RNA–Protein interactions for RNA: ENST00000614370.4

SRRT-214, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-214ENST00000614370 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
SRRT-214ENST00000614370 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
SRRT-214ENST00000614370 ABCC9O60706 1549 aa32.1■■■□□ 2.73
SRRT-214ENST00000614370 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
SRRT-214ENST00000614370 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
SRRT-214ENST00000614370 NACADO15069 1562 aa30.84■■■□□ 2.53
SRRT-214ENST00000614370 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
SRRT-214ENST00000614370 MYO15BQ96JP2 1530 aa30.69■■■□□ 2.5
SRRT-214ENST00000614370 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
SRRT-214ENST00000614370 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
SRRT-214ENST00000614370 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
SRRT-214ENST00000614370 SCRIBQ14160 1630 aa30■■■□□ 2.39
SRRT-214ENST00000614370 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.39
SRRT-214ENST00000614370 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
SRRT-214ENST00000614370 DNAJC5BQ9UF47 199 aa29.43■■■□□ 2.3
SRRT-214ENST00000614370 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
SRRT-214ENST00000614370 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
SRRT-214ENST00000614370 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
SRRT-214ENST00000614370 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
SRRT-214ENST00000614370 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
SRRT-214ENST00000614370 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
SRRT-214ENST00000614370 ATAD2BQ9ULI0 1458 aa28.51■■■□□ 2.15
SRRT-214ENST00000614370 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
SRRT-214ENST00000614370 SMARCA2P51531 1590 aa28.45■■■□□ 2.14
SRRT-214ENST00000614370 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
SRRT-214ENST00000614370 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
SRRT-214ENST00000614370 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
SRRT-214ENST00000614370 WIZO95785 1651 aa28.22■■■□□ 2.11
SRRT-214ENST00000614370 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
SRRT-214ENST00000614370 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
SRRT-214ENST00000614370 NESP48681 1621 aa27.82■■■□□ 2.04
SRRT-214ENST00000614370 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.03
SRRT-214ENST00000614370 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
SRRT-214ENST00000614370 ERCC6Q03468 1493 aa27.6■■■□□ 2.01
SRRT-214ENST00000614370 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
SRRT-214ENST00000614370 CFTRP13569 1480 aa27.5■■□□□ 1.99
SRRT-214ENST00000614370 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
SRRT-214ENST00000614370 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
SRRT-214ENST00000614370 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
SRRT-214ENST00000614370 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
SRRT-214ENST00000614370 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
SRRT-214ENST00000614370 CUX2O14529 1486 aa27.32■■□□□ 1.96
SRRT-214ENST00000614370 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
SRRT-214ENST00000614370 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
SRRT-214ENST00000614370 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
SRRT-214ENST00000614370 WDR62O43379 1518 aa27.18■■□□□ 1.94
SRRT-214ENST00000614370 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
SRRT-214ENST00000614370 TOPBP1Q92547 1522 aa26.92■■□□□ 1.9
SRRT-214ENST00000614370 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.9
SRRT-214ENST00000614370 ABCC8Q09428 1581 aa26.83■■□□□ 1.89
SRRT-214ENST00000614370 CUX1P39880 1505 aa26.76■■□□□ 1.87
SRRT-214ENST00000614370 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
SRRT-214ENST00000614370 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
SRRT-214ENST00000614370 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
SRRT-214ENST00000614370 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
SRRT-214ENST00000614370 ZNF608Q9ULD9 1512 aaPredicted RBP26.64■■□□□ 1.85
SRRT-214ENST00000614370 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
SRRT-214ENST00000614370 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
SRRT-214ENST00000614370 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
SRRT-214ENST00000614370 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
SRRT-214ENST00000614370 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
SRRT-214ENST00000614370 SOGA1O94964 1423 aa26.53■■□□□ 1.84
SRRT-214ENST00000614370 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
SRRT-214ENST00000614370 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
SRRT-214ENST00000614370 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.821e-9■■■■□ 26.2
SRRT-214ENST00000614370 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.82
SRRT-214ENST00000614370 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
SRRT-214ENST00000614370 ABCA10Q8WWZ4 1543 aa26.38■■□□□ 1.81
SRRT-214ENST00000614370 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
SRRT-214ENST00000614370 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
SRRT-214ENST00000614370 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
SRRT-214ENST00000614370 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
SRRT-214ENST00000614370 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
SRRT-214ENST00000614370 CHD1O14646 1710 aa26.19■■□□□ 1.78
SRRT-214ENST00000614370 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
SRRT-214ENST00000614370 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
SRRT-214ENST00000614370 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
SRRT-214ENST00000614370 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
SRRT-214ENST00000614370 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
SRRT-214ENST00000614370 FBLN2P98095 1184 aa26.02■■□□□ 1.76
SRRT-214ENST00000614370 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
SRRT-214ENST00000614370 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
SRRT-214ENST00000614370 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
SRRT-214ENST00000614370 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
SRRT-214ENST00000614370 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
SRRT-214ENST00000614370 IGF1RP08069 1367 aa25.87■■□□□ 1.73
SRRT-214ENST00000614370 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
SRRT-214ENST00000614370 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
SRRT-214ENST00000614370 CEP170Q5SW79 1584 aa25.83■■□□□ 1.73
SRRT-214ENST00000614370 NUP160Q12769 1436 aa25.82■■□□□ 1.72
SRRT-214ENST00000614370 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
SRRT-214ENST00000614370 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
SRRT-214ENST00000614370 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
SRRT-214ENST00000614370 CUL7Q14999 1698 aa25.82■■□□□ 1.72
SRRT-214ENST00000614370 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
SRRT-214ENST00000614370 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
SRRT-214ENST00000614370 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
SRRT-214ENST00000614370 SHROOM2Q13796 1616 aa25.64■■□□□ 1.7
SRRT-214ENST00000614370 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
SRRT-214ENST00000614370 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms