65
SMIM22-210ENST00000615471 CUX2O14529 1486 aa31.52■■■□□ 2.64
SMIM22-210ENST00000615471 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
SMIM22-210ENST00000615471 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
SMIM22-210ENST00000615471 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
SMIM22-210ENST00000615471 CFTRP13569 1480 aa31.39■■■□□ 2.62
SMIM22-210ENST00000615471 CCDC88BA6NC98 1476 aa31.3■■■□□ 2.6
SMIM22-210ENST00000615471 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.58
SMIM22-210ENST00000615471 MRC2Q9UBG0 1479 aa31.19■■■□□ 2.58
SMIM22-210ENST00000615471 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
SMIM22-210ENST00000615471 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
SMIM22-210ENST00000615471 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
SMIM22-210ENST00000615471 WDR62O43379 1518 aa31.12■■■□□ 2.57
SMIM22-210ENST00000615471 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
SMIM22-210ENST00000615471 DNAJC5Q9H3Z4 198 aa30.77■■■□□ 2.52
SMIM22-210ENST00000615471 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
SMIM22-210ENST00000615471 ABCC8Q09428 1581 aa30.7■■■□□ 2.5
SMIM22-210ENST00000615471 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
SMIM22-210ENST00000615471 IFT140Q96RY7 1462 aa30.56■■■□□ 2.48
SMIM22-210ENST00000615471 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
SMIM22-210ENST00000615471 ZNF608Q9ULD9 1512 aaPredicted RBP30.41■■■□□ 2.46
SMIM22-210ENST00000615471 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
SMIM22-210ENST00000615471 CUX1P39880 1505 aa30.39■■■□□ 2.46
SMIM22-210ENST00000615471 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
SMIM22-210ENST00000615471 EIF4G3O43432 1585 aaKnown RBP30.28■■■□□ 2.44
SMIM22-210ENST00000615471 SOGA1O94964 1423 aa30.27■■■□□ 2.44
SMIM22-210ENST00000615471 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.44
SMIM22-210ENST00000615471 AQRO60306 1485 aaKnown RBP eCLIP30.2■■■□□ 2.43
SMIM22-210ENST00000615471 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
SMIM22-210ENST00000615471 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
SMIM22-210ENST00000615471 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
SMIM22-210ENST00000615471 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
SMIM22-210ENST00000615471 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
SMIM22-210ENST00000615471 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
SMIM22-210ENST00000615471 TDRD9Q8NDG6 1382 aaKnown RBP30.1■■■□□ 2.41
SMIM22-210ENST00000615471 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
SMIM22-210ENST00000615471 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
SMIM22-210ENST00000615471 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
SMIM22-210ENST00000615471 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
SMIM22-210ENST00000615471 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
SMIM22-210ENST00000615471 CHD1O14646 1710 aa29.92■■■□□ 2.38
SMIM22-210ENST00000615471 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
SMIM22-210ENST00000615471 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
SMIM22-210ENST00000615471 SYNJ2O15056 1496 aa29.79■■■□□ 2.36
SMIM22-210ENST00000615471 FBLN2P98095 1184 aa29.78■■■□□ 2.36
SMIM22-210ENST00000615471 CHMP7Q8WUX9 453 aaPredicted RBP29.73■■■□□ 2.35
SMIM22-210ENST00000615471 RIMBP3CA6NJZ7 1639 aa29.68■■■□□ 2.34
SMIM22-210ENST00000615471 RIMBP3BA6NNM3 1639 aa29.68■■■□□ 2.34
SMIM22-210ENST00000615471 RIMBP3Q9UFD9 1639 aa29.68■■■□□ 2.34
SMIM22-210ENST00000615471 ERICH3Q5RHP9 1530 aa29.67■■■□□ 2.34
SMIM22-210ENST00000615471 ARHGEF11O15085 1522 aa29.66■■■□□ 2.34
SMIM22-210ENST00000615471 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
SMIM22-210ENST00000615471 ADAMTS12P58397 1594 aa29.64■■■□□ 2.34
SMIM22-210ENST00000615471 FHAD1B1AJZ9 1412 aa29.59■■■□□ 2.33
SMIM22-210ENST00000615471 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
SMIM22-210ENST00000615471 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
SMIM22-210ENST00000615471 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
SMIM22-210ENST00000615471 NUP160Q12769 1436 aa29.49■■■□□ 2.31
SMIM22-210ENST00000615471 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
SMIM22-210ENST00000615471 IGF1RP08069 1367 aa29.43■■■□□ 2.3
SMIM22-210ENST00000615471 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
SMIM22-210ENST00000615471 CUL7Q14999 1698 aa29.41■■■□□ 2.3
SMIM22-210ENST00000615471 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
SMIM22-210ENST00000615471 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
SMIM22-210ENST00000615471 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.27
SMIM22-210ENST00000615471 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
SMIM22-210ENST00000615471 ERCC6L2Q5T890 1561 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms