RNA–Protein interactions for RNA: ENST00000615342.4

CFC1-202, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

TSL 5 BASIC

Gene CFC1, Length 1,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-202ENST00000615342 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
CFC1-202ENST00000615342 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
CFC1-202ENST00000615342 ABCC9O60706 1549 aa37.07■■■■□ 3.52
CFC1-202ENST00000615342 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
CFC1-202ENST00000615342 NACADO15069 1562 aa35.33■■■■□ 3.25
CFC1-202ENST00000615342 DCAF8L2P0C7V8 631 aa35.3■■■■□ 3.24
CFC1-202ENST00000615342 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
CFC1-202ENST00000615342 ZCCHC6Q5VYS8 1495 aaKnown RBP34.92■■■■□ 3.18
CFC1-202ENST00000615342 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
CFC1-202ENST00000615342 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
CFC1-202ENST00000615342 PABPN1Q86U42 306 aaKnown RBP eCLIP34.57■■■■□ 3.13
CFC1-202ENST00000615342 BICRAQ9NZM4 1560 aa34.41■■■■□ 3.1
CFC1-202ENST00000615342 DNAJC5BQ9UF47 199 aa34.31■■■■□ 3.08
CFC1-202ENST00000615342 SCRIBQ14160 1630 aa34.24■■■■□ 3.07
CFC1-202ENST00000615342 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
CFC1-202ENST00000615342 EIF4G1Q04637 1599 aaKnown RBP33.54■■■□□ 2.96
CFC1-202ENST00000615342 CC2D2AQ9P2K1 1620 aa33.5■■■□□ 2.95
CFC1-202ENST00000615342 CECR2Q9BXF3 1484 aa33.33■■■□□ 2.93
CFC1-202ENST00000615342 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
CFC1-202ENST00000615342 NCAPD3P42695 1498 aa32.59■■■□□ 2.81
CFC1-202ENST00000615342 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
CFC1-202ENST00000615342 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.81
CFC1-202ENST00000615342 SMARCA2P51531 1590 aa32.52■■■□□ 2.8
CFC1-202ENST00000615342 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
CFC1-202ENST00000615342 MROH2BQ7Z745 1585 aa32.39■■■□□ 2.78
CFC1-202ENST00000615342 PEG3Q9GZU2 1588 aa32.33■■■□□ 2.77
CFC1-202ENST00000615342 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
CFC1-202ENST00000615342 WIZO95785 1651 aa32.04■■■□□ 2.72
CFC1-202ENST00000615342 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
CFC1-202ENST00000615342 NESP48681 1621 aa31.97■■■□□ 2.71
CFC1-202ENST00000615342 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
CFC1-202ENST00000615342 LAMC3Q9Y6N6 1575 aa31.81■■■□□ 2.68
CFC1-202ENST00000615342 CUX2O14529 1486 aa31.73■■■□□ 2.67
CFC1-202ENST00000615342 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
CFC1-202ENST00000615342 CADPSQ9ULU8 1353 aa31.63■■■□□ 2.65
CFC1-202ENST00000615342 KIF21AQ7Z4S6 1674 aa31.61■■■□□ 2.65
CFC1-202ENST00000615342 PDS5BQ9NTI5 1447 aa31.6■■■□□ 2.65
CFC1-202ENST00000615342 THOC2Q8NI27 1593 aaKnown RBP31.55■■■□□ 2.64
CFC1-202ENST00000615342 CFTRP13569 1480 aa31.37■■■□□ 2.61
CFC1-202ENST00000615342 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
CFC1-202ENST00000615342 FANCD2Q9BXW9 1451 aa31.3■■■□□ 2.6
CFC1-202ENST00000615342 CEP164Q9UPV0 1460 aa31.3■■■□□ 2.6
CFC1-202ENST00000615342 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
CFC1-202ENST00000615342 WDR62O43379 1518 aa31.21■■■□□ 2.59
CFC1-202ENST00000615342 PRDM2Q13029 1718 aa31.16■■■□□ 2.58
CFC1-202ENST00000615342 DNAJC5Q9H3Z4 198 aa31.15■■■□□ 2.58
CFC1-202ENST00000615342 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
CFC1-202ENST00000615342 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
CFC1-202ENST00000615342 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
CFC1-202ENST00000615342 ABCC8Q09428 1581 aa30.7■■■□□ 2.5
CFC1-202ENST00000615342 DNMBPQ6XZF7 1577 aa30.69■■■□□ 2.5
CFC1-202ENST00000615342 IFT140Q96RY7 1462 aa30.64■■■□□ 2.49
CFC1-202ENST00000615342 ZNF608Q9ULD9 1512 aaPredicted RBP30.56■■■□□ 2.48
CFC1-202ENST00000615342 POLA1P09884 1462 aaPredicted RBP30.47■■■□□ 2.47
CFC1-202ENST00000615342 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
CFC1-202ENST00000615342 EIF4G3O43432 1585 aaKnown RBP30.43■■■□□ 2.46
CFC1-202ENST00000615342 CUX1P39880 1505 aa30.4■■■□□ 2.46
CFC1-202ENST00000615342 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
CFC1-202ENST00000615342 RAD54L2Q9Y4B4 1467 aa30.36■■■□□ 2.45
CFC1-202ENST00000615342 OSCARQ8IYS5 282 aa30.35■■■□□ 2.45
CFC1-202ENST00000615342 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.45
CFC1-202ENST00000615342 SOGA1O94964 1423 aa30.33■■■□□ 2.45
CFC1-202ENST00000615342 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
CFC1-202ENST00000615342 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
CFC1-202ENST00000615342 CHD1O14646 1710 aa30.13■■■□□ 2.41
CFC1-202ENST00000615342 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.4
CFC1-202ENST00000615342 FBLN2P98095 1184 aa30.07■■■□□ 2.4
CFC1-202ENST00000615342 SNAPC4Q5SXM2 1469 aa30.05■■■□□ 2.4
CFC1-202ENST00000615342 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
CFC1-202ENST00000615342 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
CFC1-202ENST00000615342 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
CFC1-202ENST00000615342 SYNJ1O43426 1573 aa30.04■■■□□ 2.4
CFC1-202ENST00000615342 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
CFC1-202ENST00000615342 GRIN2BQ13224 1484 aa30.02■■■□□ 2.4
CFC1-202ENST00000615342 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
CFC1-202ENST00000615342 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
CFC1-202ENST00000615342 MAGI1Q96QZ7 1491 aaPredicted RBP29.97■■■□□ 2.39
CFC1-202ENST00000615342 ABCA5Q8WWZ7 1642 aa29.95■■■□□ 2.39
CFC1-202ENST00000615342 RIMBP3CA6NJZ7 1639 aa29.94■■■□□ 2.38
CFC1-202ENST00000615342 RIMBP3BA6NNM3 1639 aa29.94■■■□□ 2.38
CFC1-202ENST00000615342 RIMBP3Q9UFD9 1639 aa29.94■■■□□ 2.38
CFC1-202ENST00000615342 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
CFC1-202ENST00000615342 ARHGEF11O15085 1522 aa29.89■■■□□ 2.38
CFC1-202ENST00000615342 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
CFC1-202ENST00000615342 CLASP1Q7Z460 1538 aa29.75■■■□□ 2.35
CFC1-202ENST00000615342 ADAMTS12P58397 1594 aa29.7■■■□□ 2.34
CFC1-202ENST00000615342 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
CFC1-202ENST00000615342 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
CFC1-202ENST00000615342 CYB5RLQ6IPT4 315 aa29.64■■■□□ 2.33
CFC1-202ENST00000615342 ARAP1Q96P48 1450 aa29.62■■■□□ 2.33
CFC1-202ENST00000615342 FHAD1B1AJZ9 1412 aa29.61■■■□□ 2.33
CFC1-202ENST00000615342 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
CFC1-202ENST00000615342 NUP160Q12769 1436 aa29.51■■■□□ 2.31
CFC1-202ENST00000615342 KIF27Q86VH2 1401 aa29.46■■■□□ 2.31
CFC1-202ENST00000615342 IGF1RP08069 1367 aa29.37■■■□□ 2.29
CFC1-202ENST00000615342 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
CFC1-202ENST00000615342 CUL7Q14999 1698 aa29.34■■■□□ 2.29
CFC1-202ENST00000615342 SHROOM2Q13796 1616 aa29.33■■■□□ 2.29
CFC1-202ENST00000615342 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
CFC1-202ENST00000615342 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms