RNA–Protein interactions for RNA: ENST00000614153.4

COLCA2-205, Transcript of colorectal cancer associated 2, humanhuman

TSL 3 BASIC

Gene COLCA2, Length 1,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-205ENST00000614153 NISCHQ9Y2I1 1504 aa46.31■■■■■ 5
COLCA2-205ENST00000614153 ABCC9O60706 1549 aa41.65■■■■■ 4.26
COLCA2-205ENST00000614153 CCDC180Q9P1Z9 1646 aa41.44■■■■■ 4.22
COLCA2-205ENST00000614153 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
COLCA2-205ENST00000614153 DCAF8L2P0C7V8 631 aa39.35■■■■□ 3.89
COLCA2-205ENST00000614153 NACADO15069 1562 aa39.26■■■■□ 3.88
COLCA2-205ENST00000614153 DNAJC5BQ9UF47 199 aa39.14■■■■□ 3.86
COLCA2-205ENST00000614153 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.81
COLCA2-205ENST00000614153 MYO15BQ96JP2 1530 aa38.67■■■■□ 3.78
COLCA2-205ENST00000614153 UNC13AQ9UPW8 1703 aa38.55■■■■□ 3.76
COLCA2-205ENST00000614153 BICRAQ9NZM4 1560 aa38.38■■■■□ 3.73
COLCA2-205ENST00000614153 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
COLCA2-205ENST00000614153 DCAF1Q9Y4B6 1507 aa38.18■■■■□ 3.7
COLCA2-205ENST00000614153 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
COLCA2-205ENST00000614153 SHROOM4Q9ULL8 1493 aa37.81■■■■□ 3.64
COLCA2-205ENST00000614153 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
COLCA2-205ENST00000614153 CECR2Q9BXF3 1484 aa37.5■■■■□ 3.59
COLCA2-205ENST00000614153 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
COLCA2-205ENST00000614153 NCAPD3P42695 1498 aa36.29■■■■□ 3.4
COLCA2-205ENST00000614153 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
COLCA2-205ENST00000614153 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
COLCA2-205ENST00000614153 SMARCA2P51531 1590 aa36.05■■■■□ 3.36
COLCA2-205ENST00000614153 ERCC6Q03468 1493 aa35.97■■■■□ 3.35
COLCA2-205ENST00000614153 HMGXB3Q12766 1538 aa35.95■■■■□ 3.35
COLCA2-205ENST00000614153 DNAJC5Q9H3Z4 198 aa35.93■■■■□ 3.34
COLCA2-205ENST00000614153 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
COLCA2-205ENST00000614153 BAZ1BQ9UIG0 1483 aaKnown RBP35.85■■■■□ 3.33
COLCA2-205ENST00000614153 CUX2O14529 1486 aa35.83■■■■□ 3.33
COLCA2-205ENST00000614153 NESP48681 1621 aa35.77■■■■□ 3.32
COLCA2-205ENST00000614153 MROH2BQ7Z745 1585 aa35.71■■■■□ 3.31
COLCA2-205ENST00000614153 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.31
COLCA2-205ENST00000614153 LAMC3Q9Y6N6 1575 aa35.42■■■■□ 3.26
COLCA2-205ENST00000614153 PDS5BQ9NTI5 1447 aa35.31■■■■□ 3.24
COLCA2-205ENST00000614153 THOC2Q8NI27 1593 aaKnown RBP35.3■■■■□ 3.24
COLCA2-205ENST00000614153 WIZO95785 1651 aa35.26■■■■□ 3.23
COLCA2-205ENST00000614153 CADPSQ9ULU8 1353 aa35.23■■■■□ 3.23
COLCA2-205ENST00000614153 KIF21AQ7Z4S6 1674 aa35.2■■■■□ 3.23
COLCA2-205ENST00000614153 RSF1Q96T23 1441 aaPredicted RBP34.99■■■■□ 3.19
COLCA2-205ENST00000614153 MRC2Q9UBG0 1479 aa34.97■■■■□ 3.19
COLCA2-205ENST00000614153 WDR62O43379 1518 aa34.84■■■■□ 3.17
COLCA2-205ENST00000614153 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
COLCA2-205ENST00000614153 FANCD2Q9BXW9 1451 aa34.82■■■■□ 3.16
COLCA2-205ENST00000614153 TOP2AP11388 1531 aaKnown RBP34.79■■■■□ 3.16
COLCA2-205ENST00000614153 CFTRP13569 1480 aa34.78■■■■□ 3.16
COLCA2-205ENST00000614153 URB2Q14146 1524 aaKnown RBP34.51■■■■□ 3.12
COLCA2-205ENST00000614153 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
COLCA2-205ENST00000614153 TRIM41Q8WV44 630 aa34.44■■■■□ 3.1
COLCA2-205ENST00000614153 OSCARQ8IYS5 282 aa34.32■■■■□ 3.08
COLCA2-205ENST00000614153 PRDM2Q13029 1718 aa34.27■■■■□ 3.08
COLCA2-205ENST00000614153 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
COLCA2-205ENST00000614153 TOPBP1Q92547 1522 aa34.13■■■■□ 3.05
COLCA2-205ENST00000614153 ZNF608Q9ULD9 1512 aaPredicted RBP34.12■■■■□ 3.05
COLCA2-205ENST00000614153 ABCC8Q09428 1581 aa34.04■■■■□ 3.04
COLCA2-205ENST00000614153 DNMBPQ6XZF7 1577 aa33.97■■■■□ 3.03
COLCA2-205ENST00000614153 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
COLCA2-205ENST00000614153 AQRO60306 1485 aaKnown RBP eCLIP33.84■■■■□ 3.01
COLCA2-205ENST00000614153 POLA1P09884 1462 aaPredicted RBP33.79■■■■□ 3
COLCA2-205ENST00000614153 TARBP1Q13395 1621 aaKnown RBP33.78■■■■□ 3
COLCA2-205ENST00000614153 RIMBP3CA6NJZ7 1639 aa33.75■■■□□ 2.99
COLCA2-205ENST00000614153 RIMBP3BA6NNM3 1639 aa33.75■■■□□ 2.99
COLCA2-205ENST00000614153 RIMBP3Q9UFD9 1639 aa33.75■■■□□ 2.99
COLCA2-205ENST00000614153 RAD54L2Q9Y4B4 1467 aa33.72■■■□□ 2.99
COLCA2-205ENST00000614153 FBLN2P98095 1184 aa33.72■■■□□ 2.99
COLCA2-205ENST00000614153 SOGA1O94964 1423 aa33.7■■■□□ 2.98
COLCA2-205ENST00000614153 ARHGEF11O15085 1522 aa33.66■■■□□ 2.98
COLCA2-205ENST00000614153 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
COLCA2-205ENST00000614153 FGD5Q6ZNL6 1462 aa33.59■■■□□ 2.97
COLCA2-205ENST00000614153 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
COLCA2-205ENST00000614153 CHD1O14646 1710 aa33.58■■■□□ 2.97
COLCA2-205ENST00000614153 CYB5RLQ6IPT4 315 aa33.55■■■□□ 2.96
COLCA2-205ENST00000614153 CUX1P39880 1505 aa33.54■■■□□ 2.96
COLCA2-205ENST00000614153 SNAPC4Q5SXM2 1469 aa33.46■■■□□ 2.95
COLCA2-205ENST00000614153 CHMP7Q8WUX9 453 aaPredicted RBP33.44■■■□□ 2.94
COLCA2-205ENST00000614153 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
COLCA2-205ENST00000614153 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
COLCA2-205ENST00000614153 ARAP1Q96P48 1450 aa33.34■■■□□ 2.93
COLCA2-205ENST00000614153 MAGI1Q96QZ7 1491 aaPredicted RBP33.32■■■□□ 2.92
COLCA2-205ENST00000614153 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
COLCA2-205ENST00000614153 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
COLCA2-205ENST00000614153 TRHP20396 242 aaPredicted RBP33.22■■■□□ 2.91
COLCA2-205ENST00000614153 CLASP1Q7Z460 1538 aa33.22■■■□□ 2.91
COLCA2-205ENST00000614153 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
COLCA2-205ENST00000614153 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
COLCA2-205ENST00000614153 PBRM1Q86U86 1689 aa33.13■■■□□ 2.89
COLCA2-205ENST00000614153 WRNQ14191 1432 aaPredicted RBP eCLIP33.1■■■□□ 2.89
COLCA2-205ENST00000614153 ABCA5Q8WWZ7 1642 aa33.07■■■□□ 2.88
COLCA2-205ENST00000614153 TOP2BQ02880 1626 aa32.96■■■□□ 2.87
COLCA2-205ENST00000614153 BIVM-ERCC5R4GMW8 1640 aa32.92■■■□□ 2.86
COLCA2-205ENST00000614153 GRIN2AQ12879 1464 aa32.92■■■□□ 2.86
COLCA2-205ENST00000614153 ADAMTS12P58397 1594 aa32.85■■■□□ 2.85
COLCA2-205ENST00000614153 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
COLCA2-205ENST00000614153 NUP160Q12769 1436 aa32.79■■■□□ 2.84
COLCA2-205ENST00000614153 CEP170Q5SW79 1584 aa32.78■■■□□ 2.84
COLCA2-205ENST00000614153 ERCC6L2Q5T890 1561 aa32.75■■■□□ 2.83
COLCA2-205ENST00000614153 ERICH3Q5RHP9 1530 aa32.74■■■□□ 2.83
COLCA2-205ENST00000614153 SHROOM2Q13796 1616 aa32.58■■■□□ 2.81
COLCA2-205ENST00000614153 JPH4Q96JJ6 628 aa32.57■■■□□ 2.8
COLCA2-205ENST00000614153 PRG4Q92954 1404 aaPredicted RBP32.55■■■□□ 2.8
COLCA2-205ENST00000614153 IGF1RP08069 1367 aa32.42■■■□□ 2.78
COLCA2-205ENST00000614153 KIF27Q86VH2 1401 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms